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KYF_011306-T1, KYF_011306-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011306-T1
Unique NameKYF_011306-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3926995..3929793+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011306-T1 ID=KYF_011306-T1|Name=KYF_011306-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2799bp|location=Sequence derived from alignment at ch8:3926995..3929793+ (Aspergillus niger KYF3)
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACAT
CACCAATGCGCTGTTTCAAAATGACAGCGACTCCGACAACGAGGCCCCCG
CGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTAT
CGCGGAGACGCAGGCATCTGCGAACCGAAAGGCGTCGAATTTGAAGGGTC
GCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCA
GCGCAAGACGATCCCAGTGATTATGGAGGATCAGGATGTCGTGGGCATGG
CGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTCGGAGCCCGTGGGCTGATCTTGTC
GCCGTCGCGTGAGTTGGCGCTGCAGACTTTGAAGGTCGTGAAGGAGCTTG
GTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTCTG
GAGGAACAGTTCTCTATGATGGCTGGTAACCCCGATATTGTGATTGCGAC
GCCCGGTCGGTTCCTGCACTTGAAGGTCGAAATGAACCTCGATTTGTCGA
GTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGTCA
GACCCTGCTTTTCTCGGCTACCCTGCCCAAATCCCTGGTGGAATTCGCGC
GCGCTGGTCTGCAGGAGCCTACGCTTGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAA
GGAGGGCGCGCTGATGTATATCCTCCACAACGTGATTAAGATGCCTACGG
GTCCGACGGAGGCCGCACAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAA
CTTTAAGGAGTCGCCCACGAAGCATTCCACGATCATTTTCGCCGCTACCA
AGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGT
GCACAACTTCCGTACCGGCATTTCGAACATCCTGGTCGTCACTGACGTCG
CAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCG
TGCTGGCCGCACCGGTTGGAGTTACAGTCTGGTCCGCGATTCCGATGCCC
CCTACCTGCTCGATCTACAGCTGTTCCTCGGCCGGCGACTAGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGG
CTTCCCCCGCGACGGCCTGTCTCAGAGCTGCGAGTGGGTGAACAAGGTCT
TGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACACGTAACGCCGCATCCTTGGAGAGTGCCAA
GCGCTCGAAAGAGGTCGTTTCGTCCGACAATTGGACGGCCCTGCACCCTC
TGTTCAACGACGAGACCAGCCAACTCGAAGCTGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAA
CCGCCGCAGCGGCAAGCCCGAGAACGAGGAGGCGCTCACGACAATCAAGC
GCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGC
CGACGACGCCGAAGATGGTGCCTTCTCCGACGAAGACGAAGCCGGCGAAG
GCGCCGCCGACAACATGTCACTTGCCTCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCAG
TGCCACCTCCTTCCAGAACCCCGAATACTTCATGTCCTACACCCCCAACA
ACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGA
TGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCACCATGATGCGCTGGGACA
AGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTT
CCGCAGTGGACGCTTCGACGCCTGGAAGAAGGGCAAGCGACTGACTCGTC
TGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAA
GCGGGCTGATCCGCTCCGCGGAGATTATGATAAGATGAAGAAGAAGAATG
AGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTCGGAGGAGCCGCGGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTT
GAAGCAGAAGAGACGCGAGAAGAATGCTCGACCGTCGAGGAAGAAGTAG
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Coding sequence (CDS) from alignment at ch8:3926995..3929793+

>KYF_011306-T1 ID=KYF_011306-T1|Name=KYF_011306-T1|organism=Aspergillus niger KYF3|type=CDS|length=2799bp|location=Sequence derived from alignment at ch8:3926995..3929793+ (Aspergillus niger KYF3)
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACAT
CACCAATGCGCTGTTTCAAAATGACAGCGACTCCGACAACGAGGCCCCCG
CGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTAT
CGCGGAGACGCAGGCATCTGCGAACCGAAAGGCGTCGAATTTGAAGGGTC
GCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCA
GCGCAAGACGATCCCAGTGATTATGGAGGATCAGGATGTCGTGGGCATGG
CGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTCGGAGCCCGTGGGCTGATCTTGTC
GCCGTCGCGTGAGTTGGCGCTGCAGACTTTGAAGGTCGTGAAGGAGCTTG
GTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTCTG
GAGGAACAGTTCTCTATGATGGCTGGTAACCCCGATATTGTGATTGCGAC
GCCCGGTCGGTTCCTGCACTTGAAGGTCGAAATGAACCTCGATTTGTCGA
GTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGTCA
GACCCTGCTTTTCTCGGCTACCCTGCCCAAATCCCTGGTGGAATTCGCGC
GCGCTGGTCTGCAGGAGCCTACGCTTGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAA
GGAGGGCGCGCTGATGTATATCCTCCACAACGTGATTAAGATGCCTACGG
GTCCGACGGAGGCCGCACAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAA
CTTTAAGGAGTCGCCCACGAAGCATTCCACGATCATTTTCGCCGCTACCA
AGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGT
GCACAACTTCCGTACCGGCATTTCGAACATCCTGGTCGTCACTGACGTCG
CAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCG
TGCTGGCCGCACCGGTTGGAGTTACAGTCTGGTCCGCGATTCCGATGCCC
CCTACCTGCTCGATCTACAGCTGTTCCTCGGCCGGCGACTAGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGG
CTTCCCCCGCGACGGCCTGTCTCAGAGCTGCGAGTGGGTGAACAAGGTCT
TGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACACGTAACGCCGCATCCTTGGAGAGTGCCAA
GCGCTCGAAAGAGGTCGTTTCGTCCGACAATTGGACGGCCCTGCACCCTC
TGTTCAACGACGAGACCAGCCAACTCGAAGCTGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAA
CCGCCGCAGCGGCAAGCCCGAGAACGAGGAGGCGCTCACGACAATCAAGC
GCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGC
CGACGACGCCGAAGATGGTGCCTTCTCCGACGAAGACGAAGCCGGCGAAG
GCGCCGCCGACAACATGTCACTTGCCTCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCAG
TGCCACCTCCTTCCAGAACCCCGAATACTTCATGTCCTACACCCCCAACA
ACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGA
TGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCACCATGATGCGCTGGGACA
AGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTT
CCGCAGTGGACGCTTCGACGCCTGGAAGAAGGGCAAGCGACTGACTCGTC
TGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAA
GCGGGCTGATCCGCTCCGCGGAGATTATGATAAGATGAAGAAGAAGAATG
AGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTCGGAGGAGCCGCGGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTT
GAAGCAGAAGAGACGCGAGAAGAATGCTCGACCGTCGAGGAAGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0005524ATP binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP10KYF_011306Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011306-T1.exon1KYF_011306-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011306-T1.cdsKYF_011306-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011306-T1KYF_011306-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR012541
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
DBxrefPFAM:PF08147
ProductATP-dependent RNA helicase dbp10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3926995..3929793 +
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