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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2947804..2948789+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_009673-T1 ID=KYF_009673-T1|Name=KYF_009673-T1|organism=Aspergillus niger KYF3|type=mRNA|length=986bp|location=Sequence derived from alignment at ch7:2947804..2948789+ (Aspergillus niger KYF3)
ATGACAGGCTTCGATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGC
GAAGGGAGTCCCTCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGG
GATGTATATACGACAATGGCGTTGTGGTAGGTACCTCCGGAGCAACCCAA
CAAGCTCCCTAGTACCCAAGACGACGATCACGAACTCACCACATCTGGCA
TAACCACAGATTGCAGCAGATACCAGAGCCACCAGCGGCCCGATAGTAGC
AGACAAGGTAAGCACCGCTTTTCCCAGGACATTCACACCTATCTCCAATA
ACCCAACTCAACAACTAACACACTACCCCCCACACCTCCAGAACTGCGAG
AAACTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGCCGGAACGGC
CGCCGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACATCGAACTGC
ACGCACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGCATGACGATG
CTGAAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGCCTACCTGGT
TGTGGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCGTCCACGCCC
ACGGATCCACCGACAAGCTTCCCTACGTGACCATGGGATCAGGTTCTCTG
GCCGCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCTGGACCGTGA
GGGCGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTATCTTCAACG
ATCTGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAGAAGGACAAG
CCTACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCGTGGCGAGAA
GGAGCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATTTGAACCAGA
AGATCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTTGAGGAGGCG
TCTGGTGATCCTAATTTGATGGAGGTGGATGTCTAA back to topCoding sequence (CDS) from alignment at ch7:2947804..2948789+ >KYF_009673-T1 ID=KYF_009673-T1|Name=KYF_009673-T1|organism=Aspergillus niger KYF3|type=CDS|length=2457bp|location=Sequence derived from alignment at ch7:2947804..2948789+ (Aspergillus niger KYF3)
ATGACAGGCTTCGATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGC
GAAGGGAGTCCCTCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGG
GATGTATATACGACAATGGCGTTGTGATTGCAGCAGATACCAGAGCCACC
AGCGGCCCGATAGTAGCAGACAAGAACTGCGAGAAACTACACTACATCGC
GCCCAAGATCTGGTGCGCCGGAGCCGGAACGGCCGCCGACACCGAGTTCA
CGACGGCGTTGATCAGCTCGAACATCGAACTGCACGCACTTTCGACGGGC
CGGCCCCCACGCGTAATCACCTGCATGACGATGCTGAAGCAGCACCTATT
CCGATACCAAGGCCACATCGGCGCCTACCTGGTTGTGGCGGGTGTCGATC
CCACCGGCATTGGTCTTTTCACCGTCCACGCCCACGGATCCACCGACAAG
CTTCCCTACGTGACCATGGGATCAGGTTCTCTGGCCGCGATGTCGGTGTT
CGAGTCGACATGGAAGCCGAATCTGGACCGTGAGGGCGCGATCGCCCTGT
GCGCGGAGGCCATCAAGGCCGGTATCTTCAACGATCTGGGATCCGGTAGC
AATGTCGATGTTTGCGTCATTGAGAAGGACAAGCCTACGCAGTTGCTGCG
GAACTACATCAGGCCTAATGAGCGTGGCGAGAAGGAGCGCAATTACCGCT
TCCCCAAGGGTACTACGGCTTATTTGAACCAGAAGATCATCAGCAAGGAG
GATATGCGGAAGTATATCTCTGTTGAGGAGGCGTCTGGTGATCCTAATTT
GATGGAGGTGGATGTCTAAATGACAGGCTTCGATTTCTCCAACTACAACC
GTAACGCGGCTCTCCACGCGAAGGGAGTCCCTCTTCCCAAAGCCACCAGC
ACCGGTACCACCATCGTGGGATGTATATACGACAATGGCGTTGTGATTGC
AGCAGATACCAGAGCCACCAGCGGCCCGATAGTAGCAGACAAGAACTGCG
AGAAACTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGCCGGAACG
GCCGCCGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACATCGAACT
GCACGCACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGCATGACGA
TGCTGAAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGCCTACCTG
GTTGTGGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCGTCCACGC
CCACGGATCCACCGACAAGCTTCCCTACGTGACCATGGGATCAGGTTCTC
TGGCCGCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCTGGACCGT
GAGGGCGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTATCTTCAA
CGATCTGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAGAAGGACA
AGCCTACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCGTGGCGAG
AAGGAGCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATTTGAACCA
GAAGATCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTTGAGGAGG
CGTCTGGTGATCCTAATTTGATGGAGGTGGATGTCTAAATGACAGGCTTC
GATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGCGAAGGGAGTCCC
TCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGGGATGTATATACG
ACAATGGCGTTGTGATTGCAGCAGATACCAGAGCCACCAGCGGCCCGATA
GTAGCAGACAAGAACTGCGAGAAACTACACTACATCGCGCCCAAGATCTG
GTGCGCCGGAGCCGGAACGGCCGCCGACACCGAGTTCACGACGGCGTTGA
TCAGCTCGAACATCGAACTGCACGCACTTTCGACGGGCCGGCCCCCACGC
GTAATCACCTGCATGACGATGCTGAAGCAGCACCTATTCCGATACCAAGG
CCACATCGGCGCCTACCTGGTTGTGGCGGGTGTCGATCCCACCGGCATTG
GTCTTTTCACCGTCCACGCCCACGGATCCACCGACAAGCTTCCCTACGTG
ACCATGGGATCAGGTTCTCTGGCCGCGATGTCGGTGTTCGAGTCGACATG
GAAGCCGAATCTGGACCGTGAGGGCGCGATCGCCCTGTGCGCGGAGGCCA
TCAAGGCCGGTATCTTCAACGATCTGGGATCCGGTAGCAATGTCGATGTT
TGCGTCATTGAGAAGGACAAGCCTACGCAGTTGCTGCGGAACTACATCAG
GCCTAATGAGCGTGGCGAGAAGGAGCGCAATTACCGCTTCCCCAAGGGTA
CTACGGCTTATTTGAACCAGAAGATCATCAGCAAGGAGGATATGCGGAAG
TATATCTCTGTTGAGGAGGCGTCTGGTGATCCTAATTTGATGGAGGTGGA
TGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005839 | proteasome core complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051603 | proteolysis involved in cellular protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004298 | threonine-type endopeptidase activity |
| GO:0004175 | endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092641M3 |
| Note | MEROPS:MER0000542 |
| DBxref | InterPro:IPR023333 |
| DBxref | InterPro:IPR024689 |
| DBxref | InterPro:IPR001353 |
| DBxref | InterPro:IPR029055 |
| DBxref | InterPro:IPR000243 |
| DBxref | PFAM:PF12465 |
| DBxref | PFAM:PF00227 |
| Product | proteasome core particle subunit beta 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2947804..2948789 + |
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