You are here

Home

ATCC64974_110060-T1, ATCC64974_110060-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_110060-T1
Unique NameATCC64974_110060-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4529130..4530805-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_110060-T1 ID=ATCC64974_110060-T1|Name=ATCC64974_110060-T1|organism=Aspergillus niger N402|type=mRNA|length=1676bp|location=Sequence derived from alignment at OGUI01000017.1:4529130..4530805- (Aspergillus niger N402)
ATGCATTTCCAGCCTGTTTACCCAATATTTCACACCCCTACATTTGATAT
CAACGAGTGCCATTGGCTAGTGGTGCTAGCTCTCTCAGCAATAGGTTGCC
ATTTTGCTGGTTCCCAAGAGCAAAGCGAGTGTGCGCCGGTGTTTCATGAG
TTTCTTAGACGCGCTATAAGTGTTGAGGTGAGAGACAGTCTTTTTTATAC
TGTCGACCCATCATTGACCTTTTTCGTTCCTCTAGGAAGAGAAGTATTAT
GTCGATCGTGCACCCGTGTGGCTTCTTCAAGCATCAGTACTCAATTGCGT
TGGGATACTATACAGTTGTGATGAACGGGCTAGGCTTTTGGCGCTGAATA
CGTTTGGCAACTTGATAGGCTTTGTGAACCGCGAGAAACTTCTTAGTCGT
CCAGACAGACCCATACAACCTCTAAACGGGAAGACGAACGAGCAGCACTG
GGTGTCTTGGGTCGAGGACGAGATCAGAAGACGCATAGGCTACCTGATTT
GGGTACGTGCTCCGACCAATCATCTTGGGGGTGTAACGACTAACCGGCAA
TAGCTTCTGGATTGCACAATAGCATACCATTTTGACAGGCGCCCTCTGCT
CTCTCTTGACGAAAGCCAAGCAACGCTGCCTTCCCACGAGGCACTTTGGA
CGGCAAAATCTCTAGAGGCCTGGAAAGACGTACGGGGAAGGATGTCAGGT
ATTATACGTCTTTTATTCGCCAGCTCAGGATTTACAACTAACATGTCGTC
TTGAAGACCAGAAGGAATCCTCCCTTTACGATGCGGTCCTTGTAATGTAC
ATCGAGAAGGAGCTAGTACCTGATATCGGGGAGTTCAGTCAGCTTCTTCT
CATTCATGCGCTATACCACCGTATGTGGGAAGTGGGAGACTACTTCCGCC
GCCCCTTGTCCTTCTGGAACCCAACCTCGAAAAAGCAGTCACGGCATTCT
GCACTCCCGTCTGGCTCCGTCTGGCTGCCTGGTATTCCATCTTATTCCAA
GTGGCGAAACAGTGCGTGTGACTGCCTGGATATACTCCATTGGGCTGCTG
GCAGCACAGTAGCCAGGACCGCTGGCCTTGAACATCCCACAATCTTGCAT
CTCCATTTAGCCCGCATAATCCTCCTTGCTCCGTTTCGTGAAATACGGTC
ACTCGCAACATCTTTGGCGATGGAAGAGTCCCGTTGGTGTGAACGTGAAC
AGACCCTTGAATGGCACTATATACTACGCTGGGTCAAGCATGACCAGTAC
AAGGCTCGCCTGGCAGTTGTACACGCCGGTGCAATGCTAAGACATGCACG
CGATTTCTCAAGTCGTTCTTTCCATGAGCCAGTCGCTGTCTTCCTGGCAA
CACTAGTTCTGTGGGCATATGGCGCATGCTATACCTTCTTATCTGACATG
ACGAGCCGCCATGAGGCAAGCCACGGCATGCCGGAAAAGCCTCTGTTCAT
TCACCTCGACAGACCCTGCGATGATGAATTAGCCCAACTTTTCGTGCGCG
AGGGCCAAGGAATGAAAGCGGTTCTGACCGGCGTTGGGGATATATGTGCT
CCGCGAGGACCAGAGGAGACCCTCAAAGCTGGCTGCCTGATCCTTGCCGG
CCTTTCGTCGTGGGGGATCTCCAAACGATTTACCGCGATCTTGGGCAAGC
TTTCTGAAATAACATCCAAGTCGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4529130..4530805-

>ATCC64974_110060-T1 ID=ATCC64974_110060-T1|Name=ATCC64974_110060-T1|organism=Aspergillus niger N402|type=CDS|length=6036bp|location=Sequence derived from alignment at OGUI01000017.1:4529130..4530805- (Aspergillus niger N402)
ACCAGAAGGAATCCTCCCTTTACGATGCGGTCCTTGTAATGTACATCGAG
AAGGAGCTAGTACCTGATATCGGGGAGTTCAGTCAGCTTCTTCTCATTCA
TGCGCTATACCACCGTATGTGGGAAGTGGGAGACTACTTCCGCCGCCCCT
TGTCCTTCTGGAACCCAACCTCGAAAAAGCAGTCACGGCATTCTGCACTC
CCGTCTGGCTCCGTCTGGCTGCCTGGTATTCCATCTTATTCCAAGTGGCG
AAACAGTGCGTGTGACTGCCTGGATATACTCCATTGGGCTGCTGGCAGCA
CAGTAGCCAGGACCGCTGGCCTTGAACATCCCACAATCTTGCATCTCCAT
TTAGCCCGCATAATCCTCCTTGCTCCGTTTCGTGAAATACGGTCACTCGC
AACATCTTTGGCGATGGAAGAGTCCCGTTGGTGTGAACGTGAACAGACCC
TTGAATGGCACTATATACTACGCTGGGTCAAGCATGACCAGTACAAGGCT
CGCCTGGCAGTTGTACACGCCGGTGCAATGCTAAGACATGCACGCGATTT
CTCAAGTCGTTCTTTCCATGAGCCAGTCGCTGTCTTCCTGGCAACACTAG
TTCTGTGGGCATATGGCGCATGCTATACCTTCTTATCTGACATGACGAGC
CGCCATGAGGCAAGCCACGGCATGCCGGAAAAGCCTCTGTTCATTCACCT
CGACAGACCCTGCGATGATGAATTAGCCCAACTTTTCGTGCGCGAGGGCC
AAGGAATGAAAGCGGTTCTGACCGGCGTTGGGGATATATGTGCTCCGCGA
GGACCAGAGGAGACCCTCAAAGCTGGCTGCCTGATCCTTGCCGGCCTTTC
GTCGTGGGGGATCTCCAAACGATTTACCGCGATCTTGGGCAAGCTTTCTG
AAATAACATCCAAGTCGTAGCTTCTGGATTGCACAATAGCATACCATTTT
GACAGGCGCCCTCTGCTCTCTCTTGACGAAAGCCAAGCAACGCTGCCTTC
CCACGAGGCACTTTGGACGGCAAAATCTCTAGAGGCCTGGAAAGACGTAC
GGGGAAGGATGTCAGGAAGAGAAGTATTATGTCGATCGTGCACCCGTGTG
GCTTCTTCAAGCATCAGTACTCAATTGCGTTGGGATACTATACAGTTGTG
ATGAACGGGCTAGGCTTTTGGCGCTGAATACGTTTGGCAACTTGATAGGC
TTTGTGAACCGCGAGAAACTTCTTAGTCGTCCAGACAGACCCATACAACC
TCTAAACGGGAAGACGAACGAGCAGCACTGGGTGTCTTGGGTCGAGGACG
AGATCAGAAGACGCATAGGCTACCTGATTTGGATGCATTTCCAGCCTGTT
TACCCAATATTTCACACCCCTACATTTGATATCAACGAGTGCCATTGGCT
AGTGGTGCTAGCTCTCTCAGCAATAGGTTGCCATTTTGCTGGTTCCCAAG
AGCAAAGCGAGTGTGCGCCGGTGTTTCATGAGTTTCTTAGACGCGCTATA
AGTGTTGAGACCAGAAGGAATCCTCCCTTTACGATGCGGTCCTTGTAATG
TACATCGAGAAGGAGCTAGTACCTGATATCGGGGAGTTCAGTCAGCTTCT
TCTCATTCATGCGCTATACCACCGTATGTGGGAAGTGGGAGACTACTTCC
GCCGCCCCTTGTCCTTCTGGAACCCAACCTCGAAAAAGCAGTCACGGCAT
TCTGCACTCCCGTCTGGCTCCGTCTGGCTGCCTGGTATTCCATCTTATTC
CAAGTGGCGAAACAGTGCGTGTGACTGCCTGGATATACTCCATTGGGCTG
CTGGCAGCACAGTAGCCAGGACCGCTGGCCTTGAACATCCCACAATCTTG
CATCTCCATTTAGCCCGCATAATCCTCCTTGCTCCGTTTCGTGAAATACG
GTCACTCGCAACATCTTTGGCGATGGAAGAGTCCCGTTGGTGTGAACGTG
AACAGACCCTTGAATGGCACTATATACTACGCTGGGTCAAGCATGACCAG
TACAAGGCTCGCCTGGCAGTTGTACACGCCGGTGCAATGCTAAGACATGC
ACGCGATTTCTCAAGTCGTTCTTTCCATGAGCCAGTCGCTGTCTTCCTGG
CAACACTAGTTCTGTGGGCATATGGCGCATGCTATACCTTCTTATCTGAC
ATGACGAGCCGCCATGAGGCAAGCCACGGCATGCCGGAAAAGCCTCTGTT
CATTCACCTCGACAGACCCTGCGATGATGAATTAGCCCAACTTTTCGTGC
GCGAGGGCCAAGGAATGAAAGCGGTTCTGACCGGCGTTGGGGATATATGT
GCTCCGCGAGGACCAGAGGAGACCCTCAAAGCTGGCTGCCTGATCCTTGC
CGGCCTTTCGTCGTGGGGGATCTCCAAACGATTTACCGCGATCTTGGGCA
AGCTTTCTGAAATAACATCCAAGTCGTAGCTTCTGGATTGCACAATAGCA
TACCATTTTGACAGGCGCCCTCTGCTCTCTCTTGACGAAAGCCAAGCAAC
GCTGCCTTCCCACGAGGCACTTTGGACGGCAAAATCTCTAGAGGCCTGGA
AAGACGTACGGGGAAGGATGTCAGGAAGAGAAGTATTATGTCGATCGTGC
ACCCGTGTGGCTTCTTCAAGCATCAGTACTCAATTGCGTTGGGATACTAT
ACAGTTGTGATGAACGGGCTAGGCTTTTGGCGCTGAATACGTTTGGCAAC
TTGATAGGCTTTGTGAACCGCGAGAAACTTCTTAGTCGTCCAGACAGACC
CATACAACCTCTAAACGGGAAGACGAACGAGCAGCACTGGGTGTCTTGGG
TCGAGGACGAGATCAGAAGACGCATAGGCTACCTGATTTGGATGCATTTC
CAGCCTGTTTACCCAATATTTCACACCCCTACATTTGATATCAACGAGTG
CCATTGGCTAGTGGTGCTAGCTCTCTCAGCAATAGGTTGCCATTTTGCTG
GTTCCCAAGAGCAAAGCGAGTGTGCGCCGGTGTTTCATGAGTTTCTTAGA
CGCGCTATAAGTGTTGAGACCAGAAGGAATCCTCCCTTTACGATGCGGTC
CTTGTAATGTACATCGAGAAGGAGCTAGTACCTGATATCGGGGAGTTCAG
TCAGCTTCTTCTCATTCATGCGCTATACCACCGTATGTGGGAAGTGGGAG
ACTACTTCCGCCGCCCCTTGTCCTTCTGGAACCCAACCTCGAAAAAGCAG
TCACGGCATTCTGCACTCCCGTCTGGCTCCGTCTGGCTGCCTGGTATTCC
ATCTTATTCCAAGTGGCGAAACAGTGCGTGTGACTGCCTGGATATACTCC
ATTGGGCTGCTGGCAGCACAGTAGCCAGGACCGCTGGCCTTGAACATCCC
ACAATCTTGCATCTCCATTTAGCCCGCATAATCCTCCTTGCTCCGTTTCG
TGAAATACGGTCACTCGCAACATCTTTGGCGATGGAAGAGTCCCGTTGGT
GTGAACGTGAACAGACCCTTGAATGGCACTATATACTACGCTGGGTCAAG
CATGACCAGTACAAGGCTCGCCTGGCAGTTGTACACGCCGGTGCAATGCT
AAGACATGCACGCGATTTCTCAAGTCGTTCTTTCCATGAGCCAGTCGCTG
TCTTCCTGGCAACACTAGTTCTGTGGGCATATGGCGCATGCTATACCTTC
TTATCTGACATGACGAGCCGCCATGAGGCAAGCCACGGCATGCCGGAAAA
GCCTCTGTTCATTCACCTCGACAGACCCTGCGATGATGAATTAGCCCAAC
TTTTCGTGCGCGAGGGCCAAGGAATGAAAGCGGTTCTGACCGGCGTTGGG
GATATATGTGCTCCGCGAGGACCAGAGGAGACCCTCAAAGCTGGCTGCCT
GATCCTTGCCGGCCTTTCGTCGTGGGGGATCTCCAAACGATTTACCGCGA
TCTTGGGCAAGCTTTCTGAAATAACATCCAAGTCGTAGCTTCTGGATTGC
ACAATAGCATACCATTTTGACAGGCGCCCTCTGCTCTCTCTTGACGAAAG
CCAAGCAACGCTGCCTTCCCACGAGGCACTTTGGACGGCAAAATCTCTAG
AGGCCTGGAAAGACGTACGGGGAAGGATGTCAGGAAGAGAAGTATTATGT
CGATCGTGCACCCGTGTGGCTTCTTCAAGCATCAGTACTCAATTGCGTTG
GGATACTATACAGTTGTGATGAACGGGCTAGGCTTTTGGCGCTGAATACG
TTTGGCAACTTGATAGGCTTTGTGAACCGCGAGAAACTTCTTAGTCGTCC
AGACAGACCCATACAACCTCTAAACGGGAAGACGAACGAGCAGCACTGGG
TGTCTTGGGTCGAGGACGAGATCAGAAGACGCATAGGCTACCTGATTTGG
ATGCATTTCCAGCCTGTTTACCCAATATTTCACACCCCTACATTTGATAT
CAACGAGTGCCATTGGCTAGTGGTGCTAGCTCTCTCAGCAATAGGTTGCC
ATTTTGCTGGTTCCCAAGAGCAAAGCGAGTGTGCGCCGGTGTTTCATGAG
TTTCTTAGACGCGCTATAAGTGTTGAGACCAGAAGGAATCCTCCCTTTAC
GATGCGGTCCTTGTAATGTACATCGAGAAGGAGCTAGTACCTGATATCGG
GGAGTTCAGTCAGCTTCTTCTCATTCATGCGCTATACCACCGTATGTGGG
AAGTGGGAGACTACTTCCGCCGCCCCTTGTCCTTCTGGAACCCAACCTCG
AAAAAGCAGTCACGGCATTCTGCACTCCCGTCTGGCTCCGTCTGGCTGCC
TGGTATTCCATCTTATTCCAAGTGGCGAAACAGTGCGTGTGACTGCCTGG
ATATACTCCATTGGGCTGCTGGCAGCACAGTAGCCAGGACCGCTGGCCTT
GAACATCCCACAATCTTGCATCTCCATTTAGCCCGCATAATCCTCCTTGC
TCCGTTTCGTGAAATACGGTCACTCGCAACATCTTTGGCGATGGAAGAGT
CCCGTTGGTGTGAACGTGAACAGACCCTTGAATGGCACTATATACTACGC
TGGGTCAAGCATGACCAGTACAAGGCTCGCCTGGCAGTTGTACACGCCGG
TGCAATGCTAAGACATGCACGCGATTTCTCAAGTCGTTCTTTCCATGAGC
CAGTCGCTGTCTTCCTGGCAACACTAGTTCTGTGGGCATATGGCGCATGC
TATACCTTCTTATCTGACATGACGAGCCGCCATGAGGCAAGCCACGGCAT
GCCGGAAAAGCCTCTGTTCATTCACCTCGACAGACCCTGCGATGATGAAT
TAGCCCAACTTTTCGTGCGCGAGGGCCAAGGAATGAAAGCGGTTCTGACC
GGCGTTGGGGATATATGTGCTCCGCGAGGACCAGAGGAGACCCTCAAAGC
TGGCTGCCTGATCCTTGCCGGCCTTTCGTCGTGGGGGATCTCCAAACGAT
TTACCGCGATCTTGGGCAAGCTTTCTGAAATAACATCCAAGTCGTAGCTT
CTGGATTGCACAATAGCATACCATTTTGACAGGCGCCCTCTGCTCTCTCT
TGACGAAAGCCAAGCAACGCTGCCTTCCCACGAGGCACTTTGGACGGCAA
AATCTCTAGAGGCCTGGAAAGACGTACGGGGAAGGATGTCAGGAAGAGAA
GTATTATGTCGATCGTGCACCCGTGTGGCTTCTTCAAGCATCAGTACTCA
ATTGCGTTGGGATACTATACAGTTGTGATGAACGGGCTAGGCTTTTGGCG
CTGAATACGTTTGGCAACTTGATAGGCTTTGTGAACCGCGAGAAACTTCT
TAGTCGTCCAGACAGACCCATACAACCTCTAAACGGGAAGACGAACGAGC
AGCACTGGGTGTCTTGGGTCGAGGACGAGATCAGAAGACGCATAGGCTAC
CTGATTTGGATGCATTTCCAGCCTGTTTACCCAATATTTCACACCCCTAC
ATTTGATATCAACGAGTGCCATTGGCTAGTGGTGCTAGCTCTCTCAGCAA
TAGGTTGCCATTTTGCTGGTTCCCAAGAGCAAAGCGAGTGTGCGCCGGTG
TTTCATGAGTTTCTTAGACGCGCTATAAGTGTTGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_110060ATCC64974_110060Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110060-T1ATCC64974_110060-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110060-T1.cdsATCC64974_110060-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110060-T1.exon4ATCC64974_110060-T1.exon4Aspergillus niger N402exon
ATCC64974_110060-T1.exon3ATCC64974_110060-T1.exon3Aspergillus niger N402exon
ATCC64974_110060-T1.exon2ATCC64974_110060-T1.exon2Aspergillus niger N402exon
ATCC64974_110060-T1.exon1ATCC64974_110060-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4529130..4530805 -
Powered by Drupal