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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3804686..3806024+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_107780-T1 ID=ATCC64974_107780-T1|Name=ATCC64974_107780-T1|organism=Aspergillus niger N402|type=mRNA|length=1339bp|location=Sequence derived from alignment at OGUI01000017.1:3804686..3806024+ (Aspergillus niger N402)
ATGGCACCCTCTTCGACGACCGCTGGGCGGATAGACGAAGCCCGGGGTCT
CGTGAAGAGCGACCCTTCCAAGGCCGAGAGCATCCTCAAGGAAATCCTTG
CGCAAGGTACCGGCTCGTCTGAGGCCTCATCGCGCGATTACGAGAATGCC
CTGGTGTTGCTGGGAGAGCTCTACCGGGACCAGAAGAAGCCCCACGAGAT
TGCCGAACTCATCAAGACCAGCCGCGATTCCTTCTCTTCATTTGCCAAGG
CAAAGACAGCTAAGCTGGGTATGTAGCATTGACAGAGATGATGTTTTGCT
TCCAGGGTTACTGACCACCCGTCCTCTGATAGTCCGCCAGCTGTTGGACC
TGTTCAGCGAGATCCCGAACACACTCGATATCCAAGTTTCCGTCATCCAA
TCATGCATTGAATGGGCCATCGCCGAGCGGAGGTCCTTCCTTCGTCAGAA
CCTCCAGACTCGCCTTGTAGCTATCTACATGCAGAAACAGACCTACTACG
ATGCGCTCACCCTCATCAACTCCCTCCTCCGCGAGCTAAAGCGCCTGGAT
GACAAGCTCATGCTGGTTGAGGTGCAGCTGCTGGAGTCGCGGGTGTACCA
TGCATTGGGCAACCAGGCCAAGGCACGTGCTGCCTTGACGGCAGCCCGGA
CATCGGCCGCTTCCGTTTACACGCCGCCGAACCTGCAGGCCGGTCTCGAC
ATGCAGAGTGGTATGCTACACGCAGAGGACAAGGATTTCAACACGTCATT
CTCCTATTTCATTGAGGCTCTGGAAGGGTACAGCTCCCTCGATGAGGGAG
AAAAGGCCACTGCGGCCCTCCAATATATGCTGCTGTGCAAGATCATGTTG
AACCTGGTGGATGATGTGACAAATTTGCTGGGATCGAAGCAGGCTCAGAA
GTATGCCAGCCCGCGACTCGAGGCCATGAAGGCTGTGGCGCGTGCACATG
CCAACCGGTCCCTGGAGGAGTACGAAAAGGCGCTCTCGGACTACCGGTTC
GAGCTGGGCAGTGATACATTCATCCGCAACCACCTCCGCAGATTGTACGA
TGCCATGTTGGAGCAGAACCTGATCAAGGTTATTGAACCTTTCAGCCGGG
TCGAGCTGGACCACATTGCTAAGATGGTTGGGCTGGACACGCAGCAGGTG
GAGCGGAAGCTCTCCCAGATGATCCTGGACAAGGTGATTATTGGAGTGCT
CGACCAGGGGGCTGGATGCCTGATTGTCTACGATGAGACGGAGCGGGACC
AGGCATACGATGCTGCGTTGGACACGATCGAGAAGCTGAGCAATGTGGTG
GAAGAGCTGTACACTAATCAAGCATCGCTGCTAGAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3804686..3806024+ >ATCC64974_107780-T1 ID=ATCC64974_107780-T1|Name=ATCC64974_107780-T1|organism=Aspergillus niger N402|type=CDS|length=2550bp|location=Sequence derived from alignment at OGUI01000017.1:3804686..3806024+ (Aspergillus niger N402)
ATGGCACCCTCTTCGACGACCGCTGGGCGGATAGACGAAGCCCGGGGTCT
CGTGAAGAGCGACCCTTCCAAGGCCGAGAGCATCCTCAAGGAAATCCTTG
CGCAAGGTACCGGCTCGTCTGAGGCCTCATCGCGCGATTACGAGAATGCC
CTGGTGTTGCTGGGAGAGCTCTACCGGGACCAGAAGAAGCCCCACGAGAT
TGCCGAACTCATCAAGACCAGCCGCGATTCCTTCTCTTCATTTGCCAAGG
CAAAGACAGCTAAGCTGGTCCGCCAGCTGTTGGACCTGTTCAGCGAGATC
CCGAACACACTCGATATCCAAGTTTCCGTCATCCAATCATGCATTGAATG
GGCCATCGCCGAGCGGAGGTCCTTCCTTCGTCAGAACCTCCAGACTCGCC
TTGTAGCTATCTACATGCAGAAACAGACCTACTACGATGCGCTCACCCTC
ATCAACTCCCTCCTCCGCGAGCTAAAGCGCCTGGATGACAAGCTCATGCT
GGTTGAGGTGCAGCTGCTGGAGTCGCGGGTGTACCATGCATTGGGCAACC
AGGCCAAGGCACGTGCTGCCTTGACGGCAGCCCGGACATCGGCCGCTTCC
GTTTACACGCCGCCGAACCTGCAGGCCGGTCTCGACATGCAGAGTGGTAT
GCTACACGCAGAGGACAAGGATTTCAACACGTCATTCTCCTATTTCATTG
AGGCTCTGGAAGGGTACAGCTCCCTCGATGAGGGAGAAAAGGCCACTGCG
GCCCTCCAATATATGCTGCTGTGCAAGATCATGTTGAACCTGGTGGATGA
TGTGACAAATTTGCTGGGATCGAAGCAGGCTCAGAAGTATGCCAGCCCGC
GACTCGAGGCCATGAAGGCTGTGGCGCGTGCACATGCCAACCGGTCCCTG
GAGGAGTACGAAAAGGCGCTCTCGGACTACCGGTTCGAGCTGGGCAGTGA
TACATTCATCCGCAACCACCTCCGCAGATTGTACGATGCCATGTTGGAGC
AGAACCTGATCAAGGTTATTGAACCTTTCAGCCGGGTCGAGCTGGACCAC
ATTGCTAAGATGGTTGGGCTGGACACGCAGCAGGTGGAGCGGAAGCTCTC
CCAGATGATCCTGGACAAGGTGATTATTGGAGTGCTCGACCAGGGGGCTG
GATGCCTGATTGTCTACGATGAGACGGAGCGGGACCAGGCATACGATGCT
GCGTTGGACACGATCGAGAAGCTGAGCAATGTGGTGGAAGAGCTGTACAC
TAATCAAGCATCGCTGCTAGAGTAAATGGCACCCTCTTCGACGACCGCTG
GGCGGATAGACGAAGCCCGGGGTCTCGTGAAGAGCGACCCTTCCAAGGCC
GAGAGCATCCTCAAGGAAATCCTTGCGCAAGGTACCGGCTCGTCTGAGGC
CTCATCGCGCGATTACGAGAATGCCCTGGTGTTGCTGGGAGAGCTCTACC
GGGACCAGAAGAAGCCCCACGAGATTGCCGAACTCATCAAGACCAGCCGC
GATTCCTTCTCTTCATTTGCCAAGGCAAAGACAGCTAAGCTGGTCCGCCA
GCTGTTGGACCTGTTCAGCGAGATCCCGAACACACTCGATATCCAAGTTT
CCGTCATCCAATCATGCATTGAATGGGCCATCGCCGAGCGGAGGTCCTTC
CTTCGTCAGAACCTCCAGACTCGCCTTGTAGCTATCTACATGCAGAAACA
GACCTACTACGATGCGCTCACCCTCATCAACTCCCTCCTCCGCGAGCTAA
AGCGCCTGGATGACAAGCTCATGCTGGTTGAGGTGCAGCTGCTGGAGTCG
CGGGTGTACCATGCATTGGGCAACCAGGCCAAGGCACGTGCTGCCTTGAC
GGCAGCCCGGACATCGGCCGCTTCCGTTTACACGCCGCCGAACCTGCAGG
CCGGTCTCGACATGCAGAGTGGTATGCTACACGCAGAGGACAAGGATTTC
AACACGTCATTCTCCTATTTCATTGAGGCTCTGGAAGGGTACAGCTCCCT
CGATGAGGGAGAAAAGGCCACTGCGGCCCTCCAATATATGCTGCTGTGCA
AGATCATGTTGAACCTGGTGGATGATGTGACAAATTTGCTGGGATCGAAG
CAGGCTCAGAAGTATGCCAGCCCGCGACTCGAGGCCATGAAGGCTGTGGC
GCGTGCACATGCCAACCGGTCCCTGGAGGAGTACGAAAAGGCGCTCTCGG
ACTACCGGTTCGAGCTGGGCAGTGATACATTCATCCGCAACCACCTCCGC
AGATTGTACGATGCCATGTTGGAGCAGAACCTGATCAAGGTTATTGAACC
TTTCAGCCGGGTCGAGCTGGACCACATTGCTAAGATGGTTGGGCTGGACA
CGCAGCAGGTGGAGCGGAAGCTCTCCCAGATGATCCTGGACAAGGTGATT
ATTGGAGTGCTCGACCAGGGGGCTGGATGCCTGATTGTCTACGATGAGAC
GGAGCGGGACCAGGCATACGATGCTGCGTTGGACACGATCGAGAAGCTGA
GCAATGTGGTGGAAGAGCTGTACACTAATCAAGCATCGCTGCTAGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_107780-T1 | ATCC64974_107780-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092630YS |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR040773 |
| DBxref | InterPro:IPR040780 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF18055 |
| DBxref | PFAM:PF18503 |
| DBxref | PFAM:PF01399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3804686..3806024 + |
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