|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3736293..3738464+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_011247-T1 ID=KYF_011247-T1|Name=KYF_011247-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2172bp|location=Sequence derived from alignment at ch8:3736293..3738464+ (Aspergillus niger KYF3)
ATGTTCATGCACCCTGCTGCACGTAAGGGTTTGATCACTGAACCAACTTC
CATCCCGTATCTCAACTACCAAGATCCCGTTTGCATACAAGACGACCAGA
TCCTCGACTACTCTCAAGAGACCGCTCTCCACTTTCTCGGCCAACAACAA
CCTCGACTGCAGACTCCTTTCCAGTACCAGCCGGATTTGCAGTTCGTCTC
CCCGCCGTCTTCCGCTCCCTCCTCCCCTACTTCCTCACCCGCCTCCACCA
TTTCCCACTATCCTGCGACAACAGCGGTTGCCGCAGATTACTCTTCTGCC
GTCTTTGACGGCAATTCCTTCGAGGCCCCTTCGATGACACCTTCTTCCTC
CTACAACCCTTCCATCAACATCCATCACTCGGCATCACCACCTTCACAAG
CCTACCTTCCCCAATATACTCAGCCCTACTACTTCAACGGTAACCCGATG
TTGGCACAACAATCTGTCGCGAACAACCACGGTTGGGAAGGCAACTTGCA
GCTGTTGGGCCCAGCTCGCCTCCAGAACAATCTACTGAAAGCCTCTGCTA
GTCCATCATCGAGCCGATCTGCACCTGCTGGCAGTTCTTACTCGAGGACA
AACGGTGTGGCCAAGCCTCTGCCTACTCCCGTCCAGACCCCCGTCCAGAC
CTTCCAAGATGGTAGCCAGACCGACGCCGATCTTGCTATGAGACGGGCCT
TTCTAGAGCAGCAGCAGCAACAGCAACAGCAACAGCAAAAGCAATCTCGT
CACCAGCATCAGTCTAGCGACTACTCACTAGCGCCTTCTGTATCGAGCGT
GAGTCACAACTCGCCAGTGACTCCTCACACGGGCTTCGAAGACCTCGATG
ACGCATCGAAGGCGATTGTAAATGGTGAGAACCGGTTTCCCGACGTAGAC
AAGTGGATGGATGATTACTTACGCCTCGATGCGCTTTCAGACTACACCAA
CCACAACGCGAACAACAACATGACCATTGGCATTCCCAAGCTCAACCGCA
CGATTTCCGACATTTACCAGGACGAGCTTTACAACCCCGCCATGATGTCT
ACTCCGCAGATGGCTAAGCCCGCGACGAACCAGCAAAATCTCCTGACACC
GTCGTTCCGGAATGTGATTGCCGATCGCCTTCAGGCTGCCAACCAGGGCC
ACTTGACCGCACGGTCCCAGTCTCCCATGGTGAGCATGCCGCGCGATCGC
TCGCCCTTCCGTCAGAACTCTCCCCTGGCCGCTGAGTACAACCATGCGGC
CTTGCAACAGCCTCAGATGGCCACTAGCGCCCCTACATCCCAAAATGGGG
TGAACATGGGCCAGGCGGCTCAGGGAGAGCCCAAGACGATGTCTCCCAAG
GATGCACTGTTGGACTTCAACGAGGGCGACGATACTGGATTGCCTCTGTT
CCCCCCTTCGTCACAGCCCGACTTCAATCTGGGCGATGCGCTGGGCGGAC
TCCGTCGGGAAAGTTCCGGCTCATTCCAGCCGACTCAAAACTTCACATCG
ATGGAGTCGTTCCCCAGCCAGTACGCTACGCAGGGTACATCCCAGCAGTT
CCCCTTTGGTCAACAGCAGCAGAATCACCGCCAGCCACAGCAACATAACA
CCAATCTGCTGCACCAGACTCCCGAGTTCCCCGCATCTCTTCCTCGGTTC
GACTCTACGGGTAGTGATGTGCTGCCCTCGACTGAGATGACCTCCCCACA
GGCATCGGCGAAGATGCCGATGCAGGCACCGCCGGTCAAGGAAGAGATCA
GTCGACCGGAAAATACCTCGGCCGACGGAGGTACCTACACCTGCACATAC
CACGGCTGCACCCTACGCTTTGAGACTCCGGCCAAGCTACAAAAGCACAA
GCGTGAGGCGCACCGTCAGACCACCCCTGGCGGTCATCTGGTCACTCGCG
ATACGTCGGCCCGCAATTCGCAGGCCGGACCACACAAGTGTGAGCGCATC
AATCCGTCTACGGGCAAGCCGTGCAACTCTGTGTTCTCACGGCCCTACGA
TCTTACACGGCACGAGGACACGATCCACAATGCTCGCAAGCAAAAGGTGC
GGTGTCATCTGTGCACGGAGGAGAAGACCTTCTCGCGCAATGATGCGCTC
ACCCGGCACATGCGCGTGGTGCATCCGGAGGTTGACTGGCCCGGCAAGCA
ACGGCGCAGAGGGCGGGAGTGA back to topCoding sequence (CDS) from alignment at ch8:3736293..3738464+ >KYF_011247-T1 ID=KYF_011247-T1|Name=KYF_011247-T1|organism=Aspergillus niger KYF3|type=CDS|length=2172bp|location=Sequence derived from alignment at ch8:3736293..3738464+ (Aspergillus niger KYF3)
ATGTTCATGCACCCTGCTGCACGTAAGGGTTTGATCACTGAACCAACTTC
CATCCCGTATCTCAACTACCAAGATCCCGTTTGCATACAAGACGACCAGA
TCCTCGACTACTCTCAAGAGACCGCTCTCCACTTTCTCGGCCAACAACAA
CCTCGACTGCAGACTCCTTTCCAGTACCAGCCGGATTTGCAGTTCGTCTC
CCCGCCGTCTTCCGCTCCCTCCTCCCCTACTTCCTCACCCGCCTCCACCA
TTTCCCACTATCCTGCGACAACAGCGGTTGCCGCAGATTACTCTTCTGCC
GTCTTTGACGGCAATTCCTTCGAGGCCCCTTCGATGACACCTTCTTCCTC
CTACAACCCTTCCATCAACATCCATCACTCGGCATCACCACCTTCACAAG
CCTACCTTCCCCAATATACTCAGCCCTACTACTTCAACGGTAACCCGATG
TTGGCACAACAATCTGTCGCGAACAACCACGGTTGGGAAGGCAACTTGCA
GCTGTTGGGCCCAGCTCGCCTCCAGAACAATCTACTGAAAGCCTCTGCTA
GTCCATCATCGAGCCGATCTGCACCTGCTGGCAGTTCTTACTCGAGGACA
AACGGTGTGGCCAAGCCTCTGCCTACTCCCGTCCAGACCCCCGTCCAGAC
CTTCCAAGATGGTAGCCAGACCGACGCCGATCTTGCTATGAGACGGGCCT
TTCTAGAGCAGCAGCAGCAACAGCAACAGCAACAGCAAAAGCAATCTCGT
CACCAGCATCAGTCTAGCGACTACTCACTAGCGCCTTCTGTATCGAGCGT
GAGTCACAACTCGCCAGTGACTCCTCACACGGGCTTCGAAGACCTCGATG
ACGCATCGAAGGCGATTGTAAATGGTGAGAACCGGTTTCCCGACGTAGAC
AAGTGGATGGATGATTACTTACGCCTCGATGCGCTTTCAGACTACACCAA
CCACAACGCGAACAACAACATGACCATTGGCATTCCCAAGCTCAACCGCA
CGATTTCCGACATTTACCAGGACGAGCTTTACAACCCCGCCATGATGTCT
ACTCCGCAGATGGCTAAGCCCGCGACGAACCAGCAAAATCTCCTGACACC
GTCGTTCCGGAATGTGATTGCCGATCGCCTTCAGGCTGCCAACCAGGGCC
ACTTGACCGCACGGTCCCAGTCTCCCATGGTGAGCATGCCGCGCGATCGC
TCGCCCTTCCGTCAGAACTCTCCCCTGGCCGCTGAGTACAACCATGCGGC
CTTGCAACAGCCTCAGATGGCCACTAGCGCCCCTACATCCCAAAATGGGG
TGAACATGGGCCAGGCGGCTCAGGGAGAGCCCAAGACGATGTCTCCCAAG
GATGCACTGTTGGACTTCAACGAGGGCGACGATACTGGATTGCCTCTGTT
CCCCCCTTCGTCACAGCCCGACTTCAATCTGGGCGATGCGCTGGGCGGAC
TCCGTCGGGAAAGTTCCGGCTCATTCCAGCCGACTCAAAACTTCACATCG
ATGGAGTCGTTCCCCAGCCAGTACGCTACGCAGGGTACATCCCAGCAGTT
CCCCTTTGGTCAACAGCAGCAGAATCACCGCCAGCCACAGCAACATAACA
CCAATCTGCTGCACCAGACTCCCGAGTTCCCCGCATCTCTTCCTCGGTTC
GACTCTACGGGTAGTGATGTGCTGCCCTCGACTGAGATGACCTCCCCACA
GGCATCGGCGAAGATGCCGATGCAGGCACCGCCGGTCAAGGAAGAGATCA
GTCGACCGGAAAATACCTCGGCCGACGGAGGTACCTACACCTGCACATAC
CACGGCTGCACCCTACGCTTTGAGACTCCGGCCAAGCTACAAAAGCACAA
GCGTGAGGCGCACCGTCAGACCACCCCTGGCGGTCATCTGGTCACTCGCG
ATACGTCGGCCCGCAATTCGCAGGCCGGACCACACAAGTGTGAGCGCATC
AATCCGTCTACGGGCAAGCCGTGCAACTCTGTGTTCTCACGGCCCTACGA
TCTTACACGGCACGAGGACACGATCCACAATGCTCGCAAGCAAAAGGTGC
GGTGTCATCTGTGCACGGAGGAGAAGACCTTCTCGCGCAATGATGCGCTC
ACCCGGCACATGCGCGTGGTGCATCCGGAGGTTGACTGGCCCGGCAAGCA
ACGGCGCAGAGGGCGGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3736293..3738464 + |
|
