|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:2810688..2812609- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_104580-T1 ID=ATCC64974_104580-T1|Name=ATCC64974_104580-T1|organism=Aspergillus niger N402|type=mRNA|length=1922bp|location=Sequence derived from alignment at OGUI01000017.1:2810688..2812609- (Aspergillus niger N402)
ATGCCGAGTCTCGACATCCCCGGGGAATTCCTCCGACATGCTGTTCTAGA
TACAGTTGTCCCGCATGCTTCAGATGCCGACCTAGAGGCGGCTCTGACGT
CGGCTCTAGAAAAAGGCGCAGAGGACCTCACTTCTGTGTTGTCGCTCATA
CCGCAGCGTTCTCTCCTGTTCTTCGGTACGCTACGACCTGCTGGCCGGAT
CGAGCTCTATCTCTTACTCATATGTAGCGTGATACAGATGAGTTCTGCAC
CGTTCGCGTTGTCTTACGACTATCCAATTGCTCTCCACCTAGCCTGAAAC
AGTATCTTCCGCACCTCGAAGTCCGACTCGATGCCTTTGCCATTGATCCC
GCCGAGACAGTCGCGGAGAACCCGACCCCGACTCGGGACCTTATATTTTC
AGGGGTTGTAGATTCACAGGAGCCATTGGTGGTGGTCAATGAGTTTGAGG
GAGACACAGGTGGGGGCAACCACGTATATGTGATCTGGAGTGTCAAGGCA
TTCTTGAGTAAGGACTCCGTCCTTGTTCCGGCATCCTGTCGTGCTGATAA
ACCTCAGAGCGCCCTCGCATACGCATTCAACACCCTTCCCTCCTCTTCAT
CGCCTCTGCTAGCCTCAACCCAGCTGAAACCCGACAGCAAGAGCCTCGGG
GAGACGACTACCTCCCGCCCCTGATCCCCGCGTCAACAAACATTCTACAG
CCGCTGTCGAGTGATAAGTCCTTGGATCAGAAAGATCCATTCCTCCCCGC
ATCTAGGCTCCTGCGAGTTGTACCGGCGAAATACAGTGAAGACCCCATAT
ATAATGTCCAGCAACATTCCGGCCACCCCATACGCATAGTGCCTGCTGCC
AGTGCAAGGATACGTTATTCTCGGCTGAATGCCTATAGTGGACGGCCTAC
CACTGTTGCAAGCCTTGATTTTGAGGTGACACCATTCCTTAATTGCGATG
TCACATTTGACAAGGCAGAGCTTAGCATGTCGGATGGGACGATAGAAACC
CTTACAGATGCACCAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCGAGA
TGATATCACCCTTGTATACAAGTTAACGCCCGACTATGCGCCGGACCCAA
ATCCATCGACAACTGTGATGGTCAGTGTACTGGATATCTCGCTAGAAGCA
ATAATCCACCTGTCGGACAATTGTAACCCGCGGATATTGATGCAATGGAG
AACCAACGTTGATTTCTCCATGGTCCTCAACCCAACTTTTGGTGGACCTA
GCCAGGCTCTACAACGAAACAACCGCCCCGCGAGTCTTCCAATGACACCT
AACCAAAGCAACGCCGCAGCGGGGACCGCTACACCTAATCGAAGCTCTCT
GAGAGAGCGGGCATACTCAACAGCAGGCCTTGGTGTATCCGTTTCGTTCA
GTGGCCCTCCACATGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATCTTC
ATCGTGAACCGATCTTCCGGTTCCCGCAAATTCTCAATAGTTGCAATCCC
TCGCCGGAAGAAGCTGGACCCACGGGGGCATACCGTGCGACCCTCTTCTT
CATCTGCGACGAGCCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACCGAT
GATAACATTGTCCATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGA
ACTCGTTTCTCTAAGTACCGACGTTCGGGCTGGGTGGGTAGCCCCTTCAC
TCTTCCCTTTTCCTTTGCCCCAGCTGATCATATAATAGTCCCCTTTTGCC
TGGCACCTGTTTTTCTACGGAACTGAAATTGCTTCCATTGGCGGTGGGGG
CACTTCGTCTGGAAGCTGTACGTCTGGTGGATGTAAATACGAACGAGACG
ATTGATATTAAAGATCTCCCGGACATCCATTCCTTTGAAAGGAAAGGTCG
ACCGATTGAGGTGGTCAGTTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:2810688..2812609- >ATCC64974_104580-T1 ID=ATCC64974_104580-T1|Name=ATCC64974_104580-T1|organism=Aspergillus niger N402|type=CDS|length=7020bp|location=Sequence derived from alignment at OGUI01000017.1:2810688..2812609- (Aspergillus niger N402)
TCCCCTTTTGCCTGGCACCTGTTTTTCTACGGAACTGAAATTGCTTCCAT
TGGCGGTGGGGGCACTTCGTCTGGAAGCTGTACGTCTGGTGGATGTAAAT
ACGAACGAGACGATTGATATTAAAGATCTCCCGGACATCCATTCCTTTGA
AAGGAAAGGTCGACCGATTGAGGTGGTCAGTTGAAGCGCCCTCGCATACG
CATTCAACACCCTTCCCTCCTCTTCATCGCCTCTGCTAGCCTCAACCCAG
CTGAAACCCGACAGCAAGAGCCTCGGGGAGACGACTACCTCCCGCCCCTG
ATCCCCGCGTCAACAAACATTCTACAGCCGCTGTCGAGTGATAAGTCCTT
GGATCAGAAAGATCCATTCCTCCCCGCATCTAGGCTCCTGCGAGTTGTAC
CGGCGAAATACAGTGAAGACCCCATATATAATGTCCAGCAACATTCCGGC
CACCCCATACGCATAGTGCCTGCTGCCAGTGCAAGGATACGTTATTCTCG
GCTGAATGCCTATAGTGGACGGCCTACCACTGTTGCAAGCCTTGATTTTG
AGGTGACACCATTCCTTAATTGCGATGTCACATTTGACAAGGCAGAGCTT
AGCATGTCGGATGGGACGATAGAAACCCTTACAGATGCACCAGGACTGCT
GCCGCCCATCCGTTGCCAGCCGCGAGATGATATCACCCTTGTATACAAGT
TAACGCCCGACTATGCGCCGGACCCAAATCCATCGACAACTGTGATGGTC
AGTGTACTGGATATCTCGCTAGAAGCAATAATCCACCTGTCGGACAATTG
TAACCCGCGGATATTGATGCAATGGAGAACCAACGTTGATTTCTCCATGG
TCCTCAACCCAACTTTTGGTGGACCTAGCCAGGCTCTACAACGAAACAAC
CGCCCCGCGAGTCTTCCAATGACACCTAACCAAAGCAACGCCGCAGCGGG
GACCGCTACACCTAATCGAAGCTCTCTGAGAGAGCGGGCATACTCAACAG
CAGGCCTTGGTGTATCCGTTTCGTTCAGTGGCCCTCCACATGTCGAAGTA
GGAAAACCCTTTGCTTGGAGTATCTTCATCGTGAACCGATCTTCCGGTTC
CCGCAAATTCTCAATAGTTGCAATCCCTCGCCGGAAGAAGCTGGACCCAC
GGGGGCATACCGTGCGACCCTCTTCTTCATCTGCGACGAGCCGGAAAGAT
GCTCAGGTCGCAGAAGCTGTAACCGATGATAACATTGTCCATGCACTCCA
GAAGAGTGTAGTTGGCCAGGAAGCAGAACTCGTTTCTCTAAGTACCGACG
TTCGGGCTGGATGAGTTCTGCACCGTTCGCGTTGTCTTACGACTATCCAA
TTGCTCTCCACCTAGCCTGAAACAGTATCTTCCGCACCTCGAAGTCCGAC
TCGATGCCTTTGCCATTGATCCCGCCGAGACAGTCGCGGAGAACCCGACC
CCGACTCGGGACCTTATATTTTCAGGGGTTGTAGATTCACAGGAGCCATT
GGTGGTGGTCAATGAGTTTGAGGGAGACACAGGTGGGGGCAACCACGTAT
ATGTGATCTGGAGTGTCAAGGCATTCTTGAATGCCGAGTCTCGACATCCC
CGGGGAATTCCTCCGACATGCTGTTCTAGATACAGTTGTCCCGCATGCTT
CAGATGCCGACCTAGAGGCGGCTCTGACGTCGGCTCTAGAAAAAGGCGCA
GAGGACCTCACTTCTGTGTTGTCGCTCATACCGCAGCGTTCTCTCCTGTT
CTTCGTCCCCTTTTGCCTGGCACCTGTTTTTCTACGGAACTGAAATTGCT
TCCATTGGCGGTGGGGGCACTTCGTCTGGAAGCTGTACGTCTGGTGGATG
TAAATACGAACGAGACGATTGATATTAAAGATCTCCCGGACATCCATTCC
TTTGAAAGGAAAGGTCGACCGATTGAGGTGGTCAGTTGAAGCGCCCTCGC
ATACGCATTCAACACCCTTCCCTCCTCTTCATCGCCTCTGCTAGCCTCAA
CCCAGCTGAAACCCGACAGCAAGAGCCTCGGGGAGACGACTACCTCCCGC
CCCTGATCCCCGCGTCAACAAACATTCTACAGCCGCTGTCGAGTGATAAG
TCCTTGGATCAGAAAGATCCATTCCTCCCCGCATCTAGGCTCCTGCGAGT
TGTACCGGCGAAATACAGTGAAGACCCCATATATAATGTCCAGCAACATT
CCGGCCACCCCATACGCATAGTGCCTGCTGCCAGTGCAAGGATACGTTAT
TCTCGGCTGAATGCCTATAGTGGACGGCCTACCACTGTTGCAAGCCTTGA
TTTTGAGGTGACACCATTCCTTAATTGCGATGTCACATTTGACAAGGCAG
AGCTTAGCATGTCGGATGGGACGATAGAAACCCTTACAGATGCACCAGGA
CTGCTGCCGCCCATCCGTTGCCAGCCGCGAGATGATATCACCCTTGTATA
CAAGTTAACGCCCGACTATGCGCCGGACCCAAATCCATCGACAACTGTGA
TGGTCAGTGTACTGGATATCTCGCTAGAAGCAATAATCCACCTGTCGGAC
AATTGTAACCCGCGGATATTGATGCAATGGAGAACCAACGTTGATTTCTC
CATGGTCCTCAACCCAACTTTTGGTGGACCTAGCCAGGCTCTACAACGAA
ACAACCGCCCCGCGAGTCTTCCAATGACACCTAACCAAAGCAACGCCGCA
GCGGGGACCGCTACACCTAATCGAAGCTCTCTGAGAGAGCGGGCATACTC
AACAGCAGGCCTTGGTGTATCCGTTTCGTTCAGTGGCCCTCCACATGTCG
AAGTAGGAAAACCCTTTGCTTGGAGTATCTTCATCGTGAACCGATCTTCC
GGTTCCCGCAAATTCTCAATAGTTGCAATCCCTCGCCGGAAGAAGCTGGA
CCCACGGGGGCATACCGTGCGACCCTCTTCTTCATCTGCGACGAGCCGGA
AAGATGCTCAGGTCGCAGAAGCTGTAACCGATGATAACATTGTCCATGCA
CTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGAACTCGTTTCTCTAAGTAC
CGACGTTCGGGCTGGATGAGTTCTGCACCGTTCGCGTTGTCTTACGACTA
TCCAATTGCTCTCCACCTAGCCTGAAACAGTATCTTCCGCACCTCGAAGT
CCGACTCGATGCCTTTGCCATTGATCCCGCCGAGACAGTCGCGGAGAACC
CGACCCCGACTCGGGACCTTATATTTTCAGGGGTTGTAGATTCACAGGAG
CCATTGGTGGTGGTCAATGAGTTTGAGGGAGACACAGGTGGGGGCAACCA
CGTATATGTGATCTGGAGTGTCAAGGCATTCTTGAATGCCGAGTCTCGAC
ATCCCCGGGGAATTCCTCCGACATGCTGTTCTAGATACAGTTGTCCCGCA
TGCTTCAGATGCCGACCTAGAGGCGGCTCTGACGTCGGCTCTAGAAAAAG
GCGCAGAGGACCTCACTTCTGTGTTGTCGCTCATACCGCAGCGTTCTCTC
CTGTTCTTCGTCCCCTTTTGCCTGGCACCTGTTTTTCTACGGAACTGAAA
TTGCTTCCATTGGCGGTGGGGGCACTTCGTCTGGAAGCTGTACGTCTGGT
GGATGTAAATACGAACGAGACGATTGATATTAAAGATCTCCCGGACATCC
ATTCCTTTGAAAGGAAAGGTCGACCGATTGAGGTGGTCAGTTGAAGCGCC
CTCGCATACGCATTCAACACCCTTCCCTCCTCTTCATCGCCTCTGCTAGC
CTCAACCCAGCTGAAACCCGACAGCAAGAGCCTCGGGGAGACGACTACCT
CCCGCCCCTGATCCCCGCGTCAACAAACATTCTACAGCCGCTGTCGAGTG
ATAAGTCCTTGGATCAGAAAGATCCATTCCTCCCCGCATCTAGGCTCCTG
CGAGTTGTACCGGCGAAATACAGTGAAGACCCCATATATAATGTCCAGCA
ACATTCCGGCCACCCCATACGCATAGTGCCTGCTGCCAGTGCAAGGATAC
GTTATTCTCGGCTGAATGCCTATAGTGGACGGCCTACCACTGTTGCAAGC
CTTGATTTTGAGGTGACACCATTCCTTAATTGCGATGTCACATTTGACAA
GGCAGAGCTTAGCATGTCGGATGGGACGATAGAAACCCTTACAGATGCAC
CAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCGAGATGATATCACCCTT
GTATACAAGTTAACGCCCGACTATGCGCCGGACCCAAATCCATCGACAAC
TGTGATGGTCAGTGTACTGGATATCTCGCTAGAAGCAATAATCCACCTGT
CGGACAATTGTAACCCGCGGATATTGATGCAATGGAGAACCAACGTTGAT
TTCTCCATGGTCCTCAACCCAACTTTTGGTGGACCTAGCCAGGCTCTACA
ACGAAACAACCGCCCCGCGAGTCTTCCAATGACACCTAACCAAAGCAACG
CCGCAGCGGGGACCGCTACACCTAATCGAAGCTCTCTGAGAGAGCGGGCA
TACTCAACAGCAGGCCTTGGTGTATCCGTTTCGTTCAGTGGCCCTCCACA
TGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATCTTCATCGTGAACCGAT
CTTCCGGTTCCCGCAAATTCTCAATAGTTGCAATCCCTCGCCGGAAGAAG
CTGGACCCACGGGGGCATACCGTGCGACCCTCTTCTTCATCTGCGACGAG
CCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACCGATGATAACATTGTCC
ATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGAACTCGTTTCTCTA
AGTACCGACGTTCGGGCTGGATGAGTTCTGCACCGTTCGCGTTGTCTTAC
GACTATCCAATTGCTCTCCACCTAGCCTGAAACAGTATCTTCCGCACCTC
GAAGTCCGACTCGATGCCTTTGCCATTGATCCCGCCGAGACAGTCGCGGA
GAACCCGACCCCGACTCGGGACCTTATATTTTCAGGGGTTGTAGATTCAC
AGGAGCCATTGGTGGTGGTCAATGAGTTTGAGGGAGACACAGGTGGGGGC
AACCACGTATATGTGATCTGGAGTGTCAAGGCATTCTTGAATGCCGAGTC
TCGACATCCCCGGGGAATTCCTCCGACATGCTGTTCTAGATACAGTTGTC
CCGCATGCTTCAGATGCCGACCTAGAGGCGGCTCTGACGTCGGCTCTAGA
AAAAGGCGCAGAGGACCTCACTTCTGTGTTGTCGCTCATACCGCAGCGTT
CTCTCCTGTTCTTCGTCCCCTTTTGCCTGGCACCTGTTTTTCTACGGAAC
TGAAATTGCTTCCATTGGCGGTGGGGGCACTTCGTCTGGAAGCTGTACGT
CTGGTGGATGTAAATACGAACGAGACGATTGATATTAAAGATCTCCCGGA
CATCCATTCCTTTGAAAGGAAAGGTCGACCGATTGAGGTGGTCAGTTGAA
GCGCCCTCGCATACGCATTCAACACCCTTCCCTCCTCTTCATCGCCTCTG
CTAGCCTCAACCCAGCTGAAACCCGACAGCAAGAGCCTCGGGGAGACGAC
TACCTCCCGCCCCTGATCCCCGCGTCAACAAACATTCTACAGCCGCTGTC
GAGTGATAAGTCCTTGGATCAGAAAGATCCATTCCTCCCCGCATCTAGGC
TCCTGCGAGTTGTACCGGCGAAATACAGTGAAGACCCCATATATAATGTC
CAGCAACATTCCGGCCACCCCATACGCATAGTGCCTGCTGCCAGTGCAAG
GATACGTTATTCTCGGCTGAATGCCTATAGTGGACGGCCTACCACTGTTG
CAAGCCTTGATTTTGAGGTGACACCATTCCTTAATTGCGATGTCACATTT
GACAAGGCAGAGCTTAGCATGTCGGATGGGACGATAGAAACCCTTACAGA
TGCACCAGGACTGCTGCCGCCCATCCGTTGCCAGCCGCGAGATGATATCA
CCCTTGTATACAAGTTAACGCCCGACTATGCGCCGGACCCAAATCCATCG
ACAACTGTGATGGTCAGTGTACTGGATATCTCGCTAGAAGCAATAATCCA
CCTGTCGGACAATTGTAACCCGCGGATATTGATGCAATGGAGAACCAACG
TTGATTTCTCCATGGTCCTCAACCCAACTTTTGGTGGACCTAGCCAGGCT
CTACAACGAAACAACCGCCCCGCGAGTCTTCCAATGACACCTAACCAAAG
CAACGCCGCAGCGGGGACCGCTACACCTAATCGAAGCTCTCTGAGAGAGC
GGGCATACTCAACAGCAGGCCTTGGTGTATCCGTTTCGTTCAGTGGCCCT
CCACATGTCGAAGTAGGAAAACCCTTTGCTTGGAGTATCTTCATCGTGAA
CCGATCTTCCGGTTCCCGCAAATTCTCAATAGTTGCAATCCCTCGCCGGA
AGAAGCTGGACCCACGGGGGCATACCGTGCGACCCTCTTCTTCATCTGCG
ACGAGCCGGAAAGATGCTCAGGTCGCAGAAGCTGTAACCGATGATAACAT
TGTCCATGCACTCCAGAAGAGTGTAGTTGGCCAGGAAGCAGAACTCGTTT
CTCTAAGTACCGACGTTCGGGCTGGATGAGTTCTGCACCGTTCGCGTTGT
CTTACGACTATCCAATTGCTCTCCACCTAGCCTGAAACAGTATCTTCCGC
ACCTCGAAGTCCGACTCGATGCCTTTGCCATTGATCCCGCCGAGACAGTC
GCGGAGAACCCGACCCCGACTCGGGACCTTATATTTTCAGGGGTTGTAGA
TTCACAGGAGCCATTGGTGGTGGTCAATGAGTTTGAGGGAGACACAGGTG
GGGGCAACCACGTATATGTGATCTGGAGTGTCAAGGCATTCTTGAATGCC
GAGTCTCGACATCCCCGGGGAATTCCTCCGACATGCTGTTCTAGATACAG
TTGTCCCGCATGCTTCAGATGCCGACCTAGAGGCGGCTCTGACGTCGGCT
CTAGAAAAAGGCGCAGAGGACCTCACTTCTGTGTTGTCGCTCATACCGCA
GCGTTCTCTCCTGTTCTTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:1990071 | TRAPPII protein complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006891 | intra-Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_104580-T1 | ATCC64974_104580-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.10 |
| DBxref | InterPro:IPR024662 |
| DBxref | PFAM:PF12735 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:2810688..2812609 - |
|
