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KYF_011024-T1, KYF_011024-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011024-T1
Unique NameKYF_011024-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3035090..3035472+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011024-T1 ID=KYF_011024-T1|Name=KYF_011024-T1|organism=Aspergillus niger KYF3|type=mRNA|length=383bp|location=Sequence derived from alignment at ch8:3035090..3035472+ (Aspergillus niger KYF3)
ATGTCGCTTCACTCTTATATTAACAGTAAGTTTGGTCTCAAGAGATCCAT
TTCATGTCTGGGATTTAGTCTCATGGTCAGTGCTAACGTATGTGGTTTTA
CCCCGATATAGAGAAAGTATGCATCCTGACGGTTGACGGACGGACACTCC
TGGGGACATTACTCTCGACCGACCAGCTCACGAACCTGGTTCTCCTGGAC
ACGATCGAGCGAATCATCCGGACCCCCGACGACCCGGAACCCAGTTCCCA
GATTGAACATGGGCTGTATCTGATCCGAGGCGACAACGTTGTATTATGCG
GAGAGGTGGACGAAGCCATTGACAACGACATCGACTGGACGAAGGTCAGG
GGAGAAGTGGTCAAAGGTACCAAGAACGCATGA
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Coding sequence (CDS) from alignment at ch8:3035090..3035472+

>KYF_011024-T1 ID=KYF_011024-T1|Name=KYF_011024-T1|organism=Aspergillus niger KYF3|type=CDS|length=594bp|location=Sequence derived from alignment at ch8:3035090..3035472+ (Aspergillus niger KYF3)
ATGTCGCTTCACTCTTATATTAACAAGAAAGTATGCATCCTGACGGTTGA
CGGACGGACACTCCTGGGGACATTACTCTCGACCGACCAGCTCACGAACC
TGGTTCTCCTGGACACGATCGAGCGAATCATCCGGACCCCCGACGACCCG
GAACCCAGTTCCCAGATTGAACATGGGCTGTATCTGATCCGAGGCGACAA
CGTTGTATTATGCGGAGAGGTGGACGAAGCCATTGACAACGACATCGACT
GGACGAAGGTCAGGGGAGAAGTGGTCAAAGGTACCAAGAACGCATGAATG
TCGCTTCACTCTTATATTAACAAGAAAGTATGCATCCTGACGGTTGACGG
ACGGACACTCCTGGGGACATTACTCTCGACCGACCAGCTCACGAACCTGG
TTCTCCTGGACACGATCGAGCGAATCATCCGGACCCCCGACGACCCGGAA
CCCAGTTCCCAGATTGAACATGGGCTGTATCTGATCCGAGGCGACAACGT
TGTATTATGCGGAGAGGTGGACGAAGCCATTGACAACGACATCGACTGGA
CGAAGGTCAGGGGAGAAGTGGTCAAAGGTACCAAGAACGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005688U6 snRNP
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_011024KYF_011024Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011024-T1.exon1KYF_011024-T1.exon1Aspergillus niger KYF3exon
KYF_011024-T1.exon2KYF_011024-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011024-T1.cdsKYF_011024-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011024-T1KYF_011024-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034103
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3035090..3035472 +
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