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KYF_010398-T1, KYF_010398-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_010398-T1
Unique NameKYF_010398-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1138480..1139708+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_010398-T1 ID=KYF_010398-T1|Name=KYF_010398-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1229bp|location=Sequence derived from alignment at ch8:1138480..1139708+ (Aspergillus niger KYF3)
ATGAATACCATCGACGCAACAGAACACTACGAAACCAGCGCCCACGGTAC
GTCCACCAACCACATACATCCATCACAATCTCATCCCCCTCCCAATTCCA
ACTTCTACCCTACAAACTAACAAGACGAAATATAGACCGGCCCCCCTCCC
TCCTAACCATCATCCTCGACACCAACCCACACGCCTGGGCACTCCTCAAC
CCCTCCCTTCCCCTCTCCACCGCCATCGCCAACATCCTCGTCTTCATCAA
CGCCCACCTAGCATGCAACTACGCGAACGAAGTAGCCGTGGTATCCTCAC
ACACCTCTCAAGCAACATGGCTCTACCCCGTCGAAAAAGCCACCACCACC
ACCACCGCCAATAACCTAGACTCCGACGGCGACATCTCCATGCGCTCCCA
ACAACCACCACCACCCACTCACACCAACATAAACAAATACCGCCCCTTCC
GCATCGTCGAAGAACAAGTCTCCACGCACCTCCACAACCTAATGTCCCAA
ACCACCCCAGAAACCCTCCAATCCACCACCTCAACTATGATGGCCGGCGC
GCTTACCCTAGCACTAAGCCACATCAACCGCCGCACGTTAGCATGGAATG
AAGCGCACGGGGGAGATATCGACACGACAAACCCCAATGACCCATCTTCC
ACATCCTCCTCATCACATAATACAAAGGGTACTGCGGAATCAACCCTCCA
ATCACGCATCCTCATTCTCTCTGTGTCAAGCTCCACCGGTTCAGCGCATC
AATATATCCCCATCATGAATGCTATATTCGCTTGCCAGAGGCTGCATATT
CCGATTGATGTATGTAAGGTGTCTGGCGATGCGGTATTCTTGCAGCAGGC
GTCGGATGCGACCAAGGGAGTGTATATGGCGTTGGATGAGCCGAAGGGAC
TATTGCAGTACTTAATGATGGCGTTTTTGCCGGATCAGAGGAGTAGACGC
CATTTGGTGCTGCCTACAAGAGTGGATGTGGATTTCCGGGCGGCGTGCTT
TTGTCATCGGAGGGTTGTGGACGTGGGGTTTGTGTGTTCGATTTGTTTGA
GTATCTTCTGTGAGCCGTTGGGGGATGGGGTGTGTTTGACTTGTGGGAGT
CGGTTGGATGTTAGTGATTATGGGGCTAAGCCGGCGGTGGTGGCTAGAAA
GAAGAAGAAGAAGAAGGTTAAGGGGAATGGGATGTCTGCGGCGGGGACGC
CTACGCCTACACCGACGCCGGGGCCGTGA
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Coding sequence (CDS) from alignment at ch8:1138480..1139708+

>KYF_010398-T1 ID=KYF_010398-T1|Name=KYF_010398-T1|organism=Aspergillus niger KYF3|type=CDS|length=2280bp|location=Sequence derived from alignment at ch8:1138480..1139708+ (Aspergillus niger KYF3)
ATGAATACCATCGACGCAACAGAACACTACGAAACCAGCGCCCACGACCG
GCCCCCCTCCCTCCTAACCATCATCCTCGACACCAACCCACACGCCTGGG
CACTCCTCAACCCCTCCCTTCCCCTCTCCACCGCCATCGCCAACATCCTC
GTCTTCATCAACGCCCACCTAGCATGCAACTACGCGAACGAAGTAGCCGT
GGTATCCTCACACACCTCTCAAGCAACATGGCTCTACCCCGTCGAAAAAG
CCACCACCACCACCACCGCCAATAACCTAGACTCCGACGGCGACATCTCC
ATGCGCTCCCAACAACCACCACCACCCACTCACACCAACATAAACAAATA
CCGCCCCTTCCGCATCGTCGAAGAACAAGTCTCCACGCACCTCCACAACC
TAATGTCCCAAACCACCCCAGAAACCCTCCAATCCACCACCTCAACTATG
ATGGCCGGCGCGCTTACCCTAGCACTAAGCCACATCAACCGCCGCACGTT
AGCATGGAATGAAGCGCACGGGGGAGATATCGACACGACAAACCCCAATG
ACCCATCTTCCACATCCTCCTCATCACATAATACAAAGGGTACTGCGGAA
TCAACCCTCCAATCACGCATCCTCATTCTCTCTGTGTCAAGCTCCACCGG
TTCAGCGCATCAATATATCCCCATCATGAATGCTATATTCGCTTGCCAGA
GGCTGCATATTCCGATTGATGTATGTAAGGTGTCTGGCGATGCGGTATTC
TTGCAGCAGGCGTCGGATGCGACCAAGGGAGTGTATATGGCGTTGGATGA
GCCGAAGGGACTATTGCAGTACTTAATGATGGCGTTTTTGCCGGATCAGA
GGAGTAGACGCCATTTGGTGCTGCCTACAAGAGTGGATGTGGATTTCCGG
GCGGCGTGCTTTTGTCATCGGAGGGTTGTGGACGTGGGGTTTGTGTGTTC
GATTTGTTTGAGTATCTTCTGTGAGCCGTTGGGGGATGGGGTGTGTTTGA
CTTGTGGGAGTCGGTTGGATGTTAGTGATTATGGGGCTAAGCCGGCGGTG
GTGGCTAGAAAGAAGAAGAAGAAGAAGGTTAAGGGGAATGGGATGTCTGC
GGCGGGGACGCCTACGCCTACACCGACGCCGGGGCCGTGAATGAATACCA
TCGACGCAACAGAACACTACGAAACCAGCGCCCACGACCGGCCCCCCTCC
CTCCTAACCATCATCCTCGACACCAACCCACACGCCTGGGCACTCCTCAA
CCCCTCCCTTCCCCTCTCCACCGCCATCGCCAACATCCTCGTCTTCATCA
ACGCCCACCTAGCATGCAACTACGCGAACGAAGTAGCCGTGGTATCCTCA
CACACCTCTCAAGCAACATGGCTCTACCCCGTCGAAAAAGCCACCACCAC
CACCACCGCCAATAACCTAGACTCCGACGGCGACATCTCCATGCGCTCCC
AACAACCACCACCACCCACTCACACCAACATAAACAAATACCGCCCCTTC
CGCATCGTCGAAGAACAAGTCTCCACGCACCTCCACAACCTAATGTCCCA
AACCACCCCAGAAACCCTCCAATCCACCACCTCAACTATGATGGCCGGCG
CGCTTACCCTAGCACTAAGCCACATCAACCGCCGCACGTTAGCATGGAAT
GAAGCGCACGGGGGAGATATCGACACGACAAACCCCAATGACCCATCTTC
CACATCCTCCTCATCACATAATACAAAGGGTACTGCGGAATCAACCCTCC
AATCACGCATCCTCATTCTCTCTGTGTCAAGCTCCACCGGTTCAGCGCAT
CAATATATCCCCATCATGAATGCTATATTCGCTTGCCAGAGGCTGCATAT
TCCGATTGATGTATGTAAGGTGTCTGGCGATGCGGTATTCTTGCAGCAGG
CGTCGGATGCGACCAAGGGAGTGTATATGGCGTTGGATGAGCCGAAGGGA
CTATTGCAGTACTTAATGATGGCGTTTTTGCCGGATCAGAGGAGTAGACG
CCATTTGGTGCTGCCTACAAGAGTGGATGTGGATTTCCGGGCGGCGTGCT
TTTGTCATCGGAGGGTTGTGGACGTGGGGTTTGTGTGTTCGATTTGTTTG
AGTATCTTCTGTGAGCCGTTGGGGGATGGGGTGTGTTTGACTTGTGGGAG
TCGGTTGGATGTTAGTGATTATGGGGCTAAGCCGGCGGTGGTGGCTAGAA
AGAAGAAGAAGAAGAAGGTTAAGGGGAATGGGATGTCTGCGGCGGGGACG
CCTACGCCTACACCGACGCCGGGGCCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000439transcription factor TFIIH core complex
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006289nucleotide-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_010398KYF_010398Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010398-T1.exon1KYF_010398-T1.exon1Aspergillus niger KYF3exon
KYF_010398-T1.exon2KYF_010398-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010398-T1.cdsKYF_010398-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_010398-T1KYF_010398-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926369X
DBxrefInterPro:IPR036465
DBxrefInterPro:IPR004600
DBxrefPFAM:PF03850
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1138480..1139708 +
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