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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:2552882..2553969+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_103830-T1 ID=ATCC64974_103830-T1|Name=ATCC64974_103830-T1|organism=Aspergillus niger N402|type=mRNA|length=1088bp|location=Sequence derived from alignment at OGUI01000017.1:2552882..2553969+ (Aspergillus niger N402)
ATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTCGAGCGG
TACATACCTCACCCATCCGTCCAATTCGTACGTCCAGAAAACCAAATCTA
ACGAAGTAAAACTACAGAGAAGAAAATCCGCGACAAAGCCACCGACTCTC
TCTCACTCTTCCTCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTC
AAACTATGGAAGGGTCTATTCTTCTGTACGCTACATCTCTTCCCCAAATA
TCACACCGCCACAAACACCAACTAATCATGTATTTAACCAGGCTTCTACC
ACTCCGACCGTCCCCTAACGCAACAAGCACTCGCCCGCACTCTCAGCTAC
AGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGCATCGCTTCCTCCGCGC
CTTCTGGATAACCATTGGACGGGACTTCCACTCACTCGACCGTCTCCGTC
TAGACAAGTACCTATTCCTGATCCGTTGCTACGTGGGCGTTGCATTTGAG
GTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCAGCACCACATCCACAAA
CGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACATCATCAAAGCGGAATA
AGAAGAACAACAAGAACAAGAAACAAACCCAACAAGAAGAATCCACATCA
TCAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCCTCGAATCCTACAT
CACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAACTTTGACCCGGATC
AACCGCCCATGAACGAGAAGGAAGATTACGTGCCCATGCCGCATGGACCG
GACGGATTGCGGTACCATGTGATGGATATCTGGATTGATGAGTTGGAGAA
AGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAACCGAAGAAGAAGG
TCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCCGATTGAGAAGTTG
AAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGGCTGCGGAGACGCT
GGATGATGAGCGGTTGGTTGAGTGGGGGGTTAAGGAGAGGAAGGTGGTGG
AGGAGAGTAGTGATGAGGAGTGGGATGGGTTTGATTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:2552882..2553969+ >ATCC64974_103830-T1 ID=ATCC64974_103830-T1|Name=ATCC64974_103830-T1|organism=Aspergillus niger N402|type=CDS|length=2862bp|location=Sequence derived from alignment at OGUI01000017.1:2552882..2553969+ (Aspergillus niger N402)
ATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTCGAGCGA
GAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTCCGCT
CCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGGTCTA
TTCTTCTGCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCACTCGC
CCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGC
ATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCACTCA
CTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCTACGT
GGGCGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCA
GCACCACATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACA
TCATCAAAGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCCAACA
AGAAGAATCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGGTCCG
CCCTCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTG
AACTTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCC
CATGCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGGA
TTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGG
CAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAG
GCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTC
GGGCTGCGGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGTTAAG
GAGAGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGTTTGA
TTGAATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTCGA
GCGAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTC
CGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGG
TCTATTCTTCTGCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCAC
TCGCCCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACG
CTGCATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCA
CTCACTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCT
ACGTGGGCGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACC
TCCAGCACCACATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCC
TACATCATCAAAGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCC
AACAAGAAGAATCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGG
TCCGCCCTCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCC
TCTGAACTTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACG
TGCCCATGCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATC
TGGATTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGA
GGGGCAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGT
TGAGGCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGG
ACTCGGGCTGCGGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGT
TAAGGAGAGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGT
TTGATTGAATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCC
TCGAGCGAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTT
CCTCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGA
AGGGTCTATTCTTCTGCTTCTACCACTCCGACCGTCCCCTAACGCAACAA
GCACTCGCCCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAG
CACGCTGCATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACT
TCCACTCACTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCGT
TGCTACGTGGGCGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTC
CACCTCCAGCACCACATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAG
AGCCTACATCATCAAAGCGGAATAAGAAGAACAACAAGAACAAGAAACAA
ACCCAACAAGAAGAATCCACATCATCAGCAACCACCGCAGAAGAAAAAGA
CTGGTCCGCCCTCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGT
GCCCTCTGAACTTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGAT
TACGTGCCCATGCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGA
TATCTGGATTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGG
AAGAGGGGCAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTT
TTGTTGAGGCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGT
GCGGACTCGGGCTGCGGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGG
GGGTTAAGGAGAGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGAT
GGGTTTGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030688 | preribosome, small subunit precursor |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_103830-T1 | ATCC64974_103830-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092646C6 |
| DBxref | InterPro:IPR010301 |
| DBxref | PFAM:PF05997 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:2552882..2553969 + |
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