You are here

Home

ATCC64974_11390-T1, ATCC64974_11390-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_11390-T1
Unique NameATCC64974_11390-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:37797..39586+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_11390-T1 ID=ATCC64974_11390-T1|Name=ATCC64974_11390-T1|organism=Aspergillus niger N402|type=mRNA|length=1790bp|location=Sequence derived from alignment at OGUI01000003.1:37797..39586+ (Aspergillus niger N402)
ATGTCTGACACCGCGCGGATCTCAGGCGGTTCATTCACGTCTCCTCTGGG
CAGAGACGTGGAATTAAATAGCTTCAAGGAAGCCTCTCAGACACGTTTGT
ACCCCTACAGTTCCAGGAAGGAGGAAGAGGGACGGGAGGATGAGCAACAA
CGGCCTGAGCGGGAAGAGGACACCGGCGCTCTAACAGGCTACAAGCTGGT
ATTGGTTACCGTCGGGCTCTGCTTCTGCATATTCTGTACCTCGCTCGACA
ATACCATCGTCGCCACTGCGGTTCCGAGAATCACCCAGCAGTTCCACTCT
CTGGATGATGTGGGGTGGTATGCCAGTGCCTACCTGCTCACAACTTGCGC
CGTGACCCTCCCCTTCGGGCGCCTCTACACCTTCTTCCCCATTAAATGGG
TCTATCTCAGTGCCTTGTTTGTCTTTGAACTTGGTTCCTTCATCTGCGGC
ATCACCCCTTCCTCGCTGGGTCTCATCTTGGGCCGCGCTGTGGCCGGCCT
GGGGGGAGGGGGGCTGTTCTCAGGTTCGCTCCTCATCATTACTCAATGCG
TGCCTTTGCGGCGAAGGCCGGCTTTCTCCGGGTTCATCATGAGCATCTTC
GCGGTGGCGAGCGTGATTGCACCTCTGTAAGCCTGTGGTCCTAAATGTAC
ATGCGGTTGCAAGACCGACATGAGCTCTTTATACCCGTGAGCTAACCTCT
TGGCTTGCCGTTTCTTAGGATGGGCGGAGCATTCACAGACCACATCTCGT
GGCGCTGGTGTTTTTATATCAATCTTCCGTTCGGCCTCGTCAGTGCTGTT
GTCATCTTCTTCACGTTCCAGACCACCAAGCCAGTGGTACAGGCAAGCCT
GCGAGAAAAGGCGGCTGGCCTTGATCCCCTGGGGACGGCCACCTTCCTGC
CAGCCATTGTGTGCCTCCTGCTAGCGACTCAATGGGGTGGTGCCCAATAC
CCCTGGGGCGATGGCCGCATAATCGCGCTGTTTACTCTCTTCGGGGTCCT
ACTTGCGTGCTTTGTAGGGCTACAGCTTTGGGCCCGCGAGCGAGCCACCC
TCCCACCGCGCCTTCTACGGGGCCGCAACATCTGGGGTTCTGCGTTGTAC
GGCTTCTGTCTCAATGGTGCCATGTTTACCTTTGTCTACTACCTCCCCAT
ATGGTTCCAAGCTGTTCAGGGGACCTCTGCCACGGAGTCGGGCATACGGA
ACCTGCCGCTCGTCATATCCAACGTGATATTCGCCATCATCTCTGGCGTG
CTGGTGAGCGCGACCGGTTACTTTGGCCCTTTCATGCTCCTGAGCGCGGC
TATGGCTAGTATCGCCGCTGGGCTGCTCTCGATGTTGCATCCAAGTTCCG
GGGCAGGTGAATGGATCGGATACCAGGTGCTTCTGGGATCGAGCATCGGC
ATGGGCTTCCAGCTGCCTGTATTCGTCGTTCAGACCACCCTGGCCTCCAC
TGATATCCCCACCGCCACCGCTCTGATGACTTTCATTCAGCTCCTTGGCG
GTGCTATCTTCGTCTCTGTCGCGCAGAATGTGTTTCGCAATCAGTTAGCT
GCCGACATCCGCGCGGCCTTGCCGATGCTGGACCCTAAGGCAGTGATTAA
TGCCGGTCCTACCAGTCTGAGGGCAATGTACTCGGGGGAGACTCTTACAA
CTCTAGTTGCTATGTATAATGATGCCGTAGTGCACACCTTCTACCTTGCC
ATTGGCTTAGCTGCTGCCTCCTTCCTCGCCGCAACGGTCATCCAGTGGCG
GCCCTCGCCGAAATCAATCAGCCACCCCGACTCTTCCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:37797..39586+

>ATCC64974_11390-T1 ID=ATCC64974_11390-T1|Name=ATCC64974_11390-T1|organism=Aspergillus niger N402|type=CDS|length=3396bp|location=Sequence derived from alignment at OGUI01000003.1:37797..39586+ (Aspergillus niger N402)
ATGTCTGACACCGCGCGGATCTCAGGCGGTTCATTCACGTCTCCTCTGGG
CAGAGACGTGGAATTAAATAGCTTCAAGGAAGCCTCTCAGACACGTTTGT
ACCCCTACAGTTCCAGGAAGGAGGAAGAGGGACGGGAGGATGAGCAACAA
CGGCCTGAGCGGGAAGAGGACACCGGCGCTCTAACAGGCTACAAGCTGGT
ATTGGTTACCGTCGGGCTCTGCTTCTGCATATTCTGTACCTCGCTCGACA
ATACCATCGTCGCCACTGCGGTTCCGAGAATCACCCAGCAGTTCCACTCT
CTGGATGATGTGGGGTGGTATGCCAGTGCCTACCTGCTCACAACTTGCGC
CGTGACCCTCCCCTTCGGGCGCCTCTACACCTTCTTCCCCATTAAATGGG
TCTATCTCAGTGCCTTGTTTGTCTTTGAACTTGGTTCCTTCATCTGCGGC
ATCACCCCTTCCTCGCTGGGTCTCATCTTGGGCCGCGCTGTGGCCGGCCT
GGGGGGAGGGGGGCTGTTCTCAGGTTCGCTCCTCATCATTACTCAATGCG
TGCCTTTGCGGCGAAGGCCGGCTTTCTCCGGGTTCATCATGAGCATCTTC
GCGGTGGCGAGCGTGATTGCACCTCTGATGGGCGGAGCATTCACAGACCA
CATCTCGTGGCGCTGGTGTTTTTATATCAATCTTCCGTTCGGCCTCGTCA
GTGCTGTTGTCATCTTCTTCACGTTCCAGACCACCAAGCCAGTGGTACAG
GCAAGCCTGCGAGAAAAGGCGGCTGGCCTTGATCCCCTGGGGACGGCCAC
CTTCCTGCCAGCCATTGTGTGCCTCCTGCTAGCGACTCAATGGGGTGGTG
CCCAATACCCCTGGGGCGATGGCCGCATAATCGCGCTGTTTACTCTCTTC
GGGGTCCTACTTGCGTGCTTTGTAGGGCTACAGCTTTGGGCCCGCGAGCG
AGCCACCCTCCCACCGCGCCTTCTACGGGGCCGCAACATCTGGGGTTCTG
CGTTGTACGGCTTCTGTCTCAATGGTGCCATGTTTACCTTTGTCTACTAC
CTCCCCATATGGTTCCAAGCTGTTCAGGGGACCTCTGCCACGGAGTCGGG
CATACGGAACCTGCCGCTCGTCATATCCAACGTGATATTCGCCATCATCT
CTGGCGTGCTGGTGAGCGCGACCGGTTACTTTGGCCCTTTCATGCTCCTG
AGCGCGGCTATGGCTAGTATCGCCGCTGGGCTGCTCTCGATGTTGCATCC
AAGTTCCGGGGCAGGTGAATGGATCGGATACCAGGTGCTTCTGGGATCGA
GCATCGGCATGGGCTTCCAGCTGCCTGTATTCGTCGTTCAGACCACCCTG
GCCTCCACTGATATCCCCACCGCCACCGCTCTGATGACTTTCATTCAGCT
CCTTGGCGGTGCTATCTTCGTCTCTGTCGCGCAGAATGTGTTTCGCAATC
AGTTAGCTGCCGACATCCGCGCGGCCTTGCCGATGCTGGACCCTAAGGCA
GTGATTAATGCCGGTCCTACCAGTCTGAGGGCAATGTACTCGGGGGAGAC
TCTTACAACTCTAGTTGCTATGTATAATGATGCCGTAGTGCACACCTTCT
ACCTTGCCATTGGCTTAGCTGCTGCCTCCTTCCTCGCCGCAACGGTCATC
CAGTGGCGGCCCTCGCCGAAATCAATCAGCCACCCCGACTCTTCCTGAAT
GTCTGACACCGCGCGGATCTCAGGCGGTTCATTCACGTCTCCTCTGGGCA
GAGACGTGGAATTAAATAGCTTCAAGGAAGCCTCTCAGACACGTTTGTAC
CCCTACAGTTCCAGGAAGGAGGAAGAGGGACGGGAGGATGAGCAACAACG
GCCTGAGCGGGAAGAGGACACCGGCGCTCTAACAGGCTACAAGCTGGTAT
TGGTTACCGTCGGGCTCTGCTTCTGCATATTCTGTACCTCGCTCGACAAT
ACCATCGTCGCCACTGCGGTTCCGAGAATCACCCAGCAGTTCCACTCTCT
GGATGATGTGGGGTGGTATGCCAGTGCCTACCTGCTCACAACTTGCGCCG
TGACCCTCCCCTTCGGGCGCCTCTACACCTTCTTCCCCATTAAATGGGTC
TATCTCAGTGCCTTGTTTGTCTTTGAACTTGGTTCCTTCATCTGCGGCAT
CACCCCTTCCTCGCTGGGTCTCATCTTGGGCCGCGCTGTGGCCGGCCTGG
GGGGAGGGGGGCTGTTCTCAGGTTCGCTCCTCATCATTACTCAATGCGTG
CCTTTGCGGCGAAGGCCGGCTTTCTCCGGGTTCATCATGAGCATCTTCGC
GGTGGCGAGCGTGATTGCACCTCTGATGGGCGGAGCATTCACAGACCACA
TCTCGTGGCGCTGGTGTTTTTATATCAATCTTCCGTTCGGCCTCGTCAGT
GCTGTTGTCATCTTCTTCACGTTCCAGACCACCAAGCCAGTGGTACAGGC
AAGCCTGCGAGAAAAGGCGGCTGGCCTTGATCCCCTGGGGACGGCCACCT
TCCTGCCAGCCATTGTGTGCCTCCTGCTAGCGACTCAATGGGGTGGTGCC
CAATACCCCTGGGGCGATGGCCGCATAATCGCGCTGTTTACTCTCTTCGG
GGTCCTACTTGCGTGCTTTGTAGGGCTACAGCTTTGGGCCCGCGAGCGAG
CCACCCTCCCACCGCGCCTTCTACGGGGCCGCAACATCTGGGGTTCTGCG
TTGTACGGCTTCTGTCTCAATGGTGCCATGTTTACCTTTGTCTACTACCT
CCCCATATGGTTCCAAGCTGTTCAGGGGACCTCTGCCACGGAGTCGGGCA
TACGGAACCTGCCGCTCGTCATATCCAACGTGATATTCGCCATCATCTCT
GGCGTGCTGGTGAGCGCGACCGGTTACTTTGGCCCTTTCATGCTCCTGAG
CGCGGCTATGGCTAGTATCGCCGCTGGGCTGCTCTCGATGTTGCATCCAA
GTTCCGGGGCAGGTGAATGGATCGGATACCAGGTGCTTCTGGGATCGAGC
ATCGGCATGGGCTTCCAGCTGCCTGTATTCGTCGTTCAGACCACCCTGGC
CTCCACTGATATCCCCACCGCCACCGCTCTGATGACTTTCATTCAGCTCC
TTGGCGGTGCTATCTTCGTCTCTGTCGCGCAGAATGTGTTTCGCAATCAG
TTAGCTGCCGACATCCGCGCGGCCTTGCCGATGCTGGACCCTAAGGCAGT
GATTAATGCCGGTCCTACCAGTCTGAGGGCAATGTACTCGGGGGAGACTC
TTACAACTCTAGTTGCTATGTATAATGATGCCGTAGTGCACACCTTCTAC
CTTGCCATTGGCTTAGCTGCTGCCTCCTTCCTCGCCGCAACGGTCATCCA
GTGGCGGCCCTCGCCGAAATCAATCAGCCACCCCGACTCTTCCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005887integral component of plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_11390ATCC64974_11390Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11390-T1.exon1ATCC64974_11390-T1.exon1Aspergillus niger N402exon
ATCC64974_11390-T1.exon2ATCC64974_11390-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11390-T1.cdsATCC64974_11390-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_11390-T1ATCC64974_11390-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:37797..39586 +
Powered by Drupal