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ATCC64974_109470-T1, ATCC64974_109470-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_109470-T1
Unique NameATCC64974_109470-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4315568..4316374+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_109470-T1 ID=ATCC64974_109470-T1|Name=ATCC64974_109470-T1|organism=Aspergillus niger N402|type=mRNA|length=807bp|location=Sequence derived from alignment at OGUI01000017.1:4315568..4316374+ (Aspergillus niger N402)
ATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGG
CCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTGTACGCCATCC
TATACTTTCCATACCAAACCTTTTTCTATTCAATCCCCTACCAATAACAA
GTACTAGATAACTGACAATCTGAAATCACTGATATAGTCCCGACTTCACA
ATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCACCTTCTA
CGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGCAGCGTC
TGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAGCAGAAA
CTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGATCCGTCG
CCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCGTTTGTTT
GGCCCGAGGCGCCGACGGATATGGCTCCGTATGTTATCTTCTCTATGTAT
CTGTTTGATATTGTTGTTGTTGTTGTTGTTGTCATTGTTGTTGAAGGATT
GGTGGGTTGTGGAAACAATGCTGACAATATGGGTGTTTGTGTGCAGATGG
GAGAAGGACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGA
TAAGCAGAAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGG
TCTATAAGGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGG
CCGACTTGGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAA
GTCGTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:4315568..4316374+

>ATCC64974_109470-T1 ID=ATCC64974_109470-T1|Name=ATCC64974_109470-T1|organism=Aspergillus niger N402|type=CDS|length=1773bp|location=Sequence derived from alignment at OGUI01000017.1:4315568..4316374+ (Aspergillus niger N402)
ATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGG
CCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTTCCCGACTTCA
CAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCACCTTC
TACGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGCAGCG
TCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAGCAGA
AACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGATCCGT
CGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCGTTTGT
TTGGCCCGAGGCGCCGACGGATATGGCTCCATGGGAGAAGGACCAGTTCT
TCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGGAT
GCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGATGC
GAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGCTT
TGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGAATGGTCCGA
CGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGC
GCCTCTCTCCCAACGGAAGCAGATCTTCCTTCCCGACTTCACAATCGCCC
TAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCACCTTCTACGTGCCG
CTCAACTTCAACAAACTGGATATGCGCGATTACCTGCAGCGTCTGTACGG
CGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAGCAGAAACTGACGA
GGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGATCCGTCGCCCGCAG
TCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCGTTTGTTTGGCCCGA
GGCGCCGACGGATATGGCTCCATGGGAGAAGGACCAGTTCTTCAAGGCTC
AGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGGATGCGGGGATG
AAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGATGCGAAGAAGTT
GTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGCTTTGGGGTTGG
GGCATTATGAGAGGCCGTTGGTTAAGTCGTGAATGGTCCGACGATTCTCC
AAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGCGCCTCTCTC
CCAACGGAAGCAGATCTTCCTTCCCGACTTCACAATCGCCCTAATCCGCA
CGCCCTTCCTTCCCCCCCGCTACGCCACCTTCTACGTGCCGCTCAACTTC
AACAAACTGGATATGCGCGATTACCTGCAGCGTCTGTACGGCGTGGGCGT
CGTCAGCGTGCGCTCATTCGTCGAACAGCAGAAACTGACGAGGTTGAAGT
CCCTGGGTCGCTATGGATATGGAAAGATCCGTCGCCCGCAGTCTAAGAAG
AAGATGACGGTCGAGATGAAGGAGGCGTTTGTTTGGCCCGAGGCGCCGAC
GGATATGGCTCCATGGGAGAAGGACCAGTTCTTCAAGGCTCAGAAATACC
AGGAGGAGATCCAGGATAAGCAGAAGCCGGATGCGGGGATGAAGGCGGAT
GAGAAGGAGAGGGAGGTCTATAAGGAGGATGCGAAGAAGTTGTTGGAGGG
TGCTAAGCCGTGGAGGCCGACTTGGAAGGCTTTGGGGTTGGGGCATTATG
AGAGGCCGTTGGTTAAGTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_109470ATCC64974_109470Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109470-T1.exon1ATCC64974_109470-T1.exon1Aspergillus niger N402exon
ATCC64974_109470-T1.exon2ATCC64974_109470-T1.exon2Aspergillus niger N402exon
ATCC64974_109470-T1.exon3ATCC64974_109470-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109470-T1.cdsATCC64974_109470-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_109470-T1ATCC64974_109470-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264HX6
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR013025
DBxrefPFAM:PF00276
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4315568..4316374 +
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