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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4538841..4540124+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008665-T1 ID=KYF_008665-T1|Name=KYF_008665-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1284bp|location=Sequence derived from alignment at ch6:4538841..4540124+ (Aspergillus niger KYF3)
ATGACGCTATATCGCAATCTTCTGCTTTTGGCCAGCCTTGGACTGAGCTA
TGCTGCTCCCTCTAAGGTCCAACGTGCCCCTGATTCGTCCCTCCATGCTC
GTGCCGTCTGTACCCCAACCGCAGGAGGCGATTCTTCCACCGACGATGTG
CCCGCCATCACCGAGGCTCTCAGCTCGTGCGGGAACGGGGGCACCATTGT
ATTCCCGGAGGGCAGCACCTACTACCTCAACAGTGTGCTTGACTTGGGCA
ACTGCAGTAATTGCGACATCCAGGTGGAAGGTCTTTTGAAGTTCGCCAGC
GACACCGATTACTGGAGCGGTCGCACCGCCATGATCAGTGTATCCGATGT
GGATGGCCTGAAGCTGCGCTCATTGACTGGGTCGGGTGTCATCGATGGCA
ATGGCCAGGATGCGTACGTGATCACCATTCTCGGAAGCAAGCCTCCCAGT
CCATTTAGCTGACCGATGCAATTTAGGTGGGATCTCTTTGCGAGTGACAG
CAGTTACTCACGCCCAACGCTCCTGTACATCACTGGCGGCAGCAACCTCG
AAATCTCCGGGCTGCGTCAGAAGAACCCACCCAACGTGTTCAACTCAGTC
AAGGGTGGCGCCACTAACGTCGTCTTCTCCAACCTGAAGATGGATGCAAA
CTCCAAGTCAGACAACCCGCCCAAGAACACTGATGGCTTCGACATCGGCG
AGAGTACCTATGTAACCATCACTGAGGTCACCGTCGTCAACGATGATGAC
TGTGTGGCCCTGAAGCCCAGCTCCAACTACGTGACCGTCGACACCATCAG
CTGCACCGGCTCCCATGGCATTTCCGTGGGGTCGCTGGGCAAGTCCAGCG
ACGACTCGGTCAAGAATATCTATGTCACGGGCGCAACCATGATCAACTCC
ACCAAAGCCGCCGGAATCAAGACTTATCCGAGTGGAGGCGACCACGGCAC
TTCCACGGTCAGCAATGTGACGTTCACCGATTTCACCGTAGACAACTCCG
ACTATGCCTTCCAGATCCAGAGTTGTTATGGCGAGGACGATGACTACTGC
GAGGAGAACCCGGGCAACGCCAAGCTGACCGATATTGTCGTCTCGAGCTT
CAGCGGCACAACCAGTGACAAGTACGACCCGGTTGTGGCCAACATCGACT
GCGGTTCGGATGGAACGTGTGGCATCTCCATCAGTGGGTTCGATGTGAAG
GCGCCGTCGGGCAAGTCTGAAGTGCTGTGCGCCAACACCCCGTCTGACTT
GGGCGTCACCTGCACTTCAGGAGCATCGGGCTAA back to topCoding sequence (CDS) from alignment at ch6:4538841..4540124+ >KYF_008665-T1 ID=KYF_008665-T1|Name=KYF_008665-T1|organism=Aspergillus niger KYF3|type=CDS|length=2442bp|location=Sequence derived from alignment at ch6:4538841..4540124+ (Aspergillus niger KYF3)
ATGACGCTATATCGCAATCTTCTGCTTTTGGCCAGCCTTGGACTGAGCTA
TGCTGCTCCCTCTAAGGTCCAACGTGCCCCTGATTCGTCCCTCCATGCTC
GTGCCGTCTGTACCCCAACCGCAGGAGGCGATTCTTCCACCGACGATGTG
CCCGCCATCACCGAGGCTCTCAGCTCGTGCGGGAACGGGGGCACCATTGT
ATTCCCGGAGGGCAGCACCTACTACCTCAACAGTGTGCTTGACTTGGGCA
ACTGCAGTAATTGCGACATCCAGGTGGAAGGTCTTTTGAAGTTCGCCAGC
GACACCGATTACTGGAGCGGTCGCACCGCCATGATCAGTGTATCCGATGT
GGATGGCCTGAAGCTGCGCTCATTGACTGGGTCGGGTGTCATCGATGGCA
ATGGCCAGGATGCGTGGGATCTCTTTGCGAGTGACAGCAGTTACTCACGC
CCAACGCTCCTGTACATCACTGGCGGCAGCAACCTCGAAATCTCCGGGCT
GCGTCAGAAGAACCCACCCAACGTGTTCAACTCAGTCAAGGGTGGCGCCA
CTAACGTCGTCTTCTCCAACCTGAAGATGGATGCAAACTCCAAGTCAGAC
AACCCGCCCAAGAACACTGATGGCTTCGACATCGGCGAGAGTACCTATGT
AACCATCACTGAGGTCACCGTCGTCAACGATGATGACTGTGTGGCCCTGA
AGCCCAGCTCCAACTACGTGACCGTCGACACCATCAGCTGCACCGGCTCC
CATGGCATTTCCGTGGGGTCGCTGGGCAAGTCCAGCGACGACTCGGTCAA
GAATATCTATGTCACGGGCGCAACCATGATCAACTCCACCAAAGCCGCCG
GAATCAAGACTTATCCGAGTGGAGGCGACCACGGCACTTCCACGGTCAGC
AATGTGACGTTCACCGATTTCACCGTAGACAACTCCGACTATGCCTTCCA
GATCCAGAGTTGTTATGGCGAGGACGATGACTACTGCGAGGAGAACCCGG
GCAACGCCAAGCTGACCGATATTGTCGTCTCGAGCTTCAGCGGCACAACC
AGTGACAAGTACGACCCGGTTGTGGCCAACATCGACTGCGGTTCGGATGG
AACGTGTGGCATCTCCATCAGTGGGTTCGATGTGAAGGCGCCGTCGGGCA
AGTCTGAAGTGCTGTGCGCCAACACCCCGTCTGACTTGGGCGTCACCTGC
ACTTCAGGAGCATCGGGCTAAATGACGCTATATCGCAATCTTCTGCTTTT
GGCCAGCCTTGGACTGAGCTATGCTGCTCCCTCTAAGGTCCAACGTGCCC
CTGATTCGTCCCTCCATGCTCGTGCCGTCTGTACCCCAACCGCAGGAGGC
GATTCTTCCACCGACGATGTGCCCGCCATCACCGAGGCTCTCAGCTCGTG
CGGGAACGGGGGCACCATTGTATTCCCGGAGGGCAGCACCTACTACCTCA
ACAGTGTGCTTGACTTGGGCAACTGCAGTAATTGCGACATCCAGGTGGAA
GGTCTTTTGAAGTTCGCCAGCGACACCGATTACTGGAGCGGTCGCACCGC
CATGATCAGTGTATCCGATGTGGATGGCCTGAAGCTGCGCTCATTGACTG
GGTCGGGTGTCATCGATGGCAATGGCCAGGATGCGTGGGATCTCTTTGCG
AGTGACAGCAGTTACTCACGCCCAACGCTCCTGTACATCACTGGCGGCAG
CAACCTCGAAATCTCCGGGCTGCGTCAGAAGAACCCACCCAACGTGTTCA
ACTCAGTCAAGGGTGGCGCCACTAACGTCGTCTTCTCCAACCTGAAGATG
GATGCAAACTCCAAGTCAGACAACCCGCCCAAGAACACTGATGGCTTCGA
CATCGGCGAGAGTACCTATGTAACCATCACTGAGGTCACCGTCGTCAACG
ATGATGACTGTGTGGCCCTGAAGCCCAGCTCCAACTACGTGACCGTCGAC
ACCATCAGCTGCACCGGCTCCCATGGCATTTCCGTGGGGTCGCTGGGCAA
GTCCAGCGACGACTCGGTCAAGAATATCTATGTCACGGGCGCAACCATGA
TCAACTCCACCAAAGCCGCCGGAATCAAGACTTATCCGAGTGGAGGCGAC
CACGGCACTTCCACGGTCAGCAATGTGACGTTCACCGATTTCACCGTAGA
CAACTCCGACTATGCCTTCCAGATCCAGAGTTGTTATGGCGAGGACGATG
ACTACTGCGAGGAGAACCCGGGCAACGCCAAGCTGACCGATATTGTCGTC
TCGAGCTTCAGCGGCACAACCAGTGACAAGTACGACCCGGTTGTGGCCAA
CATCGACTGCGGTTCGGATGGAACGTGTGGCATCTCCATCAGTGGGTTCG
ATGTGAAGGCGCCGTCGGGCAAGTCTGAAGTGCTGTGCGCCAACACCCCG
TCTGACTTGGGCGTCACCTGCACTTCAGGAGCATCGGGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4538841..4540124 + |
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