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ATCC64974_105750-T1, ATCC64974_105750-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105750-T1
Unique NameATCC64974_105750-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3136023..3137216-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105750-T1 ID=ATCC64974_105750-T1|Name=ATCC64974_105750-T1|organism=Aspergillus niger N402|type=mRNA|length=1194bp|location=Sequence derived from alignment at OGUI01000017.1:3136023..3137216- (Aspergillus niger N402)
ATGGCTGAAGCTGATTCCTTCCTTCACCTCGCTCGCCCTCTGGGCCCCGT
GGCAGTGGGGACTGCACCGACAACCGCCCCTCTGAACGTTGTCATCCAAC
CTCAGGTACGTGTTTTATGGCTGGATCAGGCAGCCCTCTTCGACCGGAGC
CAGAATGCTAATACTATGGGCTAGGCGCTCTTCTCGATCCTGGACCACTC
CCTTCGTCGCAACGCTGACCAGGAGCGTGTCATCGGTACTCTGCTGGGAA
CCAGATCCGAGGATGGAACCGAGGTGGAAATCCGCAGCACTTTCGCTGTT
GGACACACGGAGACGACAGACCAGGTTGAGGTGGACATGGAATACCAGAA
GCAGATGCTTGCGTTGCACCTGAAGGCCAACCCCAAGGAAGTGCTCGTGG
GTTGGTACGCCACCTCGTCCGAGCTGAACACCTTTTCCGCTTTGATCCAG
AACTTCTACAGCGGCCAGGGTGATGGCACATGGCCTCACCCTGCCGTCCA
CTTGACCGTGTCCACCGAGGCTGGCAAGGATATCGAGACCCGCGCCTACA
TCTCCGCCCCCGTTGGTGTGACCGCGGAGAGAGCCGCCGACAGCGCCGCC
TTCATCCCCGTCCCTTACGAGATCCGCTACGGCGAGGCCGAGAAGAGTGG
TCTGGAGGCTATTGCTGCGGCCCGTGATGCCGAGGAGCGCCGTGCCAACA
TCTTCACTGATATCGAGGCTCTGGAGCGTGCGATTGAGGATGTTCTGGGC
ATGATCGACCGGGTTTCCCGCTACGTTGAGTCTGTCATTGACGAGGAGGC
TCCTGCTTCGACGGCCTTGGGCCAGTACCTGCTCAACACCTTGGCTCTGG
CGCCTAAGGTTGAGCCTGCTGACATTGAGCGTGACTTGTATGTTGCCCCC
CTCCCCTCTTCTTCCCTTACCCCCCTAGTTATCAGCCCAATATCAAGTAC
CAAACTAACCGAAATCAACAGCAACAACCACATCCAGGACGTCCTGGTCG
TGTCCTACCTGGCCAACACCATCCGTACACAGATGGAGCTGTCCAACCGG
CTAGCAACCGCCCAGCTGACTCTGGGAGGCGAGTCCGGCAGCGGCGAGTC
GGGCGACAAGCGCGGCGGCCAACGGGGCGGCAAAGGAGGCCGGGGCGGGC
AACAGCGGACTCAAGAACGGGGCGGAGAGGAGGCTCGCGCGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3136023..3137216-

>ATCC64974_105750-T1 ID=ATCC64974_105750-T1|Name=ATCC64974_105750-T1|organism=Aspergillus niger N402|type=CDS|length=3123bp|location=Sequence derived from alignment at OGUI01000017.1:3136023..3137216- (Aspergillus niger N402)
CAACAACCACATCCAGGACGTCCTGGTCGTGTCCTACCTGGCCAACACCA
TCCGTACACAGATGGAGCTGTCCAACCGGCTAGCAACCGCCCAGCTGACT
CTGGGAGGCGAGTCCGGCAGCGGCGAGTCGGGCGACAAGCGCGGCGGCCA
ACGGGGCGGCAAAGGAGGCCGGGGCGGGCAACAGCGGACTCAAGAACGGG
GCGGAGAGGAGGCTCGCGCGTAAGCGCTCTTCTCGATCCTGGACCACTCC
CTTCGTCGCAACGCTGACCAGGAGCGTGTCATCGGTACTCTGCTGGGAAC
CAGATCCGAGGATGGAACCGAGGTGGAAATCCGCAGCACTTTCGCTGTTG
GACACACGGAGACGACAGACCAGGTTGAGGTGGACATGGAATACCAGAAG
CAGATGCTTGCGTTGCACCTGAAGGCCAACCCCAAGGAAGTGCTCGTGGG
TTGGTACGCCACCTCGTCCGAGCTGAACACCTTTTCCGCTTTGATCCAGA
ACTTCTACAGCGGCCAGGGTGATGGCACATGGCCTCACCCTGCCGTCCAC
TTGACCGTGTCCACCGAGGCTGGCAAGGATATCGAGACCCGCGCCTACAT
CTCCGCCCCCGTTGGTGTGACCGCGGAGAGAGCCGCCGACAGCGCCGCCT
TCATCCCCGTCCCTTACGAGATCCGCTACGGCGAGGCCGAGAAGAGTGGT
CTGGAGGCTATTGCTGCGGCCCGTGATGCCGAGGAGCGCCGTGCCAACAT
CTTCACTGATATCGAGGCTCTGGAGCGTGCGATTGAGGATGTTCTGGGCA
TGATCGACCGGGTTTCCCGCTACGTTGAGTCTGTCATTGACGAGGAGGCT
CCTGCTTCGACGGCCTTGGGCCAGTACCTGCTCAACACCTTGGCTCTGGC
GCCTAAGGTTGAGCCTGCTGACATTGAGCGTGACTTATGGCTGAAGCTGA
TTCCTTCCTTCACCTCGCTCGCCCTCTGGGCCCCGTGGCAGTGGGGACTG
CACCGACAACCGCCCCTCTGAACGTTGTCATCCAACCTCAGCAACAACCA
CATCCAGGACGTCCTGGTCGTGTCCTACCTGGCCAACACCATCCGTACAC
AGATGGAGCTGTCCAACCGGCTAGCAACCGCCCAGCTGACTCTGGGAGGC
GAGTCCGGCAGCGGCGAGTCGGGCGACAAGCGCGGCGGCCAACGGGGCGG
CAAAGGAGGCCGGGGCGGGCAACAGCGGACTCAAGAACGGGGCGGAGAGG
AGGCTCGCGCGTAAGCGCTCTTCTCGATCCTGGACCACTCCCTTCGTCGC
AACGCTGACCAGGAGCGTGTCATCGGTACTCTGCTGGGAACCAGATCCGA
GGATGGAACCGAGGTGGAAATCCGCAGCACTTTCGCTGTTGGACACACGG
AGACGACAGACCAGGTTGAGGTGGACATGGAATACCAGAAGCAGATGCTT
GCGTTGCACCTGAAGGCCAACCCCAAGGAAGTGCTCGTGGGTTGGTACGC
CACCTCGTCCGAGCTGAACACCTTTTCCGCTTTGATCCAGAACTTCTACA
GCGGCCAGGGTGATGGCACATGGCCTCACCCTGCCGTCCACTTGACCGTG
TCCACCGAGGCTGGCAAGGATATCGAGACCCGCGCCTACATCTCCGCCCC
CGTTGGTGTGACCGCGGAGAGAGCCGCCGACAGCGCCGCCTTCATCCCCG
TCCCTTACGAGATCCGCTACGGCGAGGCCGAGAAGAGTGGTCTGGAGGCT
ATTGCTGCGGCCCGTGATGCCGAGGAGCGCCGTGCCAACATCTTCACTGA
TATCGAGGCTCTGGAGCGTGCGATTGAGGATGTTCTGGGCATGATCGACC
GGGTTTCCCGCTACGTTGAGTCTGTCATTGACGAGGAGGCTCCTGCTTCG
ACGGCCTTGGGCCAGTACCTGCTCAACACCTTGGCTCTGGCGCCTAAGGT
TGAGCCTGCTGACATTGAGCGTGACTTATGGCTGAAGCTGATTCCTTCCT
TCACCTCGCTCGCCCTCTGGGCCCCGTGGCAGTGGGGACTGCACCGACAA
CCGCCCCTCTGAACGTTGTCATCCAACCTCAGCAACAACCACATCCAGGA
CGTCCTGGTCGTGTCCTACCTGGCCAACACCATCCGTACACAGATGGAGC
TGTCCAACCGGCTAGCAACCGCCCAGCTGACTCTGGGAGGCGAGTCCGGC
AGCGGCGAGTCGGGCGACAAGCGCGGCGGCCAACGGGGCGGCAAAGGAGG
CCGGGGCGGGCAACAGCGGACTCAAGAACGGGGCGGAGAGGAGGCTCGCG
CGTAAGCGCTCTTCTCGATCCTGGACCACTCCCTTCGTCGCAACGCTGAC
CAGGAGCGTGTCATCGGTACTCTGCTGGGAACCAGATCCGAGGATGGAAC
CGAGGTGGAAATCCGCAGCACTTTCGCTGTTGGACACACGGAGACGACAG
ACCAGGTTGAGGTGGACATGGAATACCAGAAGCAGATGCTTGCGTTGCAC
CTGAAGGCCAACCCCAAGGAAGTGCTCGTGGGTTGGTACGCCACCTCGTC
CGAGCTGAACACCTTTTCCGCTTTGATCCAGAACTTCTACAGCGGCCAGG
GTGATGGCACATGGCCTCACCCTGCCGTCCACTTGACCGTGTCCACCGAG
GCTGGCAAGGATATCGAGACCCGCGCCTACATCTCCGCCCCCGTTGGTGT
GACCGCGGAGAGAGCCGCCGACAGCGCCGCCTTCATCCCCGTCCCTTACG
AGATCCGCTACGGCGAGGCCGAGAAGAGTGGTCTGGAGGCTATTGCTGCG
GCCCGTGATGCCGAGGAGCGCCGTGCCAACATCTTCACTGATATCGAGGC
TCTGGAGCGTGCGATTGAGGATGTTCTGGGCATGATCGACCGGGTTTCCC
GCTACGTTGAGTCTGTCATTGACGAGGAGGCTCCTGCTTCGACGGCCTTG
GGCCAGTACCTGCTCAACACCTTGGCTCTGGCGCCTAAGGTTGAGCCTGC
TGACATTGAGCGTGACTTATGGCTGAAGCTGATTCCTTCCTTCACCTCGC
TCGCCCTCTGGGCCCCGTGGCAGTGGGGACTGCACCGACAACCGCCCCTC
TGAACGTTGTCATCCAACCTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0031369translation initiation factor binding
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_105750ATCC64974_105750Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105750-T1ATCC64974_105750-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105750-T1.cdsATCC64974_105750-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105750-T1.exon3ATCC64974_105750-T1.exon3Aspergillus niger N402exon
ATCC64974_105750-T1.exon2ATCC64974_105750-T1.exon2Aspergillus niger N402exon
ATCC64974_105750-T1.exon1ATCC64974_105750-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteMEROPS:MER0030133
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR027531
DBxrefInterPro:IPR024969
DBxrefInterPro:IPR000555
DBxrefPFAM:PF13012
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3136023..3137216 -
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