You are here

Home

ATCC64974_108340-T1, ATCC64974_108340-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_108340-T1
Unique NameATCC64974_108340-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3973568..3974378-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_108340-T1 ID=ATCC64974_108340-T1|Name=ATCC64974_108340-T1|organism=Aspergillus niger N402|type=mRNA|length=811bp|location=Sequence derived from alignment at OGUI01000017.1:3973568..3974378- (Aspergillus niger N402)
ATGAGAGCCGATCTTGAGACCGCCCGCATCAAATCACTGCCGGACGATGG
ATTCTACATAGCGGATTTCATCTCGGAGGATGAAGAGGAGTTTCTCCTCC
GAAAGGTGAGTGAGTTACCGTGGCTTTACTGTGCAGTGGCCTAAGTTCAT
TCAGGCCCTGTGGGGATGTTGGGCGCTCATGGACCCCCGGCTATAGATAA
CGACTGCGCCGTTACCCCGCTGGACTCATCTAGCTCACCGGCGACTTCAA
ACCTGGCCTTCGGCCCTGACAAAATCGAACGCGCTCATCTCCTCCCCGTT
GCCCTCTTGGCTCGTCTCACCCATCATCACCCCTCGCTTCGACTCCTTGG
GTCTTTTCGCGGACGCCCCGCACCACGCCCCGAATCATGTTCTGGTAAAT
GAATACCGCCCGGGACAGGGCATAATGCCGCATGAAGACGGTGCTGCCTA
CTACCCGCTCGTAGCTACTGTGAGCCTGGGAGCTCCTATCGTGCTAGATC
TGTACGAGAGAAGCGAGGATGGCAAAGGGAGCGGACATGGCCGGCGTCCG
GTGTATAGGATTTTGCAGGAAAGGCGCAGCCTGCTCGTTACCACGAAGAG
TATCTATACCGACTTTCTGCATGGAATTGCAGAGACCACCAGGGATGAAG
GGCTTGGCGCAGAATCCATCTGCAACTGGGATTTGTTGCGGGAGCCAGAC
AGATATGAGTGCGGCTGGCTGGAGAGGGAGACTAGGATAAGCTTGACTTA
TCGAGATGTGCTCAAAGTTGCCAGTCTCGGGAATACGATGAAGTTCCTCG
GCAGTCGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:3973568..3974378-

>ATCC64974_108340-T1 ID=ATCC64974_108340-T1|Name=ATCC64974_108340-T1|organism=Aspergillus niger N402|type=CDS|length=1440bp|location=Sequence derived from alignment at OGUI01000017.1:3973568..3974378- (Aspergillus niger N402)
ATAACGACTGCGCCGTTACCCCGCTGGACTCATCTAGCTCACCGGCGACT
TCAAACCTGGCCTTCGGCCCTGACAAAATCGAACGCGCTCATCTCCTCCC
CGTTGCCCTCTTGGCTCGTCTCACCCATCATCACCCCTCGCTTCGACTCC
TTGGGTCTTTTCGCGGACGCCCCGCACCACGCCCCGAATCATGTTCTGGT
AAATGAATACCGCCCGGGACAGGGCATAATGCCGCATGAAGACGGTGCTG
CCTACTACCCGCTCGTAGCTACTGTGAGCCTGGGAGCTCCTATCGTGCTA
GATCTGTACGAGAGAAGCGAGGATGGCAAAGGGAGCGGACATGGCCGGCG
TCCGGTGTATAGGATTTTGCAGGAAAGGCGCAGCCTGCTCGTTACCACGA
AGAGTATCTATACCGACTTTCTGCATGGAATTGCAGAGACCACCAGGGAT
GAAGGGCTTGGCGCAGAATCCATCTGCAACTGGGATTTGTTGCGGGAGCC
AGACAGATATGAGTGCGGCTGGCTGGAGAGGGAGACTAGGATAAGCTTGA
CTTATCGAGATGTGCTCAAAGTTGCCAGTCTCGGGAATACGATGAAGTTC
CTCGGCAGTCGGTGAATGAGAGCCGATCTTGAGACCGCCCGCATCAAATC
ACTGCCGGACGATGGATTCTACATAGCGGATTTCATCTCGGAGGATGAAG
AGGAGTTTCTCCTCCGAAAGATAACGACTGCGCCGTTACCCCGCTGGACT
CATCTAGCTCACCGGCGACTTCAAACCTGGCCTTCGGCCCTGACAAAATC
GAACGCGCTCATCTCCTCCCCGTTGCCCTCTTGGCTCGTCTCACCCATCA
TCACCCCTCGCTTCGACTCCTTGGGTCTTTTCGCGGACGCCCCGCACCAC
GCCCCGAATCATGTTCTGGTAAATGAATACCGCCCGGGACAGGGCATAAT
GCCGCATGAAGACGGTGCTGCCTACTACCCGCTCGTAGCTACTGTGAGCC
TGGGAGCTCCTATCGTGCTAGATCTGTACGAGAGAAGCGAGGATGGCAAA
GGGAGCGGACATGGCCGGCGTCCGGTGTATAGGATTTTGCAGGAAAGGCG
CAGCCTGCTCGTTACCACGAAGAGTATCTATACCGACTTTCTGCATGGAA
TTGCAGAGACCACCAGGGATGAAGGGCTTGGCGCAGAATCCATCTGCAAC
TGGGATTTGTTGCGGGAGCCAGACAGATATGAGTGCGGCTGGCTGGAGAG
GGAGACTAGGATAAGCTTGACTTATCGAGATGTGCTCAAAGTTGCCAGTC
TCGGGAATACGATGAAGTTCCTCGGCAGTCGGTGAATGAGAGCCGATCTT
GAGACCGCCCGCATCAAATCACTGCCGGACGATGGATTCTACATAGCGGA
TTTCATCTCGGAGGATGAAGAGGAGTTTCTCCTCCGAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_108340ATCC64974_108340Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108340-T1ATCC64974_108340-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108340-T1.cdsATCC64974_108340-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_108340-T1.exon2ATCC64974_108340-T1.exon2Aspergillus niger N402exon
ATCC64974_108340-T1.exon1ATCC64974_108340-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR005123
DBxrefInterPro:IPR027450
DBxrefInterPro:IPR037151
DBxrefPFAM:PF13532
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3973568..3974378 -
Powered by Drupal