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KYF_010451-T1, KYF_010451-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_010451-T1
Unique NameKYF_010451-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1296674..1297799-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_010451-T1 ID=KYF_010451-T1|Name=KYF_010451-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1126bp|location=Sequence derived from alignment at ch8:1296674..1297799- (Aspergillus niger KYF3)
ATGTCCGCCATCGAGCCAGTCGTGCGTACCGCCCCATCCCGAAACTATCA
TCCACATACAATCTCCTTGAAATTGAATACACATGTGTCAAATGAGGGCG
TCACGGTCCTGGAGTCGGAAATTCATATACCAAAGTACATTTGTCGCTGA
CTTGAATTGTTGGGTTTTCGCAGGTCGTCATTGACGGCAAGGGACACCTC
TTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAA
GATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCC
GTGCGAAGCGTATGTTCTATCCGACCCGGTTTCTTTCGATTTCATTTTGC
AATATGGATTTTCTTTGGGATGAATGGGAGTGCGACGGTTTTCGACATAT
GGAGGAGGACATCGGCAATTGATTGGAATATTTATGGAGGAACAAGCAAC
ACATGTGTGCTGGTGGACAACGGGCTGACCTGGATTTCGCGATATAGTCA
AGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGA
GGTGAGACTACCCGATGACTTTCCCCCTTCGATGGGGAAAGACGACACTT
ATCTCTTTTGCGGGACTCCGTGCTGAATCGCTACAGGTCCCTTCCACTTC
CGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCA
CAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGG
GTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCT
CTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCG
TCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGGTACG
TTTATGCTGAAGTGGAGAGGATAAAATGGGAGATGTTGGAATATTGGGTG
CAGAAGGCTAACGGATTCGTTTTTTCTACTCGTACAGACTTGAGGAGCGC
AGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCG
CCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGA
GCCAGCTCGCTCAGTACGGATACTAG
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Coding sequence (CDS) from alignment at ch8:1296674..1297799-

>KYF_010451-T1 ID=KYF_010451-T1|Name=KYF_010451-T1|organism=Aspergillus niger KYF3|type=CDS|length=3045bp|location=Sequence derived from alignment at ch8:1296674..1297799- (Aspergillus niger KYF3)
ACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGA
AGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAAC
GAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGGTCCCTTCCAC
TTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCC
CCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCG
AGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAG
GCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGG
TCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGTC
AAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGG
AGGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACT
GTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGA
AGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATC
GAGCCAGTCACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACG
AGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCG
GGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGGT
CCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGG
CATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGA
AGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTC
GTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTG
CACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTG
TTGCCAGTCAAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCC
CACCCGCGGAGGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTG
GCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGT
GAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCATG
TCCGCCATCGAGCCAGTCACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTG
CATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCCAG
AAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTACGG
ATACTAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGC
TGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGG
AGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAG
CGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCG
CAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACC
AGGACGTTGTTGCCAGTCAAGTACCACGCCTACCTTCGCAAGATGACTCG
TTTCAACCCCACCCGCGGAGGTCGTCATTGACGGCAAGGGACACCTCTTG
GGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGAT
CGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTG
CGAAGCATGTCCGCCATCGAGCCAGTCACTTGAGGAGCGCAGAAAGGTTA
AGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTC
CACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGC
TCAGTACGGATACTAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTT
CTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCG
CCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGAC
AAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCG
CCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCT
GGAAGTACCAGGACGTTGTTGCCAGTCAAGTACCACGCCTACCTTCGCAA
GATGACTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGACGGCAAGGGA
CACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGG
TCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGT
TCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAGTCACTTGAGGAGCGCA
GAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGC
CAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAG
CCAGCTCGCTCAGTACGGATACTAGGTCCCTTCCACTTCCGTGCCCCCTC
CCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCC
GTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCC
CCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCT
CCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACG
AGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGTCAAGTACCACGCCTA
CCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGAC
GGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCT
GCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCT
CCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP46KYF_010451Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_010451-T1KYF_010451-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010451-T1.cdsKYF_010451-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_010451-T1.exon5KYF_010451-T1.exon5Aspergillus niger KYF3exon
KYF_010451-T1.exon4KYF_010451-T1.exon4Aspergillus niger KYF3exon
KYF_010451-T1.exon3KYF_010451-T1.exon3Aspergillus niger KYF3exon
KYF_010451-T1.exon2KYF_010451-T1.exon2Aspergillus niger KYF3exon
KYF_010451-T1.exon1KYF_010451-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR023563
DBxrefInterPro:IPR005755
DBxrefInterPro:IPR036899
DBxrefInterPro:IPR005822
DBxrefPFAM:PF00572
Product60S ribosomal protein L16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1296674..1297799 -
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