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ATCC64974_101630-T1, ATCC64974_101630-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_101630-T1
Unique NameATCC64974_101630-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1850722..1851822+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_101630-T1 ID=ATCC64974_101630-T1|Name=ATCC64974_101630-T1|organism=Aspergillus niger N402|type=mRNA|length=1101bp|location=Sequence derived from alignment at OGUI01000017.1:1850722..1851822+ (Aspergillus niger N402)
ATGGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACGAACCA
CTCGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAAATACA
AGGATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGACCATAC
GATTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTTATCAA
CGCTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCA
CAAAGGTGGTGGCCATGCTTCATACTGCATCGTTACTGTAAGCTGTTTTC
ATCGTGCCTCGGTTTAGTCTGGACACCTACCTGACCTATGGCGTATGAGC
CAGGATCGATGATGTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCG
TAGCTCATAACATATACGGCACCGCGCAAACCATCAACTCTGCGAACTAT
GTATATTTCCTTGCTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGC
GATTGACATCTACGTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAA
TGGATCTCTTCTGGCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTAT
TTGGAAATGGTCGGTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAA
GTTGATGCAGGCTGAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCA
ACGTCATGGGGCTGATTTTCCAAATCTGCGACGACTACCTCAACCTGTCC
AACACTACGTACACCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGG
AAAGTTCTCCTTTCCCATCATTCATAGTATCCGATCCAACCCCGGAAACC
ACCAGCTCCTGAGTATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAA
CTGTATGCAGTCAGTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCG
GGACGTGGTCCGAGAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGA
TCGATGGTGACCAAGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCG
ATCCTCAACAAGATCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTA
G
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Coding sequence (CDS) from alignment at OGUI01000017.1:1850722..1851822+

>ATCC64974_101630-T1 ID=ATCC64974_101630-T1|Name=ATCC64974_101630-T1|organism=Aspergillus niger N402|type=CDS|length=2070bp|location=Sequence derived from alignment at OGUI01000017.1:1850722..1851822+ (Aspergillus niger N402)
ATGGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACGAACCA
CTCGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAAATACA
AGGATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGACCATAC
GATTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTTATCAA
CGCTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCA
CAAAGGTGGTGGCCATGCTTCATACTGCATCGTTACTGATCGATGATGTC
GAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAACATATA
CGGCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCTTGCTC
TGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCTACGTC
CAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTCTGGCG
AGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTA
ACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAA
AGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGGCTGAT
TTTCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTACACCA
AGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCC
ATCATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTGAGTAT
TCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGTCAGTT
ACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAA
TTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGACCAAGC
AGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAAGATCA
CCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGATGGATCACACAGGC
CCGGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCACAA
TCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATGGT
CGCCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTACAG
CACCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTATG
GTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGCCA
TGCTTCATACTGCATCGTTACTGATCGATGATGTCGAGGATAACTCTATT
TTGCGACGCGGTATTCCCGTAGCTCATAACATATACGGCACCGCGCAAAC
CATCAACTCTGCGAACTATGTATATTTCCTTGCTCTGCAAGAGGTGCAAA
AGTTGAACAACCCCGCTGCGATTGACATCTACGTCCAAGAGTTATTGAAC
CTACACCGCGGTCAAGGAATGGATCTCTTCTGGCGAGATACTCTGACTTG
CCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTAACAAAACTGGGGGTT
TGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAAAGTAGCTCCGGAAAG
GACTGCGTGAGCCTCGTCAACGTCATGGGGCTGATTTTCCAAATCTGCGA
CGACTACCTCAACCTGTCCAACACTACGTACACCAAGAACAAAGGTCTTT
GTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCCATCATTCATAGTATC
CGATCCAACCCCGGAAACCACCAGCTCCTGAGTATTCTCAAGCAAAAGAC
GAAAGATGACGAAGTCAAACTGTATGCAGTCAGTTACATGGAGAGCACTG
GCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAATTGCGAGCCAAAGCA
CTGACCCTAATTCAAGCGATCGATGGTGACCAAGCAGATGGACGCGAAGA
CGGCGCCATGGTTCGGGCGATCCTCAACAAGATCACCGAGTCGACACTGG
GGGAGTGTGGTCCCCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AL3ATCC64974_101630Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101630-T1.exon1ATCC64974_101630-T1.exon1Aspergillus niger N402exon
ATCC64974_101630-T1.exon2ATCC64974_101630-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101630-T1.cdsATCC64974_101630-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_101630-T1ATCC64974_101630-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000171.5
NoteSMCOG1182:Polyprenyl synthetase
DBxrefInterPro:IPR033749
DBxrefInterPro:IPR000092
DBxrefInterPro:IPR008949
DBxrefPFAM:PF00348
Productfarnesyltranstransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1850722..1851822 +
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