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ATCC64974_106550-T1, ATCC64974_106550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_106550-T1
Unique NameATCC64974_106550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3440127..3441033+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_106550-T1 ID=ATCC64974_106550-T1|Name=ATCC64974_106550-T1|organism=Aspergillus niger N402|type=mRNA|length=907bp|location=Sequence derived from alignment at OGUI01000017.1:3440127..3441033+ (Aspergillus niger N402)
ATGAATCACTTTCCCGAAGCTTGGGGTCGCGTAAGAGCATCATCATCATC
GCATTAGATTATTTATGTCGCTAACAAGTTGCTGAAAGCCTAGGGATGAC
GTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGGTCCGAAAAC
CCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGGCAGTCAAGT
TTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGGTATAGCTGGGAAT
TAGATTGGAAATCCATTTCGCACTTTCACTGACGGATATTCTTTTTTTAT
AGCATCATACGGGTCTCTTGCCCGCTTCACTGATGTGAAACGTCTTCGCA
AGTTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTTTCGGATATG
CAGTATATCGACCGACTACTGGAGTCCATCGATATCAGAGAAAATTACTC
TACCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTTATTTGTCGA
AAGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGGAACCACATC
TTGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAGTTCTGCGGA
TCTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCGGCTTTGGTG
CCCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAGGAAAGGCCT
CTCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAGGGAATGTAT
CAAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGTACTCCTTAG
CTGTTATTACTGAGGAGGGAGTTGAGATTCAGGAGGACCAGCAGGTTGAA
GCCCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGATATGGGGCTCAGGT
TAACTAG
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Coding sequence (CDS) from alignment at OGUI01000017.1:3440127..3441033+

>ATCC64974_106550-T1 ID=ATCC64974_106550-T1|Name=ATCC64974_106550-T1|organism=Aspergillus niger N402|type=CDS|length=2349bp|location=Sequence derived from alignment at OGUI01000017.1:3440127..3441033+ (Aspergillus niger N402)
ATGAATCACTTTCCCGAAGCTTGGGGTCGCCCTAGGGATGACGTTTACGG
ACCCTACAACGCCTCATACCTCCAGACAACTGGTCCGAAAACCCACACTC
AGTCACCTGCTGTGACTGGTACGTCGGTAGTGGCAGTCAAGTTTAACGGC
GGAGTTGCAATTGCTGCCGATAACCTAGCATCATACGGGTCTCTTGCCCG
CTTCACTGATGTGAAACGTCTTCGCAAGTTTGGCGATTCTGCCATCATCG
GATTCAGTGGTGACGTTTCGGATATGCAGTATATCGACCGACTACTGGAG
TCCATCGATATCAGAGAAAATTACTCTACCCACGGAAACACGTTGAACGC
CAAGAACCTTCATACTTATTTGTCGAAAGTTTTCTACAAGCGCCGTTCTG
AGTTCAACCCCCTCTGGAACCACATCTTGGTGGCCGGGTTTGATGGAGAC
AAGAAGCCATTCCTCAGTTCTGCGGATCTGCTGGGGACCACCTTCTCAGC
TCCTCATCTCGCGACCGGCTTTGGTGCCCATCTTGCCGTTCCAATCCTTC
GCCGGCTGTTCCCAGAGGAAAGGCCTCTCGAGTCAATCACCAAGGATGAG
GCCGTGGCGGCGCTAAGGGAATGTATCAAGGTTCTCTGGTACCGTGATGC
GCGGAGTCTGGACAAGTACTCCTTAGCTGTTATTACTGAGGAGGGAGTTG
AGATTCAGGAGGACCAGCAGGTTGAAGCCCAGAGCTGGGCATTCGCCGAA
GCCATCAAGGGATATGGGGCTCAGGTTAACTAGATGAATCACTTTCCCGA
AGCTTGGGGTCGCCCTAGGGATGACGTTTACGGACCCTACAACGCCTCAT
ACCTCCAGACAACTGGTCCGAAAACCCACACTCAGTCACCTGCTGTGACT
GGTACGTCGGTAGTGGCAGTCAAGTTTAACGGCGGAGTTGCAATTGCTGC
CGATAACCTAGCATCATACGGGTCTCTTGCCCGCTTCACTGATGTGAAAC
GTCTTCGCAAGTTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTT
TCGGATATGCAGTATATCGACCGACTACTGGAGTCCATCGATATCAGAGA
AAATTACTCTACCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTT
ATTTGTCGAAAGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGG
AACCACATCTTGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAG
TTCTGCGGATCTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCG
GCTTTGGTGCCCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAG
GAAAGGCCTCTCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAG
GGAATGTATCAAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGT
ACTCCTTAGCTGTTATTACTGAGGAGGGAGTTGAGATTCAGGAGGACCAG
CAGGTTGAAGCCCAGAGCTGGGCATTCGCCGAAGCCATCAAGGGATATGG
GGCTCAGGTTAACTAGATGAATCACTTTCCCGAAGCTTGGGGTCGCCCTA
GGGATGACGTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGGT
CCGAAAACCCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGGC
AGTCAAGTTTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGCATCAT
ACGGGTCTCTTGCCCGCTTCACTGATGTGAAACGTCTTCGCAAGTTTGGC
GATTCTGCCATCATCGGATTCAGTGGTGACGTTTCGGATATGCAGTATAT
CGACCGACTACTGGAGTCCATCGATATCAGAGAAAATTACTCTACCCACG
GAAACACGTTGAACGCCAAGAACCTTCATACTTATTTGTCGAAAGTTTTC
TACAAGCGCCGTTCTGAGTTCAACCCCCTCTGGAACCACATCTTGGTGGC
CGGGTTTGATGGAGACAAGAAGCCATTCCTCAGTTCTGCGGATCTGCTGG
GGACCACCTTCTCAGCTCCTCATCTCGCGACCGGCTTTGGTGCCCATCTT
GCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTCTCGAGTC
AATCACCAAGGATGAGGCCGTGGCGGCGCTAAGGGAATGTATCAAGGTTC
TCTGGTACCGTGATGCGCGGAGTCTGGACAAGTACTCCTTAGCTGTTATT
ACTGAGGAGGGAGTTGAGATTCAGGAGGACCAGCAGGTTGAAGCCCAGAG
CTGGGCATTCGCCGAAGCCATCAAGGGATATGGGGCTCAGGTTAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_106550ATCC64974_106550Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106550-T1.exon1ATCC64974_106550-T1.exon1Aspergillus niger N402exon
ATCC64974_106550-T1.exon2ATCC64974_106550-T1.exon2Aspergillus niger N402exon
ATCC64974_106550-T1.exon3ATCC64974_106550-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106550-T1.cdsATCC64974_106550-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_106550-T1ATCC64974_106550-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263XZN
NoteMEROPS:MER0001711
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR016050
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR016295
DBxrefPFAM:PF00227
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3440127..3441033 +
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