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ATCC64974_108030-T1, ATCC64974_108030-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108030-T1
Unique NameATCC64974_108030-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3882469..3884041+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108030-T1 ID=ATCC64974_108030-T1|Name=ATCC64974_108030-T1|organism=Aspergillus niger N402|type=mRNA|length=1573bp|location=Sequence derived from alignment at OGUI01000017.1:3882469..3884041+ (Aspergillus niger N402)
ATGGCGTACGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACA
CCACAATAGAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCC
TGGTTAGTTCGCAGTTGAACAAGGCCTCTTCGCTTACAATATCTAACGCT
GCTATTAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATC
CCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAAT
GGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCG
TCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCC
GACATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTT
ACGGCGGTTGATGATGGAGGTGCGTATAAACCCGCTTCTTATTTGAAACA
GATGAGCTCAGTCGGACCTAACACGGCATATGGAAACATAGTGTGGTGTC
AATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGT
TAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAA
CGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGC
ATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGA
AATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTAC
GACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAA
GAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACG
GCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAG
AAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAG
TCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAAT
CGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGT
TTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGAT
ATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAG
GAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGC
AGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATC
GAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCG
CATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTG
AAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAG
AAGAAGGTAAATGTCTCTTGTTTCCTTCGGCTTTGCATGCTTTACTAATT
TCCATCCAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAG
CGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCA
CGGACATGGAGAAATGCCTATAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3882469..3884041+

>ATCC64974_108030-T1 ID=ATCC64974_108030-T1|Name=ATCC64974_108030-T1|organism=Aspergillus niger N402|type=CDS|length=5568bp|location=Sequence derived from alignment at OGUI01000017.1:3882469..3884041+ (Aspergillus niger N402)
ATGGCGTACGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACA
CCACAATAGAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCC
TGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCCTTC
ACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGTCTT
TGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCGAGC
CAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGACATT
GTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACGGCG
GTTGATGATGGAGTGTGGTGTCAATGATTTTATGTTTACCGATCTCACCA
AGCCAACGCATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTT
GTCAGATTCCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAA
GGGCGAGAAGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGG
AGATGGAGCAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAG
GCACAGGTTAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCT
ACTCGAATTGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAG
CCAAGGCGGATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAA
AAGGTCGTTCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTAT
GGAGAGCCCCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATC
TCCTTCGTGAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCT
CTGCAAACATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGC
TTGTGTGCGCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATG
ATGAAGAGTCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGG
AATAATGTCAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCT
GGCACGATGGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAA
AAGCCGAAGTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAA
CAACTCCGGGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAG
AATCCGGATCGAACAAACTGAGAAGAAGATGGCCGATCTCAAGGAGAACA
TTGAGAGCGAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCA
CACATCAAACTCTATATCACGGACATGGAGAAATGCCTATAAATGGCGTA
CGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATA
GAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGCCGGAC
AAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCCTTCACCGCCGC
CGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGTCTTTGAATGGT
TTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCGAGCCAGCGATG
CGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGACATTGTACCTAC
CGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACGGCGGTTGATGA
TGGAGTGTGGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACG
CATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATT
CCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGA
AGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAG
CAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGT
TAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAAT
TGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCG
GATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGT
TCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCC
CCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGT
GAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAAC
ATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGC
GCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAG
TCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGT
CAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGAT
GGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAA
GTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCG
GGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGA
TCGAACAAACTGAGAAGAAGATGGCCGATCTCAAGGAGAACATTGAGAGC
GAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAA
ACTCTATATCACGGACATGGAGAAATGCCTATAAATGGCGTACGGCAGCC
GAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGC
AAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGCCGGACAAGGAAAT
CGCAGGATGCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGA
TCAAGCCAAACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAG
CTCCTTATGAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGC
GGCGGACGATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGC
GCAACCTCATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGTGT
GGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCG
ACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAAT
CTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAG
TCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCT
CGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGA
AGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGA
AACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGC
AAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGC
GACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCT
CTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGC
GCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGG
ACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTC
GAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGC
CTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAG
TGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAG
AGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCA
GGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGC
GAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAA
ACTGAGAAGAAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCA
AAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATA
TCACGGACATGGAGAAATGCCTATAAATGGCGTACGGCAGCCGAATGAGC
CAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGCAAGAAGGA
GGATGAGAATGATGCTCTTATGCGCCTGCCGGACAAGGAAATCGCAGGAT
GCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGATCAAGCCA
AACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTAT
GAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGCGGCGGACG
ATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGCGCAACCTC
ATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGTGTGGTGTCAA
TGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGTTA
AGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAACG
CCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGCAT
TGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGAAA
TGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTACGA
CGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAAGA
GCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACGGC
AAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAGAA
GTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAGTC
GTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAATCG
ACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGTTT
ACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGATAT
ATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAGGA
ATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGCAG
ACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATCGA
GGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCGCA
TGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTGAA
AAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAGAA
GAAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTC
ACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCACGGAC
ATGGAGAAATGCCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031262Ndc80 complex
GO:0000776kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NUF2ATCC64974_108030Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108030-T1.exon1ATCC64974_108030-T1.exon1Aspergillus niger N402exon
ATCC64974_108030-T1.exon2ATCC64974_108030-T1.exon2Aspergillus niger N402exon
ATCC64974_108030-T1.exon3ATCC64974_108030-T1.exon3Aspergillus niger N402exon
ATCC64974_108030-T1.exon4ATCC64974_108030-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108030-T1.cdsATCC64974_108030-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108030-T1ATCC64974_108030-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR038275
DBxrefInterPro:IPR005549
DBxrefInterPro:IPR041112
DBxrefPFAM:PF03800
DBxrefPFAM:PF18595
Productkinetochore-associated Ndc80 complex subunit nuf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3882469..3884041 +
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