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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4350677..4351253+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_109540-T1 ID=ATCC64974_109540-T1|Name=ATCC64974_109540-T1|organism=Aspergillus niger N402|type=mRNA|length=577bp|location=Sequence derived from alignment at OGUI01000017.1:4350677..4351253+ (Aspergillus niger N402)
ATGGCGAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGCTCATTGTGGG
CGCCGGTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTA
AGGGTGTGAAGAGTATGGACTTTTGTAAGGTGAGCTGAAAGAACACTCCA
TTGACTGCTTTAAATCGGATCCGTCATTTGCAAGACGTCCAATTGGAGCT
ATCTGAAGTAGAAGAACGCGCAAGGCTCATATGGTTTACTGTAGGAATTC
AACGCCAGAACTGCACACATCAACACCGGTGTACCCATTCCTGCGCGTGT
CACTGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGTACTCCCACTA
CCACCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCGCAAGAATCGC
ATCCGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCAAGATATCCCT
CAAGCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAGACGCGACTGT
CTGGACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGCCCAGGCCAAA
TCCGTCGGCATCCAGGTTGTCCCATGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4350677..4351253+ >ATCC64974_109540-T1 ID=ATCC64974_109540-T1|Name=ATCC64974_109540-T1|organism=Aspergillus niger N402|type=CDS|length=924bp|location=Sequence derived from alignment at OGUI01000017.1:4350677..4351253+ (Aspergillus niger N402)
ATGGCGAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGCTCATTGTGGG
CGCCGGTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTA
AGGGTGTGAAGAGTATGGACTTTTGTAAGGAATTCAACGCCAGAACTGCA
CACATCAACACCGGTGTACCCATTCCTGCGCGTGTCACTGTCCGACCCGA
CCGTTCCTTCACCTTCGACCTCCGTACTCCCACTACCACCTATCTGCTGT
TGCAAGCGGCCAACGTGGAACCTCGCAAGAATCGCATCCGTGGCGCCCAG
AACCCGGGCCATGAGTTCATCGGCAAGATATCCCTCAAGCATGTCTACGA
AATCGCCAAGATCAAGCACTCCGAGACGCGACTGTCTGGACTGAGCCTGC
AGGGATTGTGCAAGAGTGTCATTGCCCAGGCCAAATCCGTCGGCATCCAG
GTTGTCCCATGAATGGCGAAGAAGGCATTGGCCAAGGACCAGATTGTGAA
GCTCATTGTGGGCGCCGGTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGG
CCCTGGGTAGTAAGGGTGTGAAGAGTATGGACTTTTGTAAGGAATTCAAC
GCCAGAACTGCACACATCAACACCGGTGTACCCATTCCTGCGCGTGTCAC
TGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGTACTCCCACTACCA
CCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCGCAAGAATCGCATC
CGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCAAGATATCCCTCAA
GCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAGACGCGACTGTCTG
GACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGCCCAGGCCAAATCC
GTCGGCATCCAGGTTGTCCCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_109540-T1 | ATCC64974_109540-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BG5 |
| DBxref | InterPro:IPR036769 |
| DBxref | InterPro:IPR036796 |
| DBxref | InterPro:IPR020784 |
| DBxref | InterPro:IPR020783 |
| DBxref | InterPro:IPR006519 |
| DBxref | InterPro:IPR000911 |
| DBxref | PFAM:PF03946 |
| DBxref | PFAM:PF00298 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4350677..4351253 + |
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