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ATCC64974_107920-T1, ATCC64974_107920-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107920-T1
Unique NameATCC64974_107920-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3848891..3850332-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107920-T1 ID=ATCC64974_107920-T1|Name=ATCC64974_107920-T1|organism=Aspergillus niger N402|type=mRNA|length=1442bp|location=Sequence derived from alignment at OGUI01000017.1:3848891..3850332- (Aspergillus niger N402)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACAGTAAGACTCCCTCACTATCCATCTCGTGACTTGTGA
AACGCTGATTCGGTCCAGTTTTCCGACAACCTCACCTACTGGCGTAACAA
CTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCG
GCGACAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAAT
GGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCC
GATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCT
ACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAAC
ATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTG
GGGCGATAACTGGGTGCAGAATACGGATGGTTTCGGTATGATTCTTTTTG
TCCGCGCTCTAGTGGAATGGGTTAGGTTCTGACTAGCACTCGTATCCAGA
TACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCG
GAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAG
AATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCA
ATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATG
TACGTGATTGTTTCCCGGCCACCATCGCCATTAGTATTAACCGTAATCCA
GATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCT
GGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCT
CGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAA
TGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACA
ACGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTT
GTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGT
CTCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGG
TGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAA
TATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3848891..3850332-

>ATCC64974_107920-T1 ID=ATCC64974_107920-T1|Name=ATCC64974_107920-T1|organism=Aspergillus niger N402|type=CDS|length=5088bp|location=Sequence derived from alignment at OGUI01000017.1:3848891..3850332- (Aspergillus niger N402)
ATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCTG
GGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCTC
GTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAAT
GTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACAA
CGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTTG
TCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGTC
TCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGGT
GTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAAT
ATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGAATACCATGG
ACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCGGAGATGAC
TGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAGAATGTTAC
CTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCAATATTTGG
AAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATTTTTCCGAC
AACCTCACCTACTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCA
TCATGCCGGCTTCATTATTAGCGGCGACAACATCACCATCAATGGCTATG
GCACCGGCGGCATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAG
GGCGACACGCAGCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTC
TGAGGTTATTGTTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTG
TCAACATCATGAACGGGACTAACATGCGTTTCAACAATATCTACTGCAAC
GCCACGGCTGTAGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGA
TGGTTTCGATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTG
GCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCAC
CGTCCGAGCAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGG
CGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAA
TCGTACTGGATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAAT
CGAATGGCGGGGGAAGTGGACAATCATCCGCTACAACGAAGACATGCACA
ACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCCCAAAGTTCC
TACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAGCATCCGTAA
CGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTGGCCCTTCCA
TCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACAAGCAAGATG
TCTATTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGTGGATACTGA
GAAGTCTGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATCCGTGCTACA
ATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAATGCCACAACA
GCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGTGCATGGGTT
GAGTGGGTGTTGAATACCATGGACGCTACCAACATCCAGCTCACCAACTT
CGTCTACCAAGGCGGAGATGACTGCATCGCTATCAAGCCCCGCTCCTACA
ACATCGACATCCAGAATGTTACCTGCCGTGGAGGCAACGGCATTGCCATT
GGCAGCTTGGGTCAATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGT
GGACAAGGTCAATTTTTCCGACAACCTCACCTACTGGCGTAACAACTCCT
ACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGAC
AACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCAA
TACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATGC
CATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGTC
AAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGCG
TTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGCG
ATAACTGGGTGCAGAATACGGATGGTTTCGATGCAACTAAGAGCTTCGGT
TTTGCTCTCTTTCCTGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGG
AAAACAACCACAATGTCTGCACCGTCCGAGCAAACGGGGGACACCAAGAT
GACGTCCCCAATATTATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTAC
CATTATTTTCCCCGAAGACCAATCGTACTGGATTGCGACGAGACTGCATC
CCACATTGAAGGACGTCGCAATCGAATGGCGGGGGAAGTGGACAATCATC
CGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCTGGGTCGG
AGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTGGCG
ATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAATGTACAA
GGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACAACGGTTC
CTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTTGTCAATT
TCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGTCTCCTGC
TCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGGTGTTGTA
TCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAATATACAG
CTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGAATACCATGGACGCTA
CCAACATCCAGCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATC
GCTATCAAGCCCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCG
TGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATA
GCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATTTTTCCGACAACCTC
ACCTACTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATGC
CGGCTTCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACCG
GCGGCATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGAC
ACGCAGCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGGT
TATTGTTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAACA
TCATGAACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCACG
GCTGTAGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTTT
CGATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCC
GTTGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCG
AGCAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCA
AAGAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTAC
TGGATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATG
GCGGGGGAAGTGGACAATCATCCGCTACAACGAAGACATGCACAACAGCG
CCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAA
AGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCT
ATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTC
AGGACAGTGGAGACAACGGTTCCTATGCGGGTACAAGCAAGATGTCTATT
TCAAATGTTGCGTTTGTCAATTTCACGGGATGGGTGGATACTGAGAAGTC
TGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATCCGTGCTACAATATCG
ACTATGACAATGTGGTGTTGTATCCAGGGAAGAATGCCACAACAGCTGGG
ACAGGGTCTTGTAAATATACAGCTGATGGAGGAGTGCATGGGTTGAGTGG
GTGTTGAATACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTA
CCAAGGCGGAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCG
ACATCCAGAATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGC
TTGGGTCAATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAA
GGTCAATTTTTCCGACAACCTCACCTACTGGCGTAACAACTCCTACCCCA
TTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGACAACATC
ACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCAATACTTG
GTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATGCCATTTG
TCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGTCAAGGAT
CCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGCGTTTCAA
CAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGCGATAACT
GGGTGCAGAATACGGATGGTTTCGATGCAACTAAGAGCTTCGGTTTTGCT
CTCTTTCCTGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACA
ACCACAATGTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTC
CCCAATATTATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTAT
TTTCCCCGAAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACAT
TGAAGGACGTCGCAATCGAATGGCGGGGGAAGTGGACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_107920ATCC64974_107920Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107920-T1ATCC64974_107920-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107920-T1.cdsATCC64974_107920-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107920-T1.exon4ATCC64974_107920-T1.exon4Aspergillus niger N402exon
ATCC64974_107920-T1.exon3ATCC64974_107920-T1.exon3Aspergillus niger N402exon
ATCC64974_107920-T1.exon2ATCC64974_107920-T1.exon2Aspergillus niger N402exon
ATCC64974_107920-T1.exon1ATCC64974_107920-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3848891..3850332 -
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