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KYF_011394-T1, KYF_011394-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011394-T1
Unique NameKYF_011394-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4192244..4193129+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011394-T1 ID=KYF_011394-T1|Name=KYF_011394-T1|organism=Aspergillus niger KYF3|type=mRNA|length=886bp|location=Sequence derived from alignment at ch8:4192244..4193129+ (Aspergillus niger KYF3)
ATGTGTACGTGAATGACCCTGAAATCGGATTTCCAACCCTGCCTATTTGA
TTTCCGTCGCTGTTCGTTTTTTGCCGGTCATTTTTGGAGGAAATATTCAT
CGCTGGGGTTTTGGAGAAAAGAGAAAAGGACTATCATCGCGGATATAGAC
GGCAGCAACAGCAGCGACGGAATCATTGAATATTTTTCATCATCATCATG
GCAACAACCGATTTCTTAAGACAGAAAGGCTGACTTGCGGTTTTTGGAAT
TTTTTAGCGCTCGTGTCCGGCGAGAAGACGAACTTCCAGTACATTCTGCG
TCTGCTCAACACCAATGTTGACGGCAAGCAGAAGATCATGTACGCCTTGA
CCCAGATCAAGGGTGTTGGTCGCCGTTACTCCAACTTGGTCTGCAAGAAG
GCCGACGTTGACCTCAGCAAGCGGTACGTTTACACTACACTACATTTCTC
GATGGTTCGAATGCGAGGCAGGGGATAAAAGAGTGGGAGTGGATTCCACG
GACAAGAGAAGGGAGAAGAGCAAACACCACGAGGTTGAAAGGGCAGGAGA
TACAAGAACAGCCAAGTTGACTTTCCTACTTTCTACAGCGCTGGTGAACT
CACCACCGAAGAGCTCGAGCGTATCGTCACCATCCTCCAGAGCCCCACCC
AGTACAAGATCCCCACCTGGTTCCTCAACAGACAGCGCGACATCACCGAT
GGCAAGGACTCCCAGGTCGTCTCCAACTCCCTCGACAGCAAGATCCGTGA
GGATCTCGAGCGCCTGAAGAAGATCCGCTCCCACCGTGGTCTCCGTCACT
ACTGGGGTCTCCGTGTCCGCGGTCAGCACACCAAGACCACCGGTCGTCGT
GGACGCACCGTCGGTGTCAGCAAGAAGAAGAACTAA
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Coding sequence (CDS) from alignment at ch8:4192244..4193129+

>KYF_011394-T1 ID=KYF_011394-T1|Name=KYF_011394-T1|organism=Aspergillus niger KYF3|type=CDS|length=1404bp|location=Sequence derived from alignment at ch8:4192244..4193129+ (Aspergillus niger KYF3)
ATGTCGCTCGTGTCCGGCGAGAAGACGAACTTCCAGTACATTCTGCGTCT
GCTCAACACCAATGTTGACGGCAAGCAGAAGATCATGTACGCCTTGACCC
AGATCAAGGGTGTTGGTCGCCGTTACTCCAACTTGGTCTGCAAGAAGGCC
GACGTTGACCTCAGCAAGCGCGCTGGTGAACTCACCACCGAAGAGCTCGA
GCGTATCGTCACCATCCTCCAGAGCCCCACCCAGTACAAGATCCCCACCT
GGTTCCTCAACAGACAGCGCGACATCACCGATGGCAAGGACTCCCAGGTC
GTCTCCAACTCCCTCGACAGCAAGATCCGTGAGGATCTCGAGCGCCTGAA
GAAGATCCGCTCCCACCGTGGTCTCCGTCACTACTGGGGTCTCCGTGTCC
GCGGTCAGCACACCAAGACCACCGGTCGTCGTGGACGCACCGTCGGTGTC
AGCAAGAAGAAGAACTAAATGTCGCTCGTGTCCGGCGAGAAGACGAACTT
CCAGTACATTCTGCGTCTGCTCAACACCAATGTTGACGGCAAGCAGAAGA
TCATGTACGCCTTGACCCAGATCAAGGGTGTTGGTCGCCGTTACTCCAAC
TTGGTCTGCAAGAAGGCCGACGTTGACCTCAGCAAGCGCGCTGGTGAACT
CACCACCGAAGAGCTCGAGCGTATCGTCACCATCCTCCAGAGCCCCACCC
AGTACAAGATCCCCACCTGGTTCCTCAACAGACAGCGCGACATCACCGAT
GGCAAGGACTCCCAGGTCGTCTCCAACTCCCTCGACAGCAAGATCCGTGA
GGATCTCGAGCGCCTGAAGAAGATCCGCTCCCACCGTGGTCTCCGTCACT
ACTGGGGTCTCCGTGTCCGCGGTCAGCACACCAAGACCACCGGTCGTCGT
GGACGCACCGTCGGTGTCAGCAAGAAGAAGAACTAAATGTCGCTCGTGTC
CGGCGAGAAGACGAACTTCCAGTACATTCTGCGTCTGCTCAACACCAATG
TTGACGGCAAGCAGAAGATCATGTACGCCTTGACCCAGATCAAGGGTGTT
GGTCGCCGTTACTCCAACTTGGTCTGCAAGAAGGCCGACGTTGACCTCAG
CAAGCGCGCTGGTGAACTCACCACCGAAGAGCTCGAGCGTATCGTCACCA
TCCTCCAGAGCCCCACCCAGTACAAGATCCCCACCTGGTTCCTCAACAGA
CAGCGCGACATCACCGATGGCAAGGACTCCCAGGTCGTCTCCAACTCCCT
CGACAGCAAGATCCGTGAGGATCTCGAGCGCCTGAAGAAGATCCGCTCCC
ACCGTGGTCTCCGTCACTACTGGGGTCTCCGTGTCCGCGGTCAGCACACC
AAGACCACCGGTCGTCGTGGACGCACCGTCGGTGTCAGCAAGAAGAAGAA
CTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS18KYF_011394Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011394-T1.exon1KYF_011394-T1.exon1Aspergillus niger KYF3exon
KYF_011394-T1.exon2KYF_011394-T1.exon2Aspergillus niger KYF3exon
KYF_011394-T1.exon3KYF_011394-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011394-T1.cdsKYF_011394-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011394-T1KYF_011394-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264YEG
DBxrefInterPro:IPR010979
DBxrefInterPro:IPR018269
DBxrefInterPro:IPR001892
DBxrefInterPro:IPR027437
DBxrefPFAM:PF00416
Productribosomal 40S subunit protein S18B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4192244..4193129 +
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