|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4288086..4289399- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_109380-T1 ID=ATCC64974_109380-T1|Name=ATCC64974_109380-T1|organism=Aspergillus niger N402|type=mRNA|length=1314bp|location=Sequence derived from alignment at OGUI01000017.1:4288086..4289399- (Aspergillus niger N402)
ATGCTCCCACCCCCCGATGACCCCGACTCTACCACCGACACAACAATCAC
GTCCACCAGATCACCCCTCCCCCTCACCACCGACAATGCCACCACCACCA
CGAAGAACCAGAACAACCACCACCACCCCCGCAAACCAAAACCCACGCTC
CTCAACCCCCTTCAAAAAGGCATCACAACCTACCTAACCCACCACCACAC
CGATGCGACCCTCCCCCCCTCCTCCCTTCCCAAACGCTTCACCATCTACG
CCCCCCTCCTCCTCCTTCCCGTCAACGCCCTCACGACCCCACCCGCCTGG
CACACCCTCTATGCCTCCCTAACCGCATCTCAAAGGACCACTCTCTACGA
ATGCATTCTCTCCGCCTTCTCGCGCTACAACCTCACCCACATCGCCATCA
ACGCCCCCATCGCATTAACCGACGCGCAAGGCACCGAGAACCGCATGCGC
AGTCCCGGCGGCTTACTCCCACTACACGGGGATTTTGGGCCCTCGCCCAG
CACAATCCTGAATCTGGATGCGCCAACAGCGGAGGACCTGGGGCGTGCGT
TGTGGGTGAGTACGGTGCAGAACCATGGCATTGAGCAGTTTTGGGCACCT
ATGTATACGATGTTCTCGAGGGGGAATGTTACGGAGAAGGCAAGGATATT
GGATGGCATGGAGGGGTTGCGCAGGGAGGATATGGAGGGGGCAGGGATGA
GTGTGGTGGATATGTATGCGGGGATTGGGTATTTTGTGTTTTCGTACCTG
AGGCAAGGGGTGCGGAGGGTTTGGGGGTGGGAGATAAATGGCTGGTCCGT
GGAGGGGTTGCGGAGGGGGTGTATGGCTAATGGGTGGGGGTGTAGGGTTG
TTAAGGTTGATGGTGATGGGGTATTGGAAGGGGGTATAGGGGCGGAGGAG
TTGGTGGATGGGTTGAGGAATGAGGATAGAGTGGTGGTGTTTCATGGGGA
TAATCGGTTTGCGGCGCGGGTTTTGGCACAGATCAGGCATGTGATGGAGG
CGCGCGGGCGGTGGGCGCCTGTCAGGCATGTTAATTTGGGCTTGTTGCCC
TCGTCGGCGGCTGCTTGGGGGGATGCGTGTCGGATGGTGGATGGACGGTT
GGGGGGTTGGCTGCATGTGCATGAGAATGTGGATGTGCGGCGCATTGAGG
AGATGGGGGATCATATCACGAAGGAGATTGGGAGGTTAAGGGCCACGGCT
TTGGAGGTTGAAGATATGGTGGCGGAGTGTCGGCATGTTGAACAGGTCAA
GACTTACGCTCCGGGGGTGATGCATTGCGTGTTTGATGTCAAGGTGCCGG
CACTGGAGTTATAA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4288086..4289399- >ATCC64974_109380-T1 ID=ATCC64974_109380-T1|Name=ATCC64974_109380-T1|organism=Aspergillus niger N402|type=CDS|length=1314bp|location=Sequence derived from alignment at OGUI01000017.1:4288086..4289399- (Aspergillus niger N402)
ATGCTCCCACCCCCCGATGACCCCGACTCTACCACCGACACAACAATCAC
GTCCACCAGATCACCCCTCCCCCTCACCACCGACAATGCCACCACCACCA
CGAAGAACCAGAACAACCACCACCACCCCCGCAAACCAAAACCCACGCTC
CTCAACCCCCTTCAAAAAGGCATCACAACCTACCTAACCCACCACCACAC
CGATGCGACCCTCCCCCCCTCCTCCCTTCCCAAACGCTTCACCATCTACG
CCCCCCTCCTCCTCCTTCCCGTCAACGCCCTCACGACCCCACCCGCCTGG
CACACCCTCTATGCCTCCCTAACCGCATCTCAAAGGACCACTCTCTACGA
ATGCATTCTCTCCGCCTTCTCGCGCTACAACCTCACCCACATCGCCATCA
ACGCCCCCATCGCATTAACCGACGCGCAAGGCACCGAGAACCGCATGCGC
AGTCCCGGCGGCTTACTCCCACTACACGGGGATTTTGGGCCCTCGCCCAG
CACAATCCTGAATCTGGATGCGCCAACAGCGGAGGACCTGGGGCGTGCGT
TGTGGGTGAGTACGGTGCAGAACCATGGCATTGAGCAGTTTTGGGCACCT
ATGTATACGATGTTCTCGAGGGGGAATGTTACGGAGAAGGCAAGGATATT
GGATGGCATGGAGGGGTTGCGCAGGGAGGATATGGAGGGGGCAGGGATGA
GTGTGGTGGATATGTATGCGGGGATTGGGTATTTTGTGTTTTCGTACCTG
AGGCAAGGGGTGCGGAGGGTTTGGGGGTGGGAGATAAATGGCTGGTCCGT
GGAGGGGTTGCGGAGGGGGTGTATGGCTAATGGGTGGGGGTGTAGGGTTG
TTAAGGTTGATGGTGATGGGGTATTGGAAGGGGGTATAGGGGCGGAGGAG
TTGGTGGATGGGTTGAGGAATGAGGATAGAGTGGTGGTGTTTCATGGGGA
TAATCGGTTTGCGGCGCGGGTTTTGGCACAGATCAGGCATGTGATGGAGG
CGCGCGGGCGGTGGGCGCCTGTCAGGCATGTTAATTTGGGCTTGTTGCCC
TCGTCGGCGGCTGCTTGGGGGGATGCGTGTCGGATGGTGGATGGACGGTT
GGGGGGTTGGCTGCATGTGCATGAGAATGTGGATGTGCGGCGCATTGAGG
AGATGGGGGATCATATCACGAAGGAGATTGGGAGGTTAAGGGCCACGGCT
TTGGAGGTTGAAGATATGGTGGCGGAGTGTCGGCATGTTGAACAGGTCAA
GACTTACGCTCCGGGGGTGATGCATTGCGTGTTTGATGTCAAGGTGCCGG
CACTGGAGTTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0031591 | wybutosine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_109380-T1.exon1 | ATCC64974_109380-T1.exon1 | Aspergillus niger N402 | exon |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_109380-T1 | ATCC64974_109380-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR026274 |
| DBxref | InterPro:IPR030382 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4288086..4289399 - |
|
