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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3863307..3865424- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_107980-T1 ID=ATCC64974_107980-T1|Name=ATCC64974_107980-T1|organism=Aspergillus niger N402|type=mRNA|length=2118bp|location=Sequence derived from alignment at OGUI01000017.1:3863307..3865424- (Aspergillus niger N402)
ATGATTTCCGCATCACCTGTTCCCGTGGGGTCCAGCGTCTTTTTTACTTT
GGCCCTCCTTACGATCTCCGTGCTAGTTCTGTTACTTCTGCGGCGCTTTC
TCACTCTCCGCGCGACTCCGGCCTACCTTTCAATCCCCGTCTTCCTTGCA
CTCGCGCTTCCGGCCAGTGTAGTTCTTCTGGTCCCCATTGACCTAGCATC
AAGCTCACGCGATGGCGGAGGCCCCACGGCTATTTGGCTACCCGACCGCC
TAATTCTCGTCTCCTGGCGCATTGCTTACTGGCTAATCTTTGTGCTGACA
TGGTAGGTGATGTGCAGCACGATGTATCCGGTCGCGACCGTCTCAATTTA
GATCAACACTGACTCTTTACTTCGTCTCAGGGCCATCCTTCCTTTACTCG
GAGAATACATTGATTCGGGTTACCGTGAGCCGAAGGGTCGCATTCAATAC
TCCATTCGTTCCAATGCGCGGTATCAACTGATCGTGCTGTGCTGTGCAAC
GGTCGGATTAATCTACATTTCGATCCAGAATGGCTTTGAATTCACCTCGA
TTAAGACGCTAGTGATGGCTCTTGCATATGTTTGGGGTCTGGTTCTGGCC
ATCTATCTGATGGGTCACGGACTTGTTTCCATTCCCCGCACGCTCTTCCG
TAACTCCAACGTCAGTGGTCGTCTGCGGAGGATCCAAGCACATGCTCCGA
AGCTGCACGACCGTTTGATGGACGCGATCAATGACCTGGAAAGCCTGGAA
TCGCAAGTCGCCCAACTGCAGCGTCGCAAAACGGGCACCGCTCGCGATTT
TCAAGAGTGGATTGATGAATTGGCAGAGACGTCGAACCCGCCCGAGCTGC
GTTCGGGGCTCTTAGAACAGGCGGATGGGCCCGGCACTATCCCTGCCGTC
ATTACTGAACGTTACCTTGCGGACTTGACCCGTCGTCTTCAGCGCGCTCG
GCATCAAAAGGCTCGCTTCGTCGACGAGTGGGATCGCTTGGTCTTATCCG
CAGCAGACATGCAGGCAATTATCAATTCGTCGGCTTCTAAGAAGCTCGAG
TTTATTCACTCCCCCCATCGATCATCTTGGCTCCCGAGCCTTAACTTTCT
GAGTCCATACATGCGATACCATCTCTATGTGCATGTTATTCCAAACGTGC
GACTTGGACTAGGCGCGGTTTTCTCGGCGGCCTCCGTGTGCGTTGTCTGG
TCGGAGTTGGTCAAGTCCTTGGCGCCTCGGCTATCCGTCGTGACGCTTTC
TGTGGTTTCCTACCACAAGGAACCGGCGCCGGTCGACTTTGGGCGCCAAT
TGATTGCCTCTGCTTGGCTGCTGTACATGTGCTCGGCAGCATTGGTGGGT
GTCAACGACGCCAAAGTGTGGGGCAACCGTGCTTTGGTCCGCCGAAACAC
GTACGGGGAGAGTGCCTGTTGGTATGCGGGGCTAGTGGCCAGACTGACCG
TTCCCATCGCATACAACTTCTTGACCTTTTTGCCTGCGACCGTCCGGCAA
AGCACCACTTTCTACAAGTTCTTGGGCCGGTTCATTGACCTTACCCCGCT
CGGAAAGGGCTTTGATTACTTTTTCCCGGTCTTCATTCTGGTTCCTATCG
GTGCCACCCTTTTCAACCTCTACGGTCGCGTCCAGAATATCTGCAGCTGG
GGTCTTCTGGAAGAGGATGATGATGACCTGGAGAATAACCCCGGTGGCTA
CGGGCTAGGCGGATGGCGAGAGGGACGTGATCTTATCGACCGGGAGCTCA
ACGGCCTCGGTTCTTTGGGACTCTCCCCTCGTGGCGGTCGGTCACCTCGC
CCGTCCAGTCGCATTGACGATGACACGCCAGCCTTCTCCTCCTCCCGCAC
CGCACTCCTAGAGAATTCTAGAACCCCTCGAGCCTCCAGGGGAACACCAG
CCACCACTCCTTTAATGGAGGATGAGGATGAAGATAACTTTTTCCAGTCC
TTTGCTCACCGAGTAAGAAACACTTTCGAGACCGCCAGCAAGCCCCAGTG
GCTGCAGGGCGACTCCTTCCGTCTCCCCAGATGGATGGGCAGCGAAAGCA
ATGAGGGCGATAGCGGACTGGCGAGGTGGTTTGGTGGTCGACCAGCACCT
GGCGGAGTCCGACTGTAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3863307..3865424- >ATCC64974_107980-T1 ID=ATCC64974_107980-T1|Name=ATCC64974_107980-T1|organism=Aspergillus niger N402|type=CDS|length=4080bp|location=Sequence derived from alignment at OGUI01000017.1:3863307..3865424- (Aspergillus niger N402)
GGCCATCCTTCCTTTACTCGGAGAATACATTGATTCGGGTTACCGTGAGC
CGAAGGGTCGCATTCAATACTCCATTCGTTCCAATGCGCGGTATCAACTG
ATCGTGCTGTGCTGTGCAACGGTCGGATTAATCTACATTTCGATCCAGAA
TGGCTTTGAATTCACCTCGATTAAGACGCTAGTGATGGCTCTTGCATATG
TTTGGGGTCTGGTTCTGGCCATCTATCTGATGGGTCACGGACTTGTTTCC
ATTCCCCGCACGCTCTTCCGTAACTCCAACGTCAGTGGTCGTCTGCGGAG
GATCCAAGCACATGCTCCGAAGCTGCACGACCGTTTGATGGACGCGATCA
ATGACCTGGAAAGCCTGGAATCGCAAGTCGCCCAACTGCAGCGTCGCAAA
ACGGGCACCGCTCGCGATTTTCAAGAGTGGATTGATGAATTGGCAGAGAC
GTCGAACCCGCCCGAGCTGCGTTCGGGGCTCTTAGAACAGGCGGATGGGC
CCGGCACTATCCCTGCCGTCATTACTGAACGTTACCTTGCGGACTTGACC
CGTCGTCTTCAGCGCGCTCGGCATCAAAAGGCTCGCTTCGTCGACGAGTG
GGATCGCTTGGTCTTATCCGCAGCAGACATGCAGGCAATTATCAATTCGT
CGGCTTCTAAGAAGCTCGAGTTTATTCACTCCCCCCATCGATCATCTTGG
CTCCCGAGCCTTAACTTTCTGAGTCCATACATGCGATACCATCTCTATGT
GCATGTTATTCCAAACGTGCGACTTGGACTAGGCGCGGTTTTCTCGGCGG
CCTCCGTGTGCGTTGTCTGGTCGGAGTTGGTCAAGTCCTTGGCGCCTCGG
CTATCCGTCGTGACGCTTTCTGTGGTTTCCTACCACAAGGAACCGGCGCC
GGTCGACTTTGGGCGCCAATTGATTGCCTCTGCTTGGCTGCTGTACATGT
GCTCGGCAGCATTGGTGGGTGTCAACGACGCCAAAGTGTGGGGCAACCGT
GCTTTGGTCCGCCGAAACACGTACGGGGAGAGTGCCTGTTGGTATGCGGG
GCTAGTGGCCAGACTGACCGTTCCCATCGCATACAACTTCTTGACCTTTT
TGCCTGCGACCGTCCGGCAAAGCACCACTTTCTACAAGTTCTTGGGCCGG
TTCATTGACCTTACCCCGCTCGGAAAGGGCTTTGATTACTTTTTCCCGGT
CTTCATTCTGGTTCCTATCGGTGCCACCCTTTTCAACCTCTACGGTCGCG
TCCAGAATATCTGCAGCTGGGGTCTTCTGGAAGAGGATGATGATGACCTG
GAGAATAACCCCGGTGGCTACGGGCTAGGCGGATGGCGAGAGGGACGTGA
TCTTATCGACCGGGAGCTCAACGGCCTCGGTTCTTTGGGACTCTCCCCTC
GTGGCGGTCGGTCACCTCGCCCGTCCAGTCGCATTGACGATGACACGCCA
GCCTTCTCCTCCTCCCGCACCGCACTCCTAGAGAATTCTAGAACCCCTCG
AGCCTCCAGGGGAACACCAGCCACCACTCCTTTAATGGAGGATGAGGATG
AAGATAACTTTTTCCAGTCCTTTGCTCACCGAGTAAGAAACACTTTCGAG
ACCGCCAGCAAGCCCCAGTGGCTGCAGGGCGACTCCTTCCGTCTCCCCAG
ATGGATGGGCAGCGAAAGCAATGAGGGCGATAGCGGACTGGCGAGGTGGT
TTGGTGGTCGACCAGCACCTGGCGGAGTCCGACTGTAAATGATTTCCGCA
TCACCTGTTCCCGTGGGGTCCAGCGTCTTTTTTACTTTGGCCCTCCTTAC
GATCTCCGTGCTAGTTCTGTTACTTCTGCGGCGCTTTCTCACTCTCCGCG
CGACTCCGGCCTACCTTTCAATCCCCGTCTTCCTTGCACTCGCGCTTCCG
GCCAGTGTAGTTCTTCTGGTCCCCATTGACCTAGCATCAAGCTCACGCGA
TGGCGGAGGCCCCACGGCTATTTGGCTACCCGACCGCCTAATTCTCGTCT
CCTGGCGCATTGCTTACTGGCTAATCTTTGTGCTGACATGGGCCATCCTT
CCTTTACTCGGAGAATACATTGATTCGGGTTACCGTGAGCCGAAGGGTCG
CATTCAATACTCCATTCGTTCCAATGCGCGGTATCAACTGATCGTGCTGT
GCTGTGCAACGGTCGGATTAATCTACATTTCGATCCAGAATGGCTTTGAA
TTCACCTCGATTAAGACGCTAGTGATGGCTCTTGCATATGTTTGGGGTCT
GGTTCTGGCCATCTATCTGATGGGTCACGGACTTGTTTCCATTCCCCGCA
CGCTCTTCCGTAACTCCAACGTCAGTGGTCGTCTGCGGAGGATCCAAGCA
CATGCTCCGAAGCTGCACGACCGTTTGATGGACGCGATCAATGACCTGGA
AAGCCTGGAATCGCAAGTCGCCCAACTGCAGCGTCGCAAAACGGGCACCG
CTCGCGATTTTCAAGAGTGGATTGATGAATTGGCAGAGACGTCGAACCCG
CCCGAGCTGCGTTCGGGGCTCTTAGAACAGGCGGATGGGCCCGGCACTAT
CCCTGCCGTCATTACTGAACGTTACCTTGCGGACTTGACCCGTCGTCTTC
AGCGCGCTCGGCATCAAAAGGCTCGCTTCGTCGACGAGTGGGATCGCTTG
GTCTTATCCGCAGCAGACATGCAGGCAATTATCAATTCGTCGGCTTCTAA
GAAGCTCGAGTTTATTCACTCCCCCCATCGATCATCTTGGCTCCCGAGCC
TTAACTTTCTGAGTCCATACATGCGATACCATCTCTATGTGCATGTTATT
CCAAACGTGCGACTTGGACTAGGCGCGGTTTTCTCGGCGGCCTCCGTGTG
CGTTGTCTGGTCGGAGTTGGTCAAGTCCTTGGCGCCTCGGCTATCCGTCG
TGACGCTTTCTGTGGTTTCCTACCACAAGGAACCGGCGCCGGTCGACTTT
GGGCGCCAATTGATTGCCTCTGCTTGGCTGCTGTACATGTGCTCGGCAGC
ATTGGTGGGTGTCAACGACGCCAAAGTGTGGGGCAACCGTGCTTTGGTCC
GCCGAAACACGTACGGGGAGAGTGCCTGTTGGTATGCGGGGCTAGTGGCC
AGACTGACCGTTCCCATCGCATACAACTTCTTGACCTTTTTGCCTGCGAC
CGTCCGGCAAAGCACCACTTTCTACAAGTTCTTGGGCCGGTTCATTGACC
TTACCCCGCTCGGAAAGGGCTTTGATTACTTTTTCCCGGTCTTCATTCTG
GTTCCTATCGGTGCCACCCTTTTCAACCTCTACGGTCGCGTCCAGAATAT
CTGCAGCTGGGGTCTTCTGGAAGAGGATGATGATGACCTGGAGAATAACC
CCGGTGGCTACGGGCTAGGCGGATGGCGAGAGGGACGTGATCTTATCGAC
CGGGAGCTCAACGGCCTCGGTTCTTTGGGACTCTCCCCTCGTGGCGGTCG
GTCACCTCGCCCGTCCAGTCGCATTGACGATGACACGCCAGCCTTCTCCT
CCTCCCGCACCGCACTCCTAGAGAATTCTAGAACCCCTCGAGCCTCCAGG
GGAACACCAGCCACCACTCCTTTAATGGAGGATGAGGATGAAGATAACTT
TTTCCAGTCCTTTGCTCACCGAGTAAGAAACACTTTCGAGACCGCCAGCA
AGCCCCAGTGGCTGCAGGGCGACTCCTTCCGTCTCCCCAGATGGATGGGC
AGCGAAAGCAATGAGGGCGATAGCGGACTGGCGAGGTGGTTTGGTGGTCG
ACCAGCACCTGGCGGAGTCCGACTGTAAATGATTTCCGCATCACCTGTTC
CCGTGGGGTCCAGCGTCTTTTTTACTTTGGCCCTCCTTACGATCTCCGTG
CTAGTTCTGTTACTTCTGCGGCGCTTTCTCACTCTCCGCGCGACTCCGGC
CTACCTTTCAATCCCCGTCTTCCTTGCACTCGCGCTTCCGGCCAGTGTAG
TTCTTCTGGTCCCCATTGACCTAGCATCAAGCTCACGCGATGGCGGAGGC
CCCACGGCTATTTGGCTACCCGACCGCCTAATTCTCGTCTCCTGGCGCAT
TGCTTACTGGCTAATCTTTGTGCTGACATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_107980-T1 | ATCC64974_107980-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR006876 |
| DBxref | PFAM:PF04791 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3863307..3865424 - |
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