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ATCC64974_107640-T1, ATCC64974_107640-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107640-T1
Unique NameATCC64974_107640-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3777339..3778883-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107640-T1 ID=ATCC64974_107640-T1|Name=ATCC64974_107640-T1|organism=Aspergillus niger N402|type=mRNA|length=1545bp|location=Sequence derived from alignment at OGUI01000017.1:3777339..3778883- (Aspergillus niger N402)
ATGTCGACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAA
GAAGAAGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAG
GAGATGCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGA
CTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCG
ACGGCGGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGC
GCCTGACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAA
GAAAAGATCGAGAACAACAGGTAAGCTCCGGTTGTCTTCCGTTCCGCCAG
CGCCTGTTCGACGCGGTGGCAATTGCGGCGTAAGCCGGGTCTTTTACTGA
CTGTCCGTCTGCTAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGC
TTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATT
GACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGAC
CCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGC
TGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTG
GATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGA
TGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAA
TCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGG
TTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTATGTAATCGTGGATTTC
CCAGCCTAGCACGGGTCTTCTGACACACTTTCACAGGTGCTCTAATGTAT
GGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGA
GACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGT
TCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAG
GAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTAC
GAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCA
TGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATC
AAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCT
CCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGG
AGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGAT
GACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGG
TGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGA
AGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAA
GTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3777339..3778883-

>ATCC64974_107640-T1 ID=ATCC64974_107640-T1|Name=ATCC64974_107640-T1|organism=Aspergillus niger N402|type=CDS|length=4185bp|location=Sequence derived from alignment at OGUI01000017.1:3777339..3778883- (Aspergillus niger N402)
GTGCTCTAATGTATGGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGA
GCCTGTGCAGCAGAGACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCA
GTTGGTGCAGATGTTCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCT
TCGCCCTTGCCAAGGAGAAGGCACCTTCCATCATCTTCATCGACGAGCTG
GATGCGGTCGGTACGAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGA
AGTGCAGCGAACCATGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCT
CGGACGATCGCATCAAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTC
GATCCCGCCCTGCTCCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCC
GCTACCCAACGAGGAGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCA
AAATGGCTGTGGATGACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACC
GACGAGTTTGGTGGTGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTAT
GATTGCTCTCCGGAAGGGCATGAGCAAGGTAGGACACGAGAACTACGTGG
ATGCCATTTCGGAAGTACAGGCAAAGAAGAAGGACACGAACATGGGTATC
TATGTCTAAGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTGG
ATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCTT
GATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCCA
GACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAGC
CTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATACG
CTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGAA
GCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAGG
AAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAAG
AAGCTTGGCATTAAGGCACCGAAAGATGTCGACCTTGGAAGACCTCGACG
ACCTTGAGCGTGAGCAGAGAGACAAGAAGAAGGACCAAGGAGATGACGGT
GACGGCAGGAAGCCCGAAGGTGAAGGAGATGCTGATATGAAAGATGCCGA
TGCCAAGAGAGATGAGGATGATGGACTCTTGGACGAGGAGATCCTTAGCT
CGAGCACAGCGGACATCGTCAAGCGACGGCGGATGCTGGAGAACGAGCTG
CGTATAATGAAGAGCGAATACCAGCGCCTGACTCACGAGCAAAACACGAT
GCGAGAGAAAGTCAAGGATAACCAAGAAAAGATCGAGAACAACAGGTGCT
CTAATGTATGGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTG
TGCAGCAGAGACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGG
TGCAGATGTTCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCC
CTTGCCAAGGAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGC
GGTCGGTACGAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGC
AGCGAACCATGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGAC
GATCGCATCAAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCC
CGCCCTGCTCCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTAC
CCAACGAGGAGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATG
GCTGTGGATGACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGA
GTTTGGTGGTGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTG
CTCTCCGGAAGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCC
ATTTCGGAAGTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGT
CTAAGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTGGATTTG
GATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCTTGATGC
TACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCCAGACTA
TCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAGCCTGGT
GATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATACGCTACC
TGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGAAGCCGA
CGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAGGAAATT
GTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAAGAAGCT
TGGCATTAAGGCACCGAAAGATGTCGACCTTGGAAGACCTCGACGACCTT
GAGCGTGAGCAGAGAGACAAGAAGAAGGACCAAGGAGATGACGGTGACGG
CAGGAAGCCCGAAGGTGAAGGAGATGCTGATATGAAAGATGCCGATGCCA
AGAGAGATGAGGATGATGGACTCTTGGACGAGGAGATCCTTAGCTCGAGC
ACAGCGGACATCGTCAAGCGACGGCGGATGCTGGAGAACGAGCTGCGTAT
AATGAAGAGCGAATACCAGCGCCTGACTCACGAGCAAAACACGATGCGAG
AGAAAGTCAAGGATAACCAAGAAAAGATCGAGAACAACAGGTGCTCTAAT
GTATGGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAG
CAGAGACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAG
ATGTTCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGC
CAAGGAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCG
GTACGAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGA
ACCATGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCG
CATCAAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCC
TGCTCCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAAC
GAGGAGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGT
GGATGACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTG
GTGGTGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTC
CGGAAGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTC
GGAAGTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAAG
CAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTGGATTTGGATGT
TGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCTTGATGCTACAC
GGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCCAGACTATCTAT
CTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAGCCTGGTGATCT
GATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATACGCTACCTGCCG
AGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGAAGCCGACGGAG
AAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAGGAAATTGTGGA
GGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAAGAAGCTTGGCA
TTAAGGCACCGAAAGATGTCGACCTTGGAAGACCTCGACGACCTTGAGCG
TGAGCAGAGAGACAAGAAGAAGGACCAAGGAGATGACGGTGACGGCAGGA
AGCCCGAAGGTGAAGGAGATGCTGATATGAAAGATGCCGATGCCAAGAGA
GATGAGGATGATGGACTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGC
GGACATCGTCAAGCGACGGCGGATGCTGGAGAACGAGCTGCGTATAATGA
AGAGCGAATACCAGCGCCTGACTCACGAGCAAAACACGATGCGAGAGAAA
GTCAAGGATAACCAAGAAAAGATCGAGAACAACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT5ATCC64974_107640Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107640-T1ATCC64974_107640-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107640-T1.cdsATCC64974_107640-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107640-T1.exon3ATCC64974_107640-T1.exon3Aspergillus niger N402exon
ATCC64974_107640-T1.exon2ATCC64974_107640-T1.exon2Aspergillus niger N402exon
ATCC64974_107640-T1.exon1ATCC64974_107640-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF00004
Product26S proteasome regulatory subunit 6A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3777339..3778883 -
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