You are here

Home

KYF_011302-T1, KYF_011302-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011302-T1
Unique NameKYF_011302-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3920744..3921675+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011302-T1 ID=KYF_011302-T1|Name=KYF_011302-T1|organism=Aspergillus niger KYF3|type=mRNA|length=932bp|location=Sequence derived from alignment at ch8:3920744..3921675+ (Aspergillus niger KYF3)
ATGAGTGCCACCACTACCGTCACCGAGCCGCCGAGAATCACGGCTGAGAA
CGTCGCGACTCTCTTCCCCGAGGTTGACACTTCTCTGGCGCGGGAGGTGC
TCCCCACTGCGACAAGCAATGCCTCCGCCCCCGGCGACGAGCTTGCCGGT
TATGATGAGGAACAGGTCCGCCTGATGGAAGAGGTGTGTATTGTGCTGGA
TGAAGATGACAAGCCCATTGGCAGTGCCAGCAAGAAGGCCTGTAAGTTTA
TCGATCGTCACCAAGCATTAAGAACCTAATCAATGCTGATGGCGCGACTC
CACAGGCCACTTGATGACCAACATTGATCGCGGCCTCCTCCACCGTGCTT
TCTCCGTATTCCTTTTCGACTCGAACAAGCGTCTGCTGCTTCAACAACGT
GCGACCGAGAAGATCACCTTCCCCGACATGTGGACGAACACCTGCTGCTC
CCATCCCCTGGGCATCCCTGGAGAGACGGGCTCGCAGCTCGATGCGGCCG
TGCTGGGCGTGAAGCGCGCGGCGCAGCGCAAGCTGGAACACGAGCTTGGT
ATCAAACCGGAGCAGGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGCAT
CCACTACAAGGCGCCCAGTGATGGCAAATGGGGAGAGCACGAGAGTATGT
CTATACCAGTGGATGAGCTGTTGGATAGGTGACTGACCGTATCTAGTTGA
CTACATTCTGTTCATCCAGGCGGACGTCGATTTGAATGTCAACCCCAACG
AAGTGCGCGACACGCGGTACGTGTCGGCGGACGAGCTGAAGCAGATGTTC
GAGCAACCGGGACTGAAGTTCACGCCGTGGTTCAAGCTGATCTGCAATTC
GATGCTTTTCGAGTGGTGGAGCCATCTGGGCTCGGCGTCGCTTGAAGGAT
ACAAGAACGAGCAGCAGATCCGGAGGATGTAA
back to top

Coding sequence (CDS) from alignment at ch8:3920744..3921675+

>KYF_011302-T1 ID=KYF_011302-T1|Name=KYF_011302-T1|organism=Aspergillus niger KYF3|type=CDS|length=2448bp|location=Sequence derived from alignment at ch8:3920744..3921675+ (Aspergillus niger KYF3)
ATGAGTGCCACCACTACCGTCACCGAGCCGCCGAGAATCACGGCTGAGAA
CGTCGCGACTCTCTTCCCCGAGGTTGACACTTCTCTGGCGCGGGAGGTGC
TCCCCACTGCGACAAGCAATGCCTCCGCCCCCGGCGACGAGCTTGCCGGT
TATGATGAGGAACAGGTCCGCCTGATGGAAGAGGTGTGTATTGTGCTGGA
TGAAGATGACAAGCCCATTGGCAGTGCCAGCAAGAAGGCCTGCCACTTGA
TGACCAACATTGATCGCGGCCTCCTCCACCGTGCTTTCTCCGTATTCCTT
TTCGACTCGAACAAGCGTCTGCTGCTTCAACAACGTGCGACCGAGAAGAT
CACCTTCCCCGACATGTGGACGAACACCTGCTGCTCCCATCCCCTGGGCA
TCCCTGGAGAGACGGGCTCGCAGCTCGATGCGGCCGTGCTGGGCGTGAAG
CGCGCGGCGCAGCGCAAGCTGGAACACGAGCTTGGTATCAAACCGGAGCA
GGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGCATCCACTACAAGGCGC
CCAGTGATGGCAAATGGGGAGAGCACGAGATTGACTACATTCTGTTCATC
CAGGCGGACGTCGATTTGAATGTCAACCCCAACGAAGTGCGCGACACGCG
GTACGTGTCGGCGGACGAGCTGAAGCAGATGTTCGAGCAACCGGGACTGA
AGTTCACGCCGTGGTTCAAGCTGATCTGCAATTCGATGCTTTTCGAGTGG
TGGAGCCATCTGGGCTCGGCGTCGCTTGAAGGATACAAGAACGAGCAGCA
GATCCGGAGGATGTAAATGAGTGCCACCACTACCGTCACCGAGCCGCCGA
GAATCACGGCTGAGAACGTCGCGACTCTCTTCCCCGAGGTTGACACTTCT
CTGGCGCGGGAGGTGCTCCCCACTGCGACAAGCAATGCCTCCGCCCCCGG
CGACGAGCTTGCCGGTTATGATGAGGAACAGGTCCGCCTGATGGAAGAGG
TGTGTATTGTGCTGGATGAAGATGACAAGCCCATTGGCAGTGCCAGCAAG
AAGGCCTGCCACTTGATGACCAACATTGATCGCGGCCTCCTCCACCGTGC
TTTCTCCGTATTCCTTTTCGACTCGAACAAGCGTCTGCTGCTTCAACAAC
GTGCGACCGAGAAGATCACCTTCCCCGACATGTGGACGAACACCTGCTGC
TCCCATCCCCTGGGCATCCCTGGAGAGACGGGCTCGCAGCTCGATGCGGC
CGTGCTGGGCGTGAAGCGCGCGGCGCAGCGCAAGCTGGAACACGAGCTTG
GTATCAAACCGGAGCAGGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGC
ATCCACTACAAGGCGCCCAGTGATGGCAAATGGGGAGAGCACGAGATTGA
CTACATTCTGTTCATCCAGGCGGACGTCGATTTGAATGTCAACCCCAACG
AAGTGCGCGACACGCGGTACGTGTCGGCGGACGAGCTGAAGCAGATGTTC
GAGCAACCGGGACTGAAGTTCACGCCGTGGTTCAAGCTGATCTGCAATTC
GATGCTTTTCGAGTGGTGGAGCCATCTGGGCTCGGCGTCGCTTGAAGGAT
ACAAGAACGAGCAGCAGATCCGGAGGATGTAAATGAGTGCCACCACTACC
GTCACCGAGCCGCCGAGAATCACGGCTGAGAACGTCGCGACTCTCTTCCC
CGAGGTTGACACTTCTCTGGCGCGGGAGGTGCTCCCCACTGCGACAAGCA
ATGCCTCCGCCCCCGGCGACGAGCTTGCCGGTTATGATGAGGAACAGGTC
CGCCTGATGGAAGAGGTGTGTATTGTGCTGGATGAAGATGACAAGCCCAT
TGGCAGTGCCAGCAAGAAGGCCTGCCACTTGATGACCAACATTGATCGCG
GCCTCCTCCACCGTGCTTTCTCCGTATTCCTTTTCGACTCGAACAAGCGT
CTGCTGCTTCAACAACGTGCGACCGAGAAGATCACCTTCCCCGACATGTG
GACGAACACCTGCTGCTCCCATCCCCTGGGCATCCCTGGAGAGACGGGCT
CGCAGCTCGATGCGGCCGTGCTGGGCGTGAAGCGCGCGGCGCAGCGCAAG
CTGGAACACGAGCTTGGTATCAAACCGGAGCAGGTGCCGCTGGACAAGTT
TGAGTTCTTCACCCGCATCCACTACAAGGCGCCCAGTGATGGCAAATGGG
GAGAGCACGAGATTGACTACATTCTGTTCATCCAGGCGGACGTCGATTTG
AATGTCAACCCCAACGAAGTGCGCGACACGCGGTACGTGTCGGCGGACGA
GCTGAAGCAGATGTTCGAGCAACCGGGACTGAAGTTCACGCCGTGGTTCA
AGCTGATCTGCAATTCGATGCTTTTCGAGTGGTGGAGCCATCTGGGCTCG
GCGTCGCTTGAAGGATACAAGAACGAGCAGCAGATCCGGAGGATGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004452isopentenyl-diphosphate delta-isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDI1KYF_011302Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011302-T1.exon1KYF_011302-T1.exon1Aspergillus niger KYF3exon
KYF_011302-T1.exon2KYF_011302-T1.exon2Aspergillus niger KYF3exon
KYF_011302-T1.exon3KYF_011302-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011302-T1.cdsKYF_011302-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011302-T1KYF_011302-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926458I
DBxrefInterPro:IPR015797
DBxrefInterPro:IPR000086
DBxrefInterPro:IPR011876
DBxrefPFAM:PF00293
Productisopentenyl-diphosphate delta-isomerase idi1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3920744..3921675 +
Powered by Drupal