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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4536801..4537890- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008664-T1 ID=KYF_008664-T1|Name=KYF_008664-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1090bp|location=Sequence derived from alignment at ch6:4536801..4537890- (Aspergillus niger KYF3)
ATGCATACTCCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGC
CGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTG
CTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACATATTCCACCATC
GGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTA
CGTTGCCAGCGGCACGTATGAGGAGCAGCTGACCATTGACTACGCTGGCA
ACCTCACCTTGTACGGTGAGACTACCGACACCAGCACATACAAGGACAAT
GTGGTGACCATTACCCACACCATCTCGTCGTCGGATGCCGGCTCTCTCGA
CAAGAGCGCCACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACA
TCAACGTGGAGAATGGATATGGTGAGGGAGCACAGGCTGTAGCGTAAGTA
TGCCGATCTTCCCGATTCATTGAGATTGTTGGGCTAATGGCTTTGCTAGC
CTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGG
TTATCAAGACACTCTCTATGTCAAGGCCGGTACCCAGTATTACTCCAACT
GCATGATCGAGGGTCAGTATTTGTCCAAGCAGCACCATTAGCAAATTGAC
TAACTATTCCAGGCGCGGTCGACTACATCTTCGGCGATGCGTCCGTGTGG
TTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTC
ATCGCGCGAAACCTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCA
ACATCAAGGCTGCTTCGGGAGTCTCTCTCACGGAGGAAGTCTACCTGGGC
CGGCCGTGGCGCGTGCTGGCGCGAGTCATCTACCAGAACTCAGTGTTGTC
GGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGC
CGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACATCTGAT
CGCGAATACGAGACCTCCATTTCTGCTGCGGTTGACAAGACCACAGTGCT
GGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAA back to topCoding sequence (CDS) from alignment at ch6:4536801..4537890- >KYF_008664-T1 ID=KYF_008664-T1|Name=KYF_008664-T1|organism=Aspergillus niger KYF3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch6:4536801..4537890- (Aspergillus niger KYF3)
GCGCGGTCGACTACATCTTCGGCGATGCGTCCGTGTGGTTCGGCGAATGT
GACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTCATCGCGCGAAAC
CTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCAACATCAAGGCTG
CTTCGGGAGTCTCTCTCACGGAGGAAGTCTACCTGGGCCGGCCGTGGCGC
GTGCTGGCGCGAGTCATCTACCAGAACTCAGTGTTGTCGGACATCATCAA
CCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGCCGCTGTATTATG
AATACAACAACTCTGGTGCGGGATCGGACACATCTGATCGCGAATACGAG
ACCTCCATTTCTGCTGCGGTTGACAAGACCACAGTGCTGGGCGAGACTTG
GGGAGACTGGATTGATCGGAGCTACTAACCTTGTCGGAAACGCAGATCAA
CTGGGCTTCTATGGATGCCAATTCAGTGGTTATCAAGACACTCTCTATGT
CAAGGCCGGTACCCAGTATTACTCCAACTGCATGATCGAGGATGCATACT
CCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGC
TCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAG
GGTGTCTGACGGTCGGATCGGATGGAACATATTCCACCATCGGCGACGCG
CTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTACGTTGCCAG
CGGCACGTATGAGGAGCAGCTGACCATTGACTACGCTGGCAACCTCACCT
TGTACGGTGAGACTACCGACACCAGCACATACAAGGACAATGTGGTGACC
ATTACCCACACCATCTCGTCGTCGGATGCCGGCTCTCTCGACAAGAGCGC
CACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACATCAACGTGG
AGAATGGATATGGTGAGGGAGCACAGGCTGTAGCGCGCGGTCGACTACAT
CTTCGGCGATGCGTCCGTGTGGTTCGGCGAATGTGACATTGTGTCTAACG
GCGCCGGTGCCATCACGGCCTCATCGCGCGAAACCTCCTCTGACTCAGGC
TGGTACGCTATCGACAACTGCAACATCAAGGCTGCTTCGGGAGTCTCTCT
CACGGAGGAAGTCTACCTGGGCCGGCCGTGGCGCGTGCTGGCGCGAGTCA
TCTACCAGAACTCAGTGTTGTCGGACATCATCAACCCCAAGGGATGGACG
ACCATGGCAGACGGTGCGACGCCGCTGTATTATGAATACAACAACTCTGG
TGCGGGATCGGACACATCTGATCGCGAATACGAGACCTCCATTTCTGCTG
CGGTTGACAAGACCACAGTGCTGGGCGAGACTTGGGGAGACTGGATTGAT
CGGAGCTACTAACCTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGAT
GCCAATTCAGTGGTTATCAAGACACTCTCTATGTCAAGGCCGGTACCCAG
TATTACTCCAACTGCATGATCGAGGATGCATACTCCATATCTTCTGGGCG
CCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGCTCCGGCAGAGCACATC
AAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGG
ATCGGATGGAACATATTCCACCATCGGCGACGCGCTTGACGCTCTAGGCT
CATCCACTTCGTCCGCTTGCATTTACGTTGCCAGCGGCACGTATGAGGAG
CAGCTGACCATTGACTACGCTGGCAACCTCACCTTGTACGGTGAGACTAC
CGACACCAGCACATACAAGGACAATGTGGTGACCATTACCCACACCATCT
CGTCGTCGGATGCCGGCTCTCTCGACAAGAGCGCCACCGTCAACGTGGTC
TCGGATGGGTTCAGCATGTACAACATCAACGTGGAGAATGGATATGGTGA
GGGAGCACAGGCTGTAGCGCGCGGTCGACTACATCTTCGGCGATGCGTCC
GTGTGGTTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCAC
GGCCTCATCGCGCGAAACCTCCTCTGACTCAGGCTGGTACGCTATCGACA
ACTGCAACATCAAGGCTGCTTCGGGAGTCTCTCTCACGGAGGAAGTCTAC
CTGGGCCGGCCGTGGCGCGTGCTGGCGCGAGTCATCTACCAGAACTCAGT
GTTGTCGGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTG
CGACGCCGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACA
TCTGATCGCGAATACGAGACCTCCATTTCTGCTGCGGTTGACAAGACCAC
AGTGCTGGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAACCTT
GTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGGTTA
TCAAGACACTCTCTATGTCAAGGCCGGTACCCAGTATTACTCCAACTGCA
TGATCGAGGATGCATACTCCATATCTTCTGGGCGCCCTTGCCGCCCTGGC
TGCTACCGCCGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCC
GGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACATAT
TCCACCATCGGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGC
TTGCATTTACGTTGCCAGCGGCACGTATGAGGAGCAGCTGACCATTGACT
ACGCTGGCAACCTCACCTTGTACGGTGAGACTACCGACACCAGCACATAC
AAGGACAATGTGGTGACCATTACCCACACCATCTCGTCGTCGGATGCCGG
CTCTCTCGACAAGAGCGCCACCGTCAACGTGGTCTCGGATGGGTTCAGCA
TGTACAACATCAACGTGGAGAATGGATATGGTGAGGGAGCACAGGCTGTA
GC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030599 | pectinesterase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042545 | cell wall modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:CE8 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR033131 |
| DBxref | InterPro:IPR000070 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF01095 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4536801..4537890 - |
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