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ATCC64974_103250-T1, ATCC64974_103250-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103250-T1
Unique NameATCC64974_103250-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2369914..2370296-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103250-T1 ID=ATCC64974_103250-T1|Name=ATCC64974_103250-T1|organism=Aspergillus niger N402|type=mRNA|length=383bp|location=Sequence derived from alignment at OGUI01000017.1:2369914..2370296- (Aspergillus niger N402)
ATGTCGCTTCACTCTTATATTAACAGTAAGTTTGGTCTCAAGAGATCCAT
TTCATGTCTGGGATTTAGTCTCATGGTCAGTGCTAACGTATGTGGTTTTA
CCCCGATATAGAGAAAGTATGCATCCTGACGGTTGACGGACGGACACTCC
TGGGGACATTACTCTCGACCGACCAGCTCACGAACCTGGTTCTCCTGGAC
ACGATCGAGCGAATCATCCGGACCCCCGACGACCCGGAACCCAGTTCCCA
GATTGAACATGGGCTGTATCTGATCCGAGGCGACAACGTTGTATTATGCG
GAGAGGTGGACGAAGCCATTGACAACGACATCGACTGGACGAAGGTCAGG
GGAGAAGTGGTCAAAGGTACCAAGAACGCATGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2369914..2370296-

>ATCC64974_103250-T1 ID=ATCC64974_103250-T1|Name=ATCC64974_103250-T1|organism=Aspergillus niger N402|type=CDS|length=594bp|location=Sequence derived from alignment at OGUI01000017.1:2369914..2370296- (Aspergillus niger N402)
AGAAAGTATGCATCCTGACGGTTGACGGACGGACACTCCTGGGGACATTA
CTCTCGACCGACCAGCTCACGAACCTGGTTCTCCTGGACACGATCGAGCG
AATCATCCGGACCCCCGACGACCCGGAACCCAGTTCCCAGATTGAACATG
GGCTGTATCTGATCCGAGGCGACAACGTTGTATTATGCGGAGAGGTGGAC
GAAGCCATTGACAACGACATCGACTGGACGAAGGTCAGGGGAGAAGTGGT
CAAAGGTACCAAGAACGCATGAATGTCGCTTCACTCTTATATTAACAAGA
AAGTATGCATCCTGACGGTTGACGGACGGACACTCCTGGGGACATTACTC
TCGACCGACCAGCTCACGAACCTGGTTCTCCTGGACACGATCGAGCGAAT
CATCCGGACCCCCGACGACCCGGAACCCAGTTCCCAGATTGAACATGGGC
TGTATCTGATCCGAGGCGACAACGTTGTATTATGCGGAGAGGTGGACGAA
GCCATTGACAACGACATCGACTGGACGAAGGTCAGGGGAGAAGTGGTCAA
AGGTACCAAGAACGCATGAATGTCGCTTCACTCTTATATTAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
GO:0005688U6 snRNP
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103250ATCC64974_103250Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103250-T1ATCC64974_103250-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103250-T1.cdsATCC64974_103250-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103250-T1.exon2ATCC64974_103250-T1.exon2Aspergillus niger N402exon
ATCC64974_103250-T1.exon1ATCC64974_103250-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034103
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2369914..2370296 -
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