|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2987540..2988790+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_011008-T1 ID=KYF_011008-T1|Name=KYF_011008-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1251bp|location=Sequence derived from alignment at ch8:2987540..2988790+ (Aspergillus niger KYF3)
ATGCAACAGACCGCTGCACTTCCTAAGCGGTTATCCTGCGATCGCTGCTA
CGCGCAGAAACTGCGGTGTCCGCGGCCGAGTACGAATGACGATGCAAGTT
GCATCCGATGTTTAAGGCAGAAGGTGCAATGCGTCTATAGCACTGCTTTG
CCTAAGGGTCGGCCCCGCGCTGCGGTCCGTGCTTGTGCTGCTGGAGCGGG
AGCTACGGCTGGAGCTCCCCCTATAACTACGACGACGACTACTGCTGCCC
CGTCTAGCTCAGACACTGCCCCTCCCATTTTCTCCACCGAAGATCTGGCC
TCGTTGACCGGTCTATCCACTTCAGGATGGCTTCCAGACCCGACTTGGGA
GGATAGTTTTTGTTTCCTATCATCCCAAGTTGTGCCGCAGCCGCCACCTC
TTGATACCACTCCTCCGCCTCGTTCACTCTCCGCATCAGGTTTAGACAAC
CCTGAAAATTGCGTTGGGCGGCTTTCGGACTTAGCAACGCGTCTTCACGC
CGTCTATCAAACCACACGAGCGCTGTCTGATCATCCCCTCATCACCAATG
CCGCGTTTGAAGCTGTTACCACACTTTTCAATGCCCCCTTGTCACCTCCC
AGCGCTGCTACCACCGCCGCCACTACCAACCTCCGCGAAACATTCACATC
CTCCCGTCATCTCCTAGAAACCATCTCTCATCTTCTCTGGGCCACACCTA
ACAACAATCCATCAACTGCACCCGCAGCTGCGGCAGACGAAACAGTGATA
TACCATTTCACCATAGCCTGCTACAGTCTTCTCCTCCTCATATATGCTAC
CCTCCTTACCGCCCTTCACCGCGATGCCCTAACTCACACCCAACCGTCAT
TGTCGACAACCACCACCACTACCGGCCCCGACAACAACACCAGCACATGG
TGCTCAGCCCCCTCCCTCGTCGAACTTCGCCTCGTCCTCCTCTTCCACAT
GATCACCTATTTTCTGGATCGTCTCCAGCAAATGATCAGGATGTATACCG
CCGAGTTTGAAAAGCAGGCTTCCAACAGCACCACCGGAAGACGACCACCC
ACAAGCGGGAGATGGAGCGAGGAAGTAGAGGAGATGATGGTGGTCGAAGA
GCCTTGGGAGCGGGAGCAGCATATACCGCCCCCGCCTCCTCCCACCTCCT
CTCTGGGCTCGATCTCTGAGTTGGAGACCCAAGCTCGAGCGGCACTGATG
CAGCTGCGAATGTCGTTGGTGGCTACAAGGGGTGGTTTGGTCGATAACTA
G back to topCoding sequence (CDS) from alignment at ch8:2987540..2988790+ >KYF_011008-T1 ID=KYF_011008-T1|Name=KYF_011008-T1|organism=Aspergillus niger KYF3|type=CDS|length=1251bp|location=Sequence derived from alignment at ch8:2987540..2988790+ (Aspergillus niger KYF3)
ATGCAACAGACCGCTGCACTTCCTAAGCGGTTATCCTGCGATCGCTGCTA
CGCGCAGAAACTGCGGTGTCCGCGGCCGAGTACGAATGACGATGCAAGTT
GCATCCGATGTTTAAGGCAGAAGGTGCAATGCGTCTATAGCACTGCTTTG
CCTAAGGGTCGGCCCCGCGCTGCGGTCCGTGCTTGTGCTGCTGGAGCGGG
AGCTACGGCTGGAGCTCCCCCTATAACTACGACGACGACTACTGCTGCCC
CGTCTAGCTCAGACACTGCCCCTCCCATTTTCTCCACCGAAGATCTGGCC
TCGTTGACCGGTCTATCCACTTCAGGATGGCTTCCAGACCCGACTTGGGA
GGATAGTTTTTGTTTCCTATCATCCCAAGTTGTGCCGCAGCCGCCACCTC
TTGATACCACTCCTCCGCCTCGTTCACTCTCCGCATCAGGTTTAGACAAC
CCTGAAAATTGCGTTGGGCGGCTTTCGGACTTAGCAACGCGTCTTCACGC
CGTCTATCAAACCACACGAGCGCTGTCTGATCATCCCCTCATCACCAATG
CCGCGTTTGAAGCTGTTACCACACTTTTCAATGCCCCCTTGTCACCTCCC
AGCGCTGCTACCACCGCCGCCACTACCAACCTCCGCGAAACATTCACATC
CTCCCGTCATCTCCTAGAAACCATCTCTCATCTTCTCTGGGCCACACCTA
ACAACAATCCATCAACTGCACCCGCAGCTGCGGCAGACGAAACAGTGATA
TACCATTTCACCATAGCCTGCTACAGTCTTCTCCTCCTCATATATGCTAC
CCTCCTTACCGCCCTTCACCGCGATGCCCTAACTCACACCCAACCGTCAT
TGTCGACAACCACCACCACTACCGGCCCCGACAACAACACCAGCACATGG
TGCTCAGCCCCCTCCCTCGTCGAACTTCGCCTCGTCCTCCTCTTCCACAT
GATCACCTATTTTCTGGATCGTCTCCAGCAAATGATCAGGATGTATACCG
CCGAGTTTGAAAAGCAGGCTTCCAACAGCACCACCGGAAGACGACCACCC
ACAAGCGGGAGATGGAGCGAGGAAGTAGAGGAGATGATGGTGGTCGAAGA
GCCTTGGGAGCGGGAGCAGCATATACCGCCCCCGCCTCCTCCCACCTCCT
CTCTGGGCTCGATCTCTGAGTTGGAGACCCAAGCTCGAGCGGCACTGATG
CAGCTGCGAATGTCGTTGGTGGCTACAAGGGGTGGTTTGGTCGATAACTA
G back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.5 |
| Note | antiSMASH:Cluster_8.4 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2987540..2988790 + |
|
