|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000002.1:1108934..1109750- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_10970-T1 ID=ATCC64974_10970-T1|Name=ATCC64974_10970-T1|organism=Aspergillus niger N402|type=mRNA|length=817bp|location=Sequence derived from alignment at OGUI01000002.1:1108934..1109750- (Aspergillus niger N402)
ATGCTCGCGTGGTGAGTTGAGCAATACCTACCCAATCACCACGGCTGCGA
CCTCCACCCCCCAGACTAACAATAGTAAACTACAGGTACCAGAGATGTCT
TATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGGTAAGCTTCA
ATCCCCCCCATATCTCATTCTTTCAGTAAAGCTAAGACGGAAATAATCAG
ACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAAAGAA
GGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTATACG
GTGGTGGTAAGCCCAGCCCCCGATCCCTCACCCCCCTTCATTCCCTCTAA
ACAAAAGCAAAAATAATATACAGCTGTTTTCGGCCCGGTCGCCACAAAAT
GGTTCCAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACT
CTTGCGGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGAT
TGGTGTCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGG
AGAAGCTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTC
TGGCCAGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCG
TGTGTTGACGGTTAATGTGGTTAATATTGGTATGTATATTTCTCTGCTTC
TTTTCTACGGATGTATCTTGGATATTGGGTAAAGCTAATACTTGGATAGG
ATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGG
TTGCACCGGGAGTTTGA back to topCoding sequence (CDS) from alignment at OGUI01000002.1:1108934..1109750- >ATCC64974_10970-T1 ID=ATCC64974_10970-T1|Name=ATCC64974_10970-T1|organism=Aspergillus niger N402|type=CDS|length=2730bp|location=Sequence derived from alignment at OGUI01000002.1:1108934..1109750- (Aspergillus niger N402)
GATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAG
GTTGCACCGGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTC
CAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGC
GGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTG
TCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAG
CTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCC
AGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGT
TGACGGTTAATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCT
CGCCCAACAAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCC
GAACTGGCCGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCC
AGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATG
GAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTG
CACCGGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAAT
TCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCG
CGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTT
CCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCA
GTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCG
GTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGAC
GGTTAATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCC
CAACAAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAAC
TGGCCGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCG
TCCTCTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAAT
TGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACC
GGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCT
ACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCG
TTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTC
ACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAG
GACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTC
AGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTT
AATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAAC
AAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGC
CGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCT
CTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAATTGCT
TCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGA
GTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAG
AACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGG
TGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCA
GTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACG
TACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGAC
GCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATG
TGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGC
CGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAA
TGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCT
TGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAATTGCTTCCT
GAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTT
GACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAGAACC
GCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGGTGCT
GACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCAGTAT
GTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACGTACT
GGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGACGCTG
AACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATGTGGT
TAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTC
GAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGC
TTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGAC
GCAGAGCCTCACCACAGCGATGCTCGCGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_10970-T1 | ATCC64974_10970-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007248 |
| DBxref | PFAM:PF04117 |
| Product | Protein required for ethanol metabolism |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000002.1 | supercontig | OGUI01000002.1:1108934..1109750 - |
|
