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ATCC64974_103480-T1, ATCC64974_103480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_103480-T1
Unique NameATCC64974_103480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2434157..2435051-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_103480-T1 ID=ATCC64974_103480-T1|Name=ATCC64974_103480-T1|organism=Aspergillus niger N402|type=mRNA|length=895bp|location=Sequence derived from alignment at OGUI01000017.1:2434157..2435051- (Aspergillus niger N402)
ATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAGGA
GATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCATCC
TGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTGGT
CAGTCCTCCTCTTCCTCCTCCCTCTCCTCGGTCCAGACACAGCAGAACTT
GGCATCGATCAGTTGTTGGGCTTGGCTCAATACCGGAACGGAATGATATC
GAACATGGAACGCAAATCAATTCACGATGAGAGAACACAAAACTGACTGG
TGTTGTTCTGTGCTGTGCAGGTTTCAACGTCGAGACCGTCGAATACAAGA
ACATTCAGTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCT
CTCTGGAGACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGA
CAGCAATGACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCA
TGTTGAACGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAAC
AAGCAAGATTTGCCGGTATGCTTGAAATCCACTTCTTGTGCAACAATGTG
GGGGCCGAAACAATGGATATTGACCGTGTGATTTCTTTTTCTTCTAGAAC
GCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCAC
CCGCCGTCCCTGGGTAAGTTATACCCCCCTCGCATGTCGACACCTGAGGT
GTCTATTCCCGAGGATCGAACCCCAACTAACGCGCTTGCTTCCCTTTTCT
AGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGT
CTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:2434157..2435051-

>ATCC64974_103480-T1 ID=ATCC64974_103480-T1|Name=ATCC64974_103480-T1|organism=Aspergillus niger N402|type=CDS|length=2208bp|location=Sequence derived from alignment at OGUI01000017.1:2434157..2435051- (Aspergillus niger N402)
TACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGTCT
GGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAAACGCCA
TGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCCGC
CGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTC
ACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACA
CTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACC
GTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAG
GATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTT
GCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCA
AGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACC
ATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGAT
TGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGT
CTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAAACGC
CATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCC
GCCGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGT
TCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGA
CACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGA
CCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACG
AGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGAT
TTGCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCG
CAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCA
CCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACG
ATTGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGG
GTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAAAC
GCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCAC
CCGCCGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCA
GTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGA
GACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAAT
GACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAA
CGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAG
ATTTGCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGC
CGCAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAAC
CACCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCA
CGATTGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGA
GGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAA
ACGCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTC
ACCCGCCGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATT
CAGTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTG
GAGACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCA
ATGACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTG
AACGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCA
AGATTTGCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGG
GCCGCAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAA
ACCACCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCC
CACGATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_103480ATCC64974_103480Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103480-T1ATCC64974_103480-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103480-T1.cdsATCC64974_103480-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_103480-T1.exon4ATCC64974_103480-T1.exon4Aspergillus niger N402exon
ATCC64974_103480-T1.exon3ATCC64974_103480-T1.exon3Aspergillus niger N402exon
ATCC64974_103480-T1.exon2ATCC64974_103480-T1.exon2Aspergillus niger N402exon
ATCC64974_103480-T1.exon1ATCC64974_103480-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2434157..2435051 -
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