You are here

KYF_008214-T1, KYF_008214-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_008214-T1
Unique NameKYF_008214-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2988092..2988861+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_008214-T1 ID=KYF_008214-T1|Name=KYF_008214-T1|organism=Aspergillus niger KYF3|type=mRNA|length=770bp|location=Sequence derived from alignment at ch6:2988092..2988861+ (Aspergillus niger KYF3)
ATGGTCCAAGTATCCTCCTTAGCATTAGTAGGCTACCTCGCACCAGTCCT CGTCACGTTTCTCCTCTTCGTAACATGGTATGTCTTTCCAGTTTGCGCAG AGCAACATACACCACAAATCTCGCCCTTAAATAAAGAAATTTATATTGAA ACGAGATGACACTACAGGCTCATCCTCGGCGCCCGCAGACGTCGTCGCCG TCATCGCCGCTATGGCCCTCAACACCCCTACCCAGACGCCGAAATGGCAG CGCCTGAAGGCCACACTCGGATCGTAATTTCGCAGCAGCTCATCGAGGAG CTGTATCCGCAACTGCGATACAAAGACTGGTTTAAGGAAAATCATATTCA GCAGCAGCAGCAGCATCTATCATCAGGGGCGATATCGCGAGCGAGATCCA CGTCCGGGAATAATTCCGGTGAATCACCAGACAAGAGCAACATCAACACC AGTCAAGATAGAGACAAAGACACGGATGATATAGATACAGATACAGACAG AGACAACCACCGCACGTGCGCAATATGCATGGATGAGTTTGCTGACGATG ACGAGATCCGATCCCTGCCGTGCAGGCATATCTTCCATATGGTGTGTTTG GATCCGTGGGTTACGAAAAGGAATGCGTTTTGTCCGCTGTGTAAGATGTC ACTATGTGGGATGAAGAGAGGGAATGAGAGTGGTGGGGATAGGAGGAGTT GGCCTTGGAGAAGAGAATCGCAGAGGGCGAGTGCCAGGGTGATTTCGGTA CCGGAGGCGGCGGTTATTAG
back to top

Coding sequence (CDS) from alignment at ch6:2988092..2988861+

>KYF_008214-T1 ID=KYF_008214-T1|Name=KYF_008214-T1|organism=Aspergillus niger KYF3|type=CDS|length=1737bp|location=Sequence derived from alignment at ch6:2988092..2988861+ (Aspergillus niger KYF3)
ATGGTCCAAGTATCCTCCTTAGCATTAGTAGGCTACCTCGCACCAGTCCT
CGTCACGTTTCTCCTCTTCGTAACATGGCTCATCCTCGGCGCCCGCAGAC
GTCGTCGCCGTCATCGCCGCTATGGCCCTCAACACCCCTACCCAGACGCC
GAAATGGCAGCGCCTGAAGGCCACACTCGGATCGTAATTTCGCAGCAGCT
CATCGAGGAGCTGTATCCGCAACTGCGATACAAAGACTGGTTTAAGGAAA
ATCATATTCAGCAGCAGCAGCAGCATCTATCATCAGGGGCGATATCGCGA
GCGAGATCCACGTCCGGGAATAATTCCGGTGAATCACCAGACAAGAGCAA
CATCAACACCAGTCAAGATAGAGACAAAGACACGGATGATATAGATACAG
ATACAGACAGAGACAACCACCGCACGTGCGCAATATGCATGGATGAGTTT
GCTGACGATGACGAGATCCGATCCCTGCCGTGCAGGCATATCTTCCATAT
GGAGGAGTTGGCCTTGGAGAAGAGAATCGCAGAGGGCGAGTGCCAGGGTG
ATTTCGGTACCGGAGGCGGCGGTTATTAGATGGTCCAAGTATCCTCCTTA
GCATTAGTAGGCTACCTCGCACCAGTCCTCGTCACGTTTCTCCTCTTCGT
AACATGGCTCATCCTCGGCGCCCGCAGACGTCGTCGCCGTCATCGCCGCT
ATGGCCCTCAACACCCCTACCCAGACGCCGAAATGGCAGCGCCTGAAGGC
CACACTCGGATCGTAATTTCGCAGCAGCTCATCGAGGAGCTGTATCCGCA
ACTGCGATACAAAGACTGGTTTAAGGAAAATCATATTCAGCAGCAGCAGC
AGCATCTATCATCAGGGGCGATATCGCGAGCGAGATCCACGTCCGGGAAT
AATTCCGGTGAATCACCAGACAAGAGCAACATCAACACCAGTCAAGATAG
AGACAAAGACACGGATGATATAGATACAGATACAGACAGAGACAACCACC
GCACGTGCGCAATATGCATGGATGAGTTTGCTGACGATGACGAGATCCGA
TCCCTGCCGTGCAGGCATATCTTCCATATGGAGGAGTTGGCCTTGGAGAA
GAGAATCGCAGAGGGCGAGTGCCAGGGTGATTTCGGTACCGGAGGCGGCG
GTTATTAGATGGTCCAAGTATCCTCCTTAGCATTAGTAGGCTACCTCGCA
CCAGTCCTCGTCACGTTTCTCCTCTTCGTAACATGGCTCATCCTCGGCGC
CCGCAGACGTCGTCGCCGTCATCGCCGCTATGGCCCTCAACACCCCTACC
CAGACGCCGAAATGGCAGCGCCTGAAGGCCACACTCGGATCGTAATTTCG
CAGCAGCTCATCGAGGAGCTGTATCCGCAACTGCGATACAAAGACTGGTT
TAAGGAAAATCATATTCAGCAGCAGCAGCAGCATCTATCATCAGGGGCGA
TATCGCGAGCGAGATCCACGTCCGGGAATAATTCCGGTGAATCACCAGAC
AAGAGCAACATCAACACCAGTCAAGATAGAGACAAAGACACGGATGATAT
AGATACAGATACAGACAGAGACAACCACCGCACGTGCGCAATATGCATGG
ATGAGTTTGCTGACGATGACGAGATCCGATCCCTGCCGTGCAGGCATATC
TTCCATATGGAGGAGTTGGCCTTGGAGAAGAGAATCGCAGAGGGCGAGTG
CCAGGGTGATTTCGGTACCGGAGGCGGCGGTTATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_008214KYF_008214Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008214-T1.exon1KYF_008214-T1.exon1Aspergillus niger KYF3exon
KYF_008214-T1.exon2KYF_008214-T1.exon2Aspergillus niger KYF3exon
KYF_008214-T1.exon3KYF_008214-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_008214-T1.cdsKYF_008214-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_008214-T1KYF_008214-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001841
DBxrefPFAM:PF13639
DBxrefPFAM:PF17123
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2988092..2988861 +