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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2027773..2029083+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_009358-T1 ID=KYF_009358-T1|Name=KYF_009358-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1311bp|location=Sequence derived from alignment at ch7:2027773..2029083+ (Aspergillus niger KYF3)
ATGACCTGGTCCACGTCCTTTCTCGTGGCTACTTCTTTGCTCTCCATCAT
CAACTCGGTCCATGCTCACCTAACAGGATCTGTTGGACCCCTGACCTCCG
TTATAGATAAGGCCGCTGTGAAGACCTGCAACGTCTGCGACTACGGAGCC
AGCTCGGACAACACCACCGGTGTGGGACAGCCCATTATCGACGCCTTCAC
CGACTGCGGTAGCGGTGGTCTCATTCACGTCCCTGAGGGTGACTATCTTT
TGAAAGACTGGGTCTCTTCGGAAAACGGCTCCGCGTGGTCTATCCAGCTC
GATGGCGTGCTCCACTGGGACTCTTCGCCTTCCGCCCAGTCGTACATATT
CGCGATAACCGGTGGCAGTGACTCTGAGCTTTCTAGTTCAAATGCAACGG
GTGCAATTCAAGGTAGCGGTTACCTTTACCACCGACATAATACGTACACT
AGTCCCCGGATGCTGTACATTTCCGGGTGTCGGATTGGACCGTTCATGAC
CTGGTATTGGTCAACTCGCCTATGCCCCACTTTGTCATTGACGGCGGTTA
CAATGGAGAAGCGTACAATATGGCTATCTGTGGTGGTGATCACGGTGGTC
TGGATGGCATTGATTTGTACGGTGGCAACATCTGGATTCATTTAGTGCCG
CTTCTCCTGAACGTGCATTCGATTTCAGGAAACGCTAATGCGACGGCAGG
TAATGGTCACCAACAAGGATGAATGTGTCACTAGCAAGGTAGGTGGATCG
CATTACCTCGCAACTGCGGATGTACTAATCCAAACTGCAACAGACCAAAC
TCCCACAACTTCCTGATCGAGAATATTTACTGCAACCCCAGTGGCGGATG
CGCCATCGGATCCCTGGGTTCCAGTGTCAACGTCACCAACATCCTCTACC
GCAACGTCTACACCTGGGACTCGAACCAAATGATGATGATCAAGACCAAC
GGTGGCTTAGGCAATGTATCCAACATAGTGTTTGAGAATTTCATCGGTAC
ATAACCTTATATCTTCCTTACCCTTCCACGACACACAACCTAATGATAGA
ATAGGCCACGGAAACGTCAACTCCCTCGACCTCGATAGTTACTGGAGCAG
CATGAACGCTATCGACGGCGTCGGCATCTACTATCACAACATCACAATTT
ATAATTGGACGGGGACCGCCATCGACGGTGAAACTCGGCCGCCTATTCGG
GTCATCTGCCCTGAAGACATGCCCTGTACCGAGATCACGCTCGTCCAGAT
TGACTTGTTGGTTGAGGAAGGTCGTTACGATGAATACTACTGCGCGATTG
CTTGCGGATAG back to topCoding sequence (CDS) from alignment at ch7:2027773..2029083+ >KYF_009358-T1 ID=KYF_009358-T1|Name=KYF_009358-T1|organism=Aspergillus niger KYF3|type=CDS|length=5085bp|location=Sequence derived from alignment at ch7:2027773..2029083+ (Aspergillus niger KYF3)
ATGACCTGGTCCACGTCCTTTCTCGTGGCTACTTCTTTGCTCTCCATCAT
CAACTCGGTCCATGCTCACCTAACAGGATCTGTTGGACCCCTGACCTCCG
TTATAGATAAGGCCGCTGTGAAGACCTGCAACGTCTGCGACTACGGAGCC
AGCTCGGACAACACCACCGGTGTGGGACAGCCCATTATCGACGCCTTCAC
CGACTGCGGTAGCGGTGGTCTCATTCACGTCCCTGAGGGTGACTATCTTT
TGAAAGACTGGGTCTCTTCGGAAAACGGCTCCGCGTGGTCTATCCAGCTC
GATGGCGTGCTCCACTGGGACTCTTCGCCTTCCGCCCAGTCGTACATATT
CGCGATAACCGGTGGCATTCAAATGCAACGGGTGCAATTCAAGTCCCCGG
ATGCTGTACATTTCCGGGTGTCGGATTGGACCGTTCATGACCTGGTATTG
GTCAACTCGCCTATGCCCCACTTTGTCATTGACGGCGGTTACAATGGAGA
AGCGTACAATATGGCTATCTGTGGTGGTGATCACGGTGGTCTGGATGGCA
TTGATTTACCAAACTCCCACAACTTCCTGATCGAGAATATTTACTGCAAC
CCCAGTGGCGGATGCGCCATCGGATCCCTGGGTTCCAGTGTCAACGTCAC
CAACATCCTCTACCGCAACGTCTACACCTGGGACTCGAACCAAATGATGA
TGATCAAGACCAACGGTGGCTTAGGCAATGTATCCAACATAGTGTTTGAG
AATTTCATCGGCCACGGAAACGTCAACTCCCTCGACCTCGATAGTTACTG
GAGCAGCATGAACGCTATCGACGGCGTCGGCATCTACTATCACAACATCA
CAATTTATAATTGGACGGGGACCGCCATCGACGGTGAAACTCGGCCGCCT
ATTCGGGTCATCTGCCCTGAAGACATGCCCTGTACCGAGATCACGCTCGT
CCAGATTGACTTGTTGGTTGAGGAAGGTCGTTACGATGAATACTACTGCG
CGATTGCTTGCGGATAGATGACCTGGTCCACGTCCTTTCTCGTGGCTACT
TCTTTGCTCTCCATCATCAACTCGGTCCATGCTCACCTAACAGGATCTGT
TGGACCCCTGACCTCCGTTATAGATAAGGCCGCTGTGAAGACCTGCAACG
TCTGCGACTACGGAGCCAGCTCGGACAACACCACCGGTGTGGGACAGCCC
ATTATCGACGCCTTCACCGACTGCGGTAGCGGTGGTCTCATTCACGTCCC
TGAGGGTGACTATCTTTTGAAAGACTGGGTCTCTTCGGAAAACGGCTCCG
CGTGGTCTATCCAGCTCGATGGCGTGCTCCACTGGGACTCTTCGCCTTCC
GCCCAGTCGTACATATTCGCGATAACCGGTGGCATTCAAATGCAACGGGT
GCAATTCAAGTCCCCGGATGCTGTACATTTCCGGGTGTCGGATTGGACCG
TTCATGACCTGGTATTGGTCAACTCGCCTATGCCCCACTTTGTCATTGAC
GGCGGTTACAATGGAGAAGCGTACAATATGGCTATCTGTGGTGGTGATCA
CGGTGGTCTGGATGGCATTGATTTACCAAACTCCCACAACTTCCTGATCG
AGAATATTTACTGCAACCCCAGTGGCGGATGCGCCATCGGATCCCTGGGT
TCCAGTGTCAACGTCACCAACATCCTCTACCGCAACGTCTACACCTGGGA
CTCGAACCAAATGATGATGATCAAGACCAACGGTGGCTTAGGCAATGTAT
CCAACATAGTGTTTGAGAATTTCATCGGCCACGGAAACGTCAACTCCCTC
GACCTCGATAGTTACTGGAGCAGCATGAACGCTATCGACGGCGTCGGCAT
CTACTATCACAACATCACAATTTATAATTGGACGGGGACCGCCATCGACG
GTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGACATGCCCTGT
ACCGAGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGAAGGTCGTTA
CGATGAATACTACTGCGCGATTGCTTGCGGATAGATGACCTGGTCCACGT
CCTTTCTCGTGGCTACTTCTTTGCTCTCCATCATCAACTCGGTCCATGCT
CACCTAACAGGATCTGTTGGACCCCTGACCTCCGTTATAGATAAGGCCGC
TGTGAAGACCTGCAACGTCTGCGACTACGGAGCCAGCTCGGACAACACCA
CCGGTGTGGGACAGCCCATTATCGACGCCTTCACCGACTGCGGTAGCGGT
GGTCTCATTCACGTCCCTGAGGGTGACTATCTTTTGAAAGACTGGGTCTC
TTCGGAAAACGGCTCCGCGTGGTCTATCCAGCTCGATGGCGTGCTCCACT
GGGACTCTTCGCCTTCCGCCCAGTCGTACATATTCGCGATAACCGGTGGC
ATTCAAATGCAACGGGTGCAATTCAAGTCCCCGGATGCTGTACATTTCCG
GGTGTCGGATTGGACCGTTCATGACCTGGTATTGGTCAACTCGCCTATGC
CCCACTTTGTCATTGACGGCGGTTACAATGGAGAAGCGTACAATATGGCT
ATCTGTGGTGGTGATCACGGTGGTCTGGATGGCATTGATTTACCAAACTC
CCACAACTTCCTGATCGAGAATATTTACTGCAACCCCAGTGGCGGATGCG
CCATCGGATCCCTGGGTTCCAGTGTCAACGTCACCAACATCCTCTACCGC
AACGTCTACACCTGGGACTCGAACCAAATGATGATGATCAAGACCAACGG
TGGCTTAGGCAATGTATCCAACATAGTGTTTGAGAATTTCATCGGCCACG
GAAACGTCAACTCCCTCGACCTCGATAGTTACTGGAGCAGCATGAACGCT
ATCGACGGCGTCGGCATCTACTATCACAACATCACAATTTATAATTGGAC
GGGGACCGCCATCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCC
CTGAAGACATGCCCTGTACCGAGATCACGCTCGTCCAGATTGACTTGTTG
GTTGAGGAAGGTCGTTACGATGAATACTACTGCGCGATTGCTTGCGGATA
GATGACCTGGTCCACGTCCTTTCTCGTGGCTACTTCTTTGCTCTCCATCA
TCAACTCGGTCCATGCTCACCTAACAGGATCTGTTGGACCCCTGACCTCC
GTTATAGATAAGGCCGCTGTGAAGACCTGCAACGTCTGCGACTACGGAGC
CAGCTCGGACAACACCACCGGTGTGGGACAGCCCATTATCGACGCCTTCA
CCGACTGCGGTAGCGGTGGTCTCATTCACGTCCCTGAGGGTGACTATCTT
TTGAAAGACTGGGTCTCTTCGGAAAACGGCTCCGCGTGGTCTATCCAGCT
CGATGGCGTGCTCCACTGGGACTCTTCGCCTTCCGCCCAGTCGTACATAT
TCGCGATAACCGGTGGCATTCAAATGCAACGGGTGCAATTCAAGTCCCCG
GATGCTGTACATTTCCGGGTGTCGGATTGGACCGTTCATGACCTGGTATT
GGTCAACTCGCCTATGCCCCACTTTGTCATTGACGGCGGTTACAATGGAG
AAGCGTACAATATGGCTATCTGTGGTGGTGATCACGGTGGTCTGGATGGC
ATTGATTTACCAAACTCCCACAACTTCCTGATCGAGAATATTTACTGCAA
CCCCAGTGGCGGATGCGCCATCGGATCCCTGGGTTCCAGTGTCAACGTCA
CCAACATCCTCTACCGCAACGTCTACACCTGGGACTCGAACCAAATGATG
ATGATCAAGACCAACGGTGGCTTAGGCAATGTATCCAACATAGTGTTTGA
GAATTTCATCGGCCACGGAAACGTCAACTCCCTCGACCTCGATAGTTACT
GGAGCAGCATGAACGCTATCGACGGCGTCGGCATCTACTATCACAACATC
ACAATTTATAATTGGACGGGGACCGCCATCGACGGTGAAACTCGGCCGCC
TATTCGGGTCATCTGCCCTGAAGACATGCCCTGTACCGAGATCACGCTCG
TCCAGATTGACTTGTTGGTTGAGGAAGGTCGTTACGATGAATACTACTGC
GCGATTGCTTGCGGATAGATGACCTGGTCCACGTCCTTTCTCGTGGCTAC
TTCTTTGCTCTCCATCATCAACTCGGTCCATGCTCACCTAACAGGATCTG
TTGGACCCCTGACCTCCGTTATAGATAAGGCCGCTGTGAAGACCTGCAAC
GTCTGCGACTACGGAGCCAGCTCGGACAACACCACCGGTGTGGGACAGCC
CATTATCGACGCCTTCACCGACTGCGGTAGCGGTGGTCTCATTCACGTCC
CTGAGGGTGACTATCTTTTGAAAGACTGGGTCTCTTCGGAAAACGGCTCC
GCGTGGTCTATCCAGCTCGATGGCGTGCTCCACTGGGACTCTTCGCCTTC
CGCCCAGTCGTACATATTCGCGATAACCGGTGGCATTCAAATGCAACGGG
TGCAATTCAAGTCCCCGGATGCTGTACATTTCCGGGTGTCGGATTGGACC
GTTCATGACCTGGTATTGGTCAACTCGCCTATGCCCCACTTTGTCATTGA
CGGCGGTTACAATGGAGAAGCGTACAATATGGCTATCTGTGGTGGTGATC
ACGGTGGTCTGGATGGCATTGATTTACCAAACTCCCACAACTTCCTGATC
GAGAATATTTACTGCAACCCCAGTGGCGGATGCGCCATCGGATCCCTGGG
TTCCAGTGTCAACGTCACCAACATCCTCTACCGCAACGTCTACACCTGGG
ACTCGAACCAAATGATGATGATCAAGACCAACGGTGGCTTAGGCAATGTA
TCCAACATAGTGTTTGAGAATTTCATCGGCCACGGAAACGTCAACTCCCT
CGACCTCGATAGTTACTGGAGCAGCATGAACGCTATCGACGGCGTCGGCA
TCTACTATCACAACATCACAATTTATAATTGGACGGGGACCGCCATCGAC
GGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGACATGCCCTG
TACCGAGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGAAGGTCGTT
ACGATGAATACTACTGCGCGATTGCTTGCGGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2027773..2029083 + |
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