You are here

Home

KYF_011744-T1, KYF_011744-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_011744-T1
Unique NameKYF_011744-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:5228550..5229206+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_011744-T1 ID=KYF_011744-T1|Name=KYF_011744-T1|organism=Aspergillus niger KYF3|type=mRNA|length=657bp|location=Sequence derived from alignment at ch8:5228550..5229206+ (Aspergillus niger KYF3)
ATGCAACCCATCACTCTCTACTCGCACCCTATCGGGCCTAATCCGTGGAA
GGTCGCCATCATCCTCTCCGCTCTGCACATCCCCTACGAAATGGTCATGA
TTGACTTCACCGAGGTGAAAAAGGAGCCCTACGTGAGCCTCTGTCCCAAT
GGACGGCTGCCAACCATCGTGGATCCCAACAAGAACATCACCTTGTGGGA
ATCAGGCGCCATTGTGAACTACCTGATTGAGACCTACGATCAGAGCCACC
AGCTGAGCTATGACACCTTTCCCGAGCGCCACCAGCTGCAACAATGGCTG
CATTTCCAAGTGTCCGGGCAAGGGCCGTACTACGGACAGTTAGGCTGGTT
CCGGCGGCAGCCCGAGCAGGTGCCCCAGGCCATCGAACGCTACACAGCGG
AGATCCGGCGCGTCATGAGTGTGCTAGACCAGGTGTTGACGGACCGCGAA
TGGCTTGTGGGCGACAAGTGCACGTATGCAGACCTCTCCTTTGTCCCCTG
GCAGGATCTGGTGCCGTTGGTGGTCGGGGACCAGCGCGTGGTACAGGAAT
TGACCGAGCAATTTCCCCATGTGGAGGCGTGGATGCAGAGAATGAGGGCG
AGACCAGAGGTACAGAAAGTGCTGAAGGAGAAGAGCGAGGCGATGGCGTT
GAATTAG
back to top

Coding sequence (CDS) from alignment at ch8:5228550..5229206+

>KYF_011744-T1 ID=KYF_011744-T1|Name=KYF_011744-T1|organism=Aspergillus niger KYF3|type=CDS|length=657bp|location=Sequence derived from alignment at ch8:5228550..5229206+ (Aspergillus niger KYF3)
ATGCAACCCATCACTCTCTACTCGCACCCTATCGGGCCTAATCCGTGGAA
GGTCGCCATCATCCTCTCCGCTCTGCACATCCCCTACGAAATGGTCATGA
TTGACTTCACCGAGGTGAAAAAGGAGCCCTACGTGAGCCTCTGTCCCAAT
GGACGGCTGCCAACCATCGTGGATCCCAACAAGAACATCACCTTGTGGGA
ATCAGGCGCCATTGTGAACTACCTGATTGAGACCTACGATCAGAGCCACC
AGCTGAGCTATGACACCTTTCCCGAGCGCCACCAGCTGCAACAATGGCTG
CATTTCCAAGTGTCCGGGCAAGGGCCGTACTACGGACAGTTAGGCTGGTT
CCGGCGGCAGCCCGAGCAGGTGCCCCAGGCCATCGAACGCTACACAGCGG
AGATCCGGCGCGTCATGAGTGTGCTAGACCAGGTGTTGACGGACCGCGAA
TGGCTTGTGGGCGACAAGTGCACGTATGCAGACCTCTCCTTTGTCCCCTG
GCAGGATCTGGTGCCGTTGGTGGTCGGGGACCAGCGCGTGGTACAGGAAT
TGACCGAGCAATTTCCCCATGTGGAGGCGTGGATGCAGAGAATGAGGGCG
AGACCAGAGGTACAGAAAGTGCTGAAGGAGAAGAGCGAGGCGATGGCGTT
GAATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_011744KYF_011744Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011744-T1.exon1KYF_011744-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_011744-T1.cdsKYF_011744-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_011744-T1KYF_011744-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:5228550..5229206 +
Powered by Drupal