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ATCC64974_10360-T1, ATCC64974_10360-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_10360-T1
Unique NameATCC64974_10360-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:910005..911723+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_10360-T1 ID=ATCC64974_10360-T1|Name=ATCC64974_10360-T1|organism=Aspergillus niger N402|type=mRNA|length=1719bp|location=Sequence derived from alignment at OGUI01000002.1:910005..911723+ (Aspergillus niger N402)
ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGG
GTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCT
CTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT
GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGAC
CAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTG
CTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA
GTGAGTTTACCATTTAGATGCATCATCACGCTTTGATTACTGATTCAGTC
TAGGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGAC
CACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGG
CGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGC
AACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGC
CGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCAT
CGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTT
GCTGGTGAAACCGTAAGTCATATCCTTCCTATATTAGGGCCAACCGCCAT
ACTAACGGAGAGTCCGACAGACCTTCGGTGACACCTACGACAGCGACTTC
GACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGG
ACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCA
ACGGCGGACAGGACAAGTACGAGCCTACCACCACAGCCCTTTCATGAAGA
ACCCTACTCATAGCTCCTACCAGGCCCGACCACTTCATTGTCGTCAAGGA
CATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCC
ACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC
CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCC
GGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGA
CCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC
AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGG
TCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCG
TCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC
AAGTCTAATGCTGATACCACTGGCGAGGTTAGTCCATCCTATCTTAACCA
TCAACATCTTATTATTCTAACCACCGAGCAAATACAGGTCTACAACGTCA
AGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATC
CAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGT
CAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACG
GCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTC
TTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCC
CTCTTCGGGATGCCCTTAA
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Coding sequence (CDS) from alignment at OGUI01000002.1:910005..911723+

>ATCC64974_10360-T1 ID=ATCC64974_10360-T1|Name=ATCC64974_10360-T1|organism=Aspergillus niger N402|type=CDS|length=7455bp|location=Sequence derived from alignment at OGUI01000002.1:910005..911723+ (Aspergillus niger N402)
ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGG
GTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCT
CTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT
GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGAC
CAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTG
CTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA
GGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCAC
TTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGG
CTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAAC
GGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGT
CGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCATCGA
GCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCT
GGTGAAACCACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGT
CATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCA
ACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAG
GACAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGAT
CGAGAACCTCAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGA
ACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGT
GACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGA
CGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGG
TGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTC
GTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCAT
CGGCGGCAAGAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCC
AGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACC
ACTGGCGAGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCAT
CAGCGACTACGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTA
CCGGTGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAAT
GTCAAGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGA
TGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTA
GCGATGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAATGATGAAG
CGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAG
CGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCG
CCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACT
GGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCT
CTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTT
CCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGGCAAGGCA
CCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACAC
CACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCT
CCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACT
ACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTG
CTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCG
ATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACC
ACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGG
TACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACG
GTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGCCC
GACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCT
CAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGT
ACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCC
AACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGA
CATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACC
AGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAAC
CTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAA
GAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTA
ACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAG
GTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTA
CGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACC
CGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGT
ACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTG
CTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATA
GCTGCAACTACCCCTCTTCGGGATGCCCTTAAATGATGAAGCGCAGCGCG
CTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGAC
TCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCT
TCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCG
GATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGC
CTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGG
CTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGGCAAGGCACCTGCTGTT
GCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGT
TCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTG
TCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACA
GTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACAT
CCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGG
GTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCACCTTCGGT
GACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGT
GACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCT
ACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGCCCGACCACTTC
ATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCT
GAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCA
TCTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAG
AGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCA
GAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACT
GTGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGC
TACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAA
CACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGA
ACGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGGTCTACAAC
GTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGA
CATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACG
GCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGC
GACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTT
TGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACT
ACCCCTCTTCGGGATGCCCTTAAATGATGAAGCGCAGCGCGCTCCTTGCC
TCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTG
TGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCA
CCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTC
CTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTG
CCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGG
CAGTCTCCAGCAGCAGCAAGGTAGGCAAGGCACCTGCTGTTGCAGCCACT
CGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCC
CCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGG
CGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAG
TACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTC
CAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGA
CCGGTGCGGCTGTCATCTTTGCTGGTGAAACCACCTTCGGTGACACCTAC
GACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATCAC
CGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACG
GCGAGGGATCCAACGGCGGACAGGACAAGCCCGACCACTTCATTGTCGTC
AAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCC
CGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCC
TGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGC
GACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTT
CCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCG
TTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGT
CACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGA
CGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCC
GCATCAAGTCTAATGCTGATACCACTGGCGAGGTCTACAACGTCAAGTAC
GAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCA
GGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGA
TCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAG
GATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCAC
TGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTT
CGGGATGCCCTTAAATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTT
CCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGC
CTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGG
CGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAAC
TGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCAC
CGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCA
GCAGCAGCAAGGTAGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCG
GCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCAC
CTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCT
CCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCG
ATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAA
CGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGG
CTGTCATCTTTGCTGGTGAAACCACCTTCGGTGACACCTACGACAGCGAC
TTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGA
GGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGAT
CCAACGGCGGACAGGACAAGCCCGACCACTTCATTGTCGTCAAGGACATG
TACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCCACTG
CTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATCCTCA
ACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCC
GCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCT
CTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACCAGCG
GTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGGTCTC
TCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCGTCAC
CTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGT
CTAATGCTGATACCACTGGCGAGGTCTACAACGTCAAGTACGAAAACATC
ACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCAGGACTACGA
GAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACA
TCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAGGATTACTAC
ATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGA
CATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCC
CTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_10360ATCC64974_10360Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10360-T1ATCC64974_10360-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10360-T1.exon1ATCC64974_10360-T1.exon1Aspergillus niger N402exon
ATCC64974_10360-T1.exon2ATCC64974_10360-T1.exon2Aspergillus niger N402exon
ATCC64974_10360-T1.exon3ATCC64974_10360-T1.exon3Aspergillus niger N402exon
ATCC64974_10360-T1.exon4ATCC64974_10360-T1.exon4Aspergillus niger N402exon
ATCC64974_10360-T1.exon5ATCC64974_10360-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_10360-T1.cdsATCC64974_10360-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:910005..911723 +
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