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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2674161..2675572- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008101-T1 ID=KYF_008101-T1|Name=KYF_008101-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1412bp|location=Sequence derived from alignment at ch6:2674161..2675572- (Aspergillus niger KYF3)
ATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAATACTA
CCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATTCAGCA
ATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGGAACTA
GTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGACAGCTG
CGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGAGGTCT
ACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGGCCTTTC
TACGGTAAGGATATGAATGCACAACTGGGATTTTCATGACAGCGGCTAAC
AGTGAGTCAATAGCGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCT
CATGGCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCG
ATATGGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAG
CCCTGCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAA
GCAGATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGGCCAACT
ACCCGGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCGAACAGC
TTGTGCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCA
GCTCCTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTT
TTCACGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTG
CAGGACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACT
GCACACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAAT
TCGCCGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATC
CGGGTCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCT
GGCGGCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGG
CCAACGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGAAACTTC
TCCAACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTG
TGCGTCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGT
ACTCCATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGC
ATTGCGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGA
GATGGGAGCCTACACCAAGTGTAGCGCGACCCGCTTTAACGGCTTTTCGG
ACAACCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTC
CTCGAGTACTAG back to topCoding sequence (CDS) from alignment at ch6:2674161..2675572- >KYF_008101-T1 ID=KYF_008101-T1|Name=KYF_008101-T1|organism=Aspergillus niger KYF3|type=CDS|length=2706bp|location=Sequence derived from alignment at ch6:2674161..2675572- (Aspergillus niger KYF3)
CGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAACTC
GGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCTCGA
GACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGACCA
AGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACCTTT
GACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGCCGA
GCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGTTCA
GCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAATTG
GCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGGATC
AGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGCGCC
TTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTGGAT
GTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGTCCT
GAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTGCCG
AACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAACATC
ATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGCCTA
CATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCATCT
TTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCCGCT
AACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTGGGG
GCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGCCAG
CTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCCTAC
ACCAAGTGTAGCGCGACCCGCTTTAACGGCTTTTCGGACAACCACGAGGT
GATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTACTAGA
TGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAATACTAC
CAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATTCAGCAA
TCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGGAACTAG
TCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGACAGCTGC
GCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGAGGTCTA
CCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGGCCTTTCT
ACGCGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAA
CTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCT
CGAGACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGA
CCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACC
TTTGACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGC
CGAGCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGT
TCAGCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAA
TTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGG
ATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGC
GCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTG
GATGTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGT
CCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTG
CCGAACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAAC
ATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGC
CTACATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCA
TCTTTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCC
GCTAACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTG
GGGGCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGC
CAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCC
TACACCAAGTGTAGCGCGACCCGCTTTAACGGCTTTTCGGACAACCACGA
GGTGATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTACT
AGATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAATAC
TACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATTCAG
CAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGGAAC
TAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGACAGC
TGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGAGGT
CTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGGCCTT
TCTACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006596 | polyamine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261V03 |
| DBxref | InterPro:IPR022657 |
| DBxref | InterPro:IPR022653 |
| DBxref | InterPro:IPR022643 |
| DBxref | InterPro:IPR022644 |
| DBxref | InterPro:IPR009006 |
| DBxref | InterPro:IPR029066 |
| DBxref | InterPro:IPR002433 |
| DBxref | InterPro:IPR000183 |
| DBxref | PFAM:PF00278 |
| DBxref | PFAM:PF02784 |
| Product | Ornithine decarboxylase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2674161..2675572 - |
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