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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2746008..2747369+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_010928-T1 ID=KYF_010928-T1|Name=KYF_010928-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1362bp|location=Sequence derived from alignment at ch8:2746008..2747369+ (Aspergillus niger KYF3)
ATGGACGTCGTTCCCTCTACCACACCCGACGAGGCAGTGCGCCTCTCCGC
CAAGCGGACGGCCGAGCTCTTCGGTTCTGACTACCTAATGGTCACCCCGT
CCGTCGCCAATGGCTCCATCGCCACGTCCTACCGGCGCAAAACAGAATAC
GAAGATGTGAAGGAACTCCCCCCAGCGCTCGCCGAAAAGCAAGCCAAAGC
CGTGGCCGCTGGACGCGCCAAACGCCCCAAGATCCAACCACAGGCCCAAG
CCGCCGTGGACGGCAGCGGCGCGTCCATGGCACTCGTCAAGAAGGCCCCC
GGCCCAGCAGCCGGCGGCGTCGGCGGTGAAAACGCTCCCAAGAGTCTCAT
CCAACGTCCCTCGGCGACGAAACAGCAACGACCCGACTGGCACCCGCCAT
GGAAGCTCATGCGGGTCATCTCCGGCCACTTGGGTTGGGTGCGCAGTTTG
GCCGTCGAGCCCAACAACGAGTGGTTTGCTAGTGGTGCAGGCGATCGGAC
CATCAAGATCTGGAATCTGGCTACAGGTGCCCTCCGTCTCACTCTCACGG
GTCACATTTCCACTGTCCGCGGCTTGGCCGTGTCCCCCCGACATCCGTAC
CTCTTCTCCTGCGGTGAAGACAAAATGGTCAAGTGTTGGGATCTCGAAAC
CAACAAAGTCATCCGTCACTACCACGGCCACCTCAGCGGCGTCTACACCC
TCGACCTGCACCCCCGTCTCGACCTCCTCGTCACAGGTGGTCGTGACGGC
GTAGCCCGCGTCTGGGACATGCGCACTCGCGCCAACGTCCACGTCCTCGC
CGGCCACAAGGGCACCGTCGCCGATGTCAAATGCCAGGAAGCCGACCCGC
AGATCATCTCCGGCTCCCTGGACGCCACCGTCCGCCTCTGGGATCTCGCA
GCCGGTAAATCCATGGGCGTGCTCACGCACCACAAGAAGGGTGTGCGCGC
TCTCGCCACTCACCCCCGCGAATTCACCTTCGCCTCCGCCAGCACCGGCT
CCATTAAGCAATGGAAGTGCCCCGAGGGCGACTTCATGCAGAACTTCGAT
GGTCAAAACGCTATTATCAACACCCTCTCCGTCAACGAAGACAACGTCAT
GTTCTCCGGCGGTGATAACGGCTCCATGTGCTTCTGGGATTGGAAGACCG
GGTACCAGTTCCAGAGCATCGACGCTGTCGCTCAGCCGGGTTCTCTGGAA
GCCGAGGCGGGTATTATGGCTTCGACGTTTGATCGTACTGGCTTGCGTCT
TATTACTGGTGAGGCTGACAAGACTATTAAGATTTGGAAGCCGGATGATG
AGGCCACCGAAGAATCGCACCCTGTTACCTGGGCCCCCACCTTGGGGAGA
CAGAGGTATTAG back to topCoding sequence (CDS) from alignment at ch8:2746008..2747369+ >KYF_010928-T1 ID=KYF_010928-T1|Name=KYF_010928-T1|organism=Aspergillus niger KYF3|type=CDS|length=1362bp|location=Sequence derived from alignment at ch8:2746008..2747369+ (Aspergillus niger KYF3)
ATGGACGTCGTTCCCTCTACCACACCCGACGAGGCAGTGCGCCTCTCCGC
CAAGCGGACGGCCGAGCTCTTCGGTTCTGACTACCTAATGGTCACCCCGT
CCGTCGCCAATGGCTCCATCGCCACGTCCTACCGGCGCAAAACAGAATAC
GAAGATGTGAAGGAACTCCCCCCAGCGCTCGCCGAAAAGCAAGCCAAAGC
CGTGGCCGCTGGACGCGCCAAACGCCCCAAGATCCAACCACAGGCCCAAG
CCGCCGTGGACGGCAGCGGCGCGTCCATGGCACTCGTCAAGAAGGCCCCC
GGCCCAGCAGCCGGCGGCGTCGGCGGTGAAAACGCTCCCAAGAGTCTCAT
CCAACGTCCCTCGGCGACGAAACAGCAACGACCCGACTGGCACCCGCCAT
GGAAGCTCATGCGGGTCATCTCCGGCCACTTGGGTTGGGTGCGCAGTTTG
GCCGTCGAGCCCAACAACGAGTGGTTTGCTAGTGGTGCAGGCGATCGGAC
CATCAAGATCTGGAATCTGGCTACAGGTGCCCTCCGTCTCACTCTCACGG
GTCACATTTCCACTGTCCGCGGCTTGGCCGTGTCCCCCCGACATCCGTAC
CTCTTCTCCTGCGGTGAAGACAAAATGGTCAAGTGTTGGGATCTCGAAAC
CAACAAAGTCATCCGTCACTACCACGGCCACCTCAGCGGCGTCTACACCC
TCGACCTGCACCCCCGTCTCGACCTCCTCGTCACAGGTGGTCGTGACGGC
GTAGCCCGCGTCTGGGACATGCGCACTCGCGCCAACGTCCACGTCCTCGC
CGGCCACAAGGGCACCGTCGCCGATGTCAAATGCCAGGAAGCCGACCCGC
AGATCATCTCCGGCTCCCTGGACGCCACCGTCCGCCTCTGGGATCTCGCA
GCCGGTAAATCCATGGGCGTGCTCACGCACCACAAGAAGGGTGTGCGCGC
TCTCGCCACTCACCCCCGCGAATTCACCTTCGCCTCCGCCAGCACCGGCT
CCATTAAGCAATGGAAGTGCCCCGAGGGCGACTTCATGCAGAACTTCGAT
GGTCAAAACGCTATTATCAACACCCTCTCCGTCAACGAAGACAACGTCAT
GTTCTCCGGCGGTGATAACGGCTCCATGTGCTTCTGGGATTGGAAGACCG
GGTACCAGTTCCAGAGCATCGACGCTGTCGCTCAGCCGGGTTCTCTGGAA
GCCGAGGCGGGTATTATGGCTTCGACGTTTGATCGTACTGGCTTGCGTCT
TATTACTGGTGAGGCTGACAAGACTATTAAGATTTGGAAGCCGGATGATG
AGGCCACCGAAGAATCGCACCCTGTTACCTGGGCCCCCACCTTGGGGAGA
CAGAGGTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262KUJ |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | pre-mRNA-splicing factor prp46 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2746008..2747369 + |
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