You are here

Home

ATCC64974_110670-T1, ATCC64974_110670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_110670-T1
Unique NameATCC64974_110670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4713453..4714944-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_110670-T1 ID=ATCC64974_110670-T1|Name=ATCC64974_110670-T1|organism=Aspergillus niger N402|type=mRNA|length=1492bp|location=Sequence derived from alignment at OGUI01000017.1:4713453..4714944- (Aspergillus niger N402)
ATGTTGCTGCGAATATGGCACATCTTGTATACCTTCATCGTAGTCGTGCA
GGCCATTGACTACGATGTCGACGATCCAGGTACTGTCCTTACCACCTTAA
TACACAACCCCATTACCTACCTACGTACCTGAACGAACCAGCTAACTAAC
CTGAATAGACTCTATCAAAGCAGCCTGCCACTCCGTCGCCCGCCAAATGC
TAACCCACTACACGGGCAACCAACCCGGCGACAACCCGGGCAACCTTCCC
GACCCCTACTACTGGTGGGAAGCCGGCGCCATGTTCACAGCGCTAGTCGA
CTACTGGTACCTCACCTCCGACGACACATGGAACAACATAACGACACAAG
GCATAACCTGGCAAGCCGGGCCCAGCGGCTCCTTCATGCCAGCGAACCAA
ACCCGCACCGAGGGCAACGACGACCAATCCTTTTGGGCTTTCGCAGCCAT
GTCCGCCGCAGAGCGAAATTTCCCAGACCCGCCTCCATCCTCCGGAAGCC
CAGGGTGGCTCGCCATGGCGCAAGCCGTATTCAACACTCAAGCTGCGCGG
TGGGACAAGAGTACCTGTAACGGCGGGCTACGATGGCAGATATTCACGTT
CAACAATGGCTGGACGTATAAGAATACCATCTCGAACGGATGTTTTTTCA
ATCTTGCTGCTAGGCTGGCCAAGTATACAGGGAATAGCACGTATGCGGAC
TGGGCGGATACAGTGTGGGACTGGACGGGCGAGGTAGGGTTCATGACGGA
TACGTATCGGTTTTGGGATGGGGCGGATGTGAGCAGTGGGTGTGGGGATT
GGAATTATATTGAGTGGACGTATAATACGGGCGTTTATCTGCTGGGGGCG
GCGGTTATGTATAATTTGGTGGGTTTCTTTCTCCCCTGATTGTGATTATT
GGTGGGAGGTGGCTAATGGTGACAGACTGAATCGCCCGTCTGGAAAGCCC
GAACAGAAGGCATTCTCAACGCCAGCTTCGTCTTCTTCCAAGACGATGTC
ATGTATGAGCGGGCATGTGAACCTGTGAGCACATGCCAGGTCGATCAGCG
CTCCTTCAAGGGATACTTGGCGCGCTGGATGGCCGCGACAACGCAAATGG
CGCCGTTCACGTATGACCTGGTGATGCCGAAGCTGAGGGCGTCGGCCAAG
GCGGCGGCGGAGACATGCACAGGGGGTGAACTCCAGGCGACGTGCGGGTT
GAAGTGGACGGATCGGAAGTGGGATGGAATGGATGATGTGGGGATCCAGA
TGGCGGCGCTGGAGGTGATGCAGTCGACGTTGATCAGTAGGGTTGATCCT
CCTGTCACGCAGGACACAGGCGGCACGAGTCAGGGCAATCCGGCGGGTGG
AGAGCCAGGACCCCCGCCGGCGCCGGTGCCGGAGGGACTGAGGTTGGAGA
TCACGAAGGCGGATCGGGCGGGGGCAGGGATGATGACGGTGATGCTTTCG
ATGATAGTTATTGGGTCCACGGGATGGATGGTTTACGAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4713453..4714944-

>ATCC64974_110670-T1 ID=ATCC64974_110670-T1|Name=ATCC64974_110670-T1|organism=Aspergillus niger N402|type=CDS|length=4068bp|location=Sequence derived from alignment at OGUI01000017.1:4713453..4714944- (Aspergillus niger N402)
ACTGAATCGCCCGTCTGGAAAGCCCGAACAGAAGGCATTCTCAACGCCAG
CTTCGTCTTCTTCCAAGACGATGTCATGTATGAGCGGGCATGTGAACCTG
TGAGCACATGCCAGGTCGATCAGCGCTCCTTCAAGGGATACTTGGCGCGC
TGGATGGCCGCGACAACGCAAATGGCGCCGTTCACGTATGACCTGGTGAT
GCCGAAGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGACATGCACAGGGG
GTGAACTCCAGGCGACGTGCGGGTTGAAGTGGACGGATCGGAAGTGGGAT
GGAATGGATGATGTGGGGATCCAGATGGCGGCGCTGGAGGTGATGCAGTC
GACGTTGATCAGTAGGGTTGATCCTCCTGTCACGCAGGACACAGGCGGCA
CGAGTCAGGGCAATCCGGCGGGTGGAGAGCCAGGACCCCCGCCGGCGCCG
GTGCCGGAGGGACTGAGGTTGGAGATCACGAAGGCGGATCGGGCGGGGGC
AGGGATGATGACGGTGATGCTTTCGATGATAGTTATTGGGTCCACGGGAT
GGATGGTTTACGAGTAAACTCTATCAAAGCAGCCTGCCACTCCGTCGCCC
GCCAAATGCTAACCCACTACACGGGCAACCAACCCGGCGACAACCCGGGC
AACCTTCCCGACCCCTACTACTGGTGGGAAGCCGGCGCCATGTTCACAGC
GCTAGTCGACTACTGGTACCTCACCTCCGACGACACATGGAACAACATAA
CGACACAAGGCATAACCTGGCAAGCCGGGCCCAGCGGCTCCTTCATGCCA
GCGAACCAAACCCGCACCGAGGGCAACGACGACCAATCCTTTTGGGCTTT
CGCAGCCATGTCCGCCGCAGAGCGAAATTTCCCAGACCCGCCTCCATCCT
CCGGAAGCCCAGGGTGGCTCGCCATGGCGCAAGCCGTATTCAACACTCAA
GCTGCGCGGTGGGACAAGAGTACCTGTAACGGCGGGCTACGATGGCAGAT
ATTCACGTTCAACAATGGCTGGACGTATAAGAATACCATCTCGAACGGAT
GTTTTTTCAATCTTGCTGCTAGGCTGGCCAAGTATACAGGGAATAGCACG
TATGCGGACTGGGCGGATACAGTGTGGGACTGGACGGGCGAGGTAGGGTT
CATGACGGATACGTATCGGTTTTGGGATGGGGCGGATGTGAGCAGTGGGT
GTGGGGATTGGAATTATATTGAGTGGACGTATAATACGGGCGTTTATCTG
CTGGGGGCGGCGGTTATGTATAATTTGATGTTGCTGCGAATATGGCACAT
CTTGTATACCTTCATCGTAGTCGTGCAGGCCATTGACTACGATGTCGACG
ATCCAGACTGAATCGCCCGTCTGGAAAGCCCGAACAGAAGGCATTCTCAA
CGCCAGCTTCGTCTTCTTCCAAGACGATGTCATGTATGAGCGGGCATGTG
AACCTGTGAGCACATGCCAGGTCGATCAGCGCTCCTTCAAGGGATACTTG
GCGCGCTGGATGGCCGCGACAACGCAAATGGCGCCGTTCACGTATGACCT
GGTGATGCCGAAGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGACATGCA
CAGGGGGTGAACTCCAGGCGACGTGCGGGTTGAAGTGGACGGATCGGAAG
TGGGATGGAATGGATGATGTGGGGATCCAGATGGCGGCGCTGGAGGTGAT
GCAGTCGACGTTGATCAGTAGGGTTGATCCTCCTGTCACGCAGGACACAG
GCGGCACGAGTCAGGGCAATCCGGCGGGTGGAGAGCCAGGACCCCCGCCG
GCGCCGGTGCCGGAGGGACTGAGGTTGGAGATCACGAAGGCGGATCGGGC
GGGGGCAGGGATGATGACGGTGATGCTTTCGATGATAGTTATTGGGTCCA
CGGGATGGATGGTTTACGAGTAAACTCTATCAAAGCAGCCTGCCACTCCG
TCGCCCGCCAAATGCTAACCCACTACACGGGCAACCAACCCGGCGACAAC
CCGGGCAACCTTCCCGACCCCTACTACTGGTGGGAAGCCGGCGCCATGTT
CACAGCGCTAGTCGACTACTGGTACCTCACCTCCGACGACACATGGAACA
ACATAACGACACAAGGCATAACCTGGCAAGCCGGGCCCAGCGGCTCCTTC
ATGCCAGCGAACCAAACCCGCACCGAGGGCAACGACGACCAATCCTTTTG
GGCTTTCGCAGCCATGTCCGCCGCAGAGCGAAATTTCCCAGACCCGCCTC
CATCCTCCGGAAGCCCAGGGTGGCTCGCCATGGCGCAAGCCGTATTCAAC
ACTCAAGCTGCGCGGTGGGACAAGAGTACCTGTAACGGCGGGCTACGATG
GCAGATATTCACGTTCAACAATGGCTGGACGTATAAGAATACCATCTCGA
ACGGATGTTTTTTCAATCTTGCTGCTAGGCTGGCCAAGTATACAGGGAAT
AGCACGTATGCGGACTGGGCGGATACAGTGTGGGACTGGACGGGCGAGGT
AGGGTTCATGACGGATACGTATCGGTTTTGGGATGGGGCGGATGTGAGCA
GTGGGTGTGGGGATTGGAATTATATTGAGTGGACGTATAATACGGGCGTT
TATCTGCTGGGGGCGGCGGTTATGTATAATTTGATGTTGCTGCGAATATG
GCACATCTTGTATACCTTCATCGTAGTCGTGCAGGCCATTGACTACGATG
TCGACGATCCAGACTGAATCGCCCGTCTGGAAAGCCCGAACAGAAGGCAT
TCTCAACGCCAGCTTCGTCTTCTTCCAAGACGATGTCATGTATGAGCGGG
CATGTGAACCTGTGAGCACATGCCAGGTCGATCAGCGCTCCTTCAAGGGA
TACTTGGCGCGCTGGATGGCCGCGACAACGCAAATGGCGCCGTTCACGTA
TGACCTGGTGATGCCGAAGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGA
CATGCACAGGGGGTGAACTCCAGGCGACGTGCGGGTTGAAGTGGACGGAT
CGGAAGTGGGATGGAATGGATGATGTGGGGATCCAGATGGCGGCGCTGGA
GGTGATGCAGTCGACGTTGATCAGTAGGGTTGATCCTCCTGTCACGCAGG
ACACAGGCGGCACGAGTCAGGGCAATCCGGCGGGTGGAGAGCCAGGACCC
CCGCCGGCGCCGGTGCCGGAGGGACTGAGGTTGGAGATCACGAAGGCGGA
TCGGGCGGGGGCAGGGATGATGACGGTGATGCTTTCGATGATAGTTATTG
GGTCCACGGGATGGATGGTTTACGAGTAAACTCTATCAAAGCAGCCTGCC
ACTCCGTCGCCCGCCAAATGCTAACCCACTACACGGGCAACCAACCCGGC
GACAACCCGGGCAACCTTCCCGACCCCTACTACTGGTGGGAAGCCGGCGC
CATGTTCACAGCGCTAGTCGACTACTGGTACCTCACCTCCGACGACACAT
GGAACAACATAACGACACAAGGCATAACCTGGCAAGCCGGGCCCAGCGGC
TCCTTCATGCCAGCGAACCAAACCCGCACCGAGGGCAACGACGACCAATC
CTTTTGGGCTTTCGCAGCCATGTCCGCCGCAGAGCGAAATTTCCCAGACC
CGCCTCCATCCTCCGGAAGCCCAGGGTGGCTCGCCATGGCGCAAGCCGTA
TTCAACACTCAAGCTGCGCGGTGGGACAAGAGTACCTGTAACGGCGGGCT
ACGATGGCAGATATTCACGTTCAACAATGGCTGGACGTATAAGAATACCA
TCTCGAACGGATGTTTTTTCAATCTTGCTGCTAGGCTGGCCAAGTATACA
GGGAATAGCACGTATGCGGACTGGGCGGATACAGTGTGGGACTGGACGGG
CGAGGTAGGGTTCATGACGGATACGTATCGGTTTTGGGATGGGGCGGATG
TGAGCAGTGGGTGTGGGGATTGGAATTATATTGAGTGGACGTATAATACG
GGCGTTTATCTGCTGGGGGCGGCGGTTATGTATAATTTGATGTTGCTGCG
AATATGGCACATCTTGTATACCTTCATCGTAGTCGTGCAGGCCATTGACT
ACGATGTCGACGATCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_110670ATCC64974_110670Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110670-T1ATCC64974_110670-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110670-T1.cdsATCC64974_110670-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_110670-T1.exon3ATCC64974_110670-T1.exon3Aspergillus niger N402exon
ATCC64974_110670-T1.exon2ATCC64974_110670-T1.exon2Aspergillus niger N402exon
ATCC64974_110670-T1.exon1ATCC64974_110670-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH76
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR005198
DBxrefInterPro:IPR014480
DBxrefPFAM:PF03663
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4713453..4714944 -
Powered by Drupal