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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3916521..3917226+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_108150-T1 ID=ATCC64974_108150-T1|Name=ATCC64974_108150-T1|organism=Aspergillus niger N402|type=mRNA|length=706bp|location=Sequence derived from alignment at OGUI01000017.1:3916521..3917226+ (Aspergillus niger N402)
ATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGTGAGAA
TACCCCATCGAAGTCCCTATTTTAAATCACTGGAGAAATTGAATCCATCT
AACCTGCATACCTACAGGCCCGAACATCGTCCCGTACGTCGTCGCATTTA
TTCCCTTTCCTTCCCTACCTTTCACGAAAGGCACATCACTACCCAATCCC
TATACAATACCGCCACATATCAATTGCAACCGCTACTCGACACATTCTCT
ACTGGAAACTGGAAATAAAATACTAATAAAAGCTATGATAGTCTCCCTCT
CCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGCAGA
AGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGGTC
CACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATGGTCGG
CAGGAAGTTGGGGGAGTTTGTTGCGTGAGTTTTTTCTCTATCCAACTCTC
TTCTTTTTTTTTCTTTTTCGCCTGGGGGGTTTGGAGTGGGATATAGGAAA
TGTGGTGAACTTGGAGGATTTGAAGGTTGAAAGGAAAGAGGGAATATTTG
GTGGAATGGGATATTGATTGGTGTATGATGATGGACTTTCTGCTAACTGA
TTGGTTTTGGTAGGACTCGGAAGAGGTTCACGTATAAGCAGTCGAAGAAC
AAATGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3916521..3917226+ >ATCC64974_108150-T1 ID=ATCC64974_108150-T1|Name=ATCC64974_108150-T1|organism=Aspergillus niger N402|type=CDS|length=1140bp|location=Sequence derived from alignment at OGUI01000017.1:3916521..3917226+ (Aspergillus niger N402)
ATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGCCCGAA
CATCGTCCCTCTCCCTCTCCCCCGCAAACTCCCCGCTCCGCCAGGAACAC
CACCGATCAAGACGCAGAAGCGCGGCGCCACGATCCTGCCTAACTTCGTG
GGATTGAAGTTCCAGGTCCACAATGGGAAGATTTATCAGGATGTTGTGAT
CACGGAGGAGATGGTCGGCAGGAAGTTGGGGGAGTTTGTTGCGACTCGGA
AGAGGTTCACGTATAAGCAGTCGAAGAACAAATGAATGTTTCCCACGCGA
GCTCTCTTCTCCCGCTCGGTCTGGAAGGGCCCGAACATCGTCCCTCTCCC
TCTCCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGC
AGAAGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAG
GTCCACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATGGT
CGGCAGGAAGTTGGGGGAGTTTGTTGCGACTCGGAAGAGGTTCACGTATA
AGCAGTCGAAGAACAAATGAATGTTTCCCACGCGAGCTCTCTTCTCCCGC
TCGGTCTGGAAGGGCCCGAACATCGTCCCTCTCCCTCTCCCCCGCAAACT
CCCCGCTCCGCCAGGAACACCACCGATCAAGACGCAGAAGCGCGGCGCCA
CGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGGTCCACAATGGGAAG
ATTTATCAGGATGTTGTGATCACGGAGGAGATGGTCGGCAGGAAGTTGGG
GGAGTTTGTTGCGACTCGGAAGAGGTTCACGTATAAGCAGTCGAAGAACA
AATGAATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGC
CCGAACATCGTCCCTCTCCCTCTCCCCCGCAAACTCCCCGCTCCGCCAGG
AACACCACCGATCAAGACGCAGAAGCGCGGCGCCACGATCCTGCCTAACT
TCGTGGGATTGAAGTTCCAGGTCCACAATGGGAAGATTTATCAGGATGTT
GTGATCACGGAGGAGATGGTCGGCAGGAAGTTGGGGGAGTTTGTTGCGAC
TCGGAAGAGGTTCACGTATAAGCAGTCGAAGAACAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_108150-T1 | ATCC64974_108150-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR020934 |
| DBxref | InterPro:IPR023575 |
| DBxref | InterPro:IPR002222 |
| DBxref | PFAM:PF00203 |
| Product | mitochondrial ribosomal small subunit component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3916521..3917226 + |
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