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ATCC64974_12060-T1, ATCC64974_12060-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_12060-T1
Unique NameATCC64974_12060-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:230329..232216+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_12060-T1 ID=ATCC64974_12060-T1|Name=ATCC64974_12060-T1|organism=Aspergillus niger N402|type=mRNA|length=1888bp|location=Sequence derived from alignment at OGUI01000003.1:230329..232216+ (Aspergillus niger N402)
ATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCC
ATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAA
CTGACAGTAACGAACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGC
AAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGG
AGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAA
GCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGG
TCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTA
CCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATC
GCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGAT
AGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGA
GAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCG
TTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTT
GAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAG
TGGACGGTCTAAAGGGTGAGTTCCCTGCGTTTCCATATGACAGGAGAGCT
GTGTACTAACTTTCACTAGTGTCGGTTATGTCGAGTTCAAAAGCGAAGAC
TCCGTTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCTAGGAATTCC
CATAATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGGCCCGCAATC
CCGAGGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCACAGGTTGTAC
GTGGGTAACATTCATTTCAGCATCACTGAAAGTGACCTTCAGAACGTCTT
TGAGCCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGGATGAGACTG
GTCGTAGCAGGGGTTATGGATTCGTGCAGTGAGTGTTACCCCTATACAAT
TTCCCTTCATGATTAGTAACTGTTGCTAATACCGTGTATAGGTTCCGTGA
TCCAAACCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGATTTGACCTTG
CTGGTCGAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTCACTCCTGAC
TCGAACGCACAACGCATGCAGAGCCAAGGTGCAAACCAACATAACTTCCA
GGGCTCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAGCCGGCGGTA
CCAGCAACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAGGGGGCCGGC
GCTAGTGCATTGGACGATACGGATGTTGCCGGCGTAAATTTCAACAACTA
CAGTAGGGATGCATTGATGCGCAAGCTTGCAAGAACAGATGAACCATCCG
AGCCTGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAGACTGAGGCT
AAGCCTCTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGTCATGCTCCG
CAACATGTTTGACCCCAACGAGTAAGTTGCTCAATCATAGCTATCTGTCT
TCTCTATACAGAATCTAACAATATCGCAGGGAGGAGGGTGAAGCTTGGAT
TAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGAAGACAAATATGGCC
ATGTTGTTCACATTGCACTAGATCCCAACTCGCAAGGCGATATTTACCTG
AAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATCAAGGGCCTGAACGG
GCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCCCGTCGTCGACGCTG
TCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:230329..232216+

>ATCC64974_12060-T1 ID=ATCC64974_12060-T1|Name=ATCC64974_12060-T1|organism=Aspergillus niger N402|type=CDS|length=6852bp|location=Sequence derived from alignment at OGUI01000003.1:230329..232216+ (Aspergillus niger N402)
ATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCC
ATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAA
CTGACAGTAACGAACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGC
AAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGG
AGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAA
GCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGG
TCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTA
CCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATC
GCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGAT
AGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGA
GAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCG
TTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTT
GAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAG
TGGACGGTCTAAAGGTGTCGGTTATGTCGAGTTCAAAAGCGAAGACTCCG
TTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCTAGGAATTCCCATA
ATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGGCCCGCAATCCCGA
GGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCACAGGTTGTACGTGG
GTAACATTCATTTCAGCATCACTGAAAGTGACCTTCAGAACGTCTTTGAG
CCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGGATGAGACTGGTCG
TAGCAGGGGTTATGGATTCGTGCAGTTCCGTGATCCAAACCAGGCTCGTG
AGGCTTTGGAAAAGATGAATGGATTTGACCTTGCTGGTCGAGCAATCCGC
GTTGGCCTTGGCAACGATAAGTTCACTCCTGACTCGAACGCACAACGCAT
GCAGAGCCAAGGTGCAAACCAACATAACTTCCAGGGCTCTCTCTTCTCGG
GTCACGGAGGACGTGGTGTTCAAGCCGGCGGTACCAGCAACTTCGACCGC
GCTGGTGGCCGTGACTCCGAAAAGGGGGCCGGCGCTAGTGCATTGGACGA
TACGGATGTTGCCGGCGTAAATTTCAACAACTACAGTAGGGATGCATTGA
TGCGCAAGCTTGCAAGAACAGATGAACCATCCGAGCCTGCTGCCGATGAC
CAGCAGAAGGTGCTCCGTCCCAAGACTGAGGCTAAGCCTCTGCCTGTTAA
CGTCAACATGGCAAGTCGGTGTGTCATGCTCCGCAACATGTTTGACCCCA
ACGAGGAGGAGGGTGAAGCTTGGATTAAGGAGCTGGAGGATGACGTTCGC
GCTGAGTGCGAAGACAAATATGGCCATGTTGTTCACATTGCACTAGATCC
CAACTCGCAAGGCGATATTTACCTGAAGTTCGACCGCGTCCAGGGTGGCG
AGAACGCCATCAAGGGCCTGAACGGGCGTTTCTTTGGTGGTCGACAGATC
ACCGCCCAGCCCGTCGTCGACGCTGTCTACAGCAGTCTGTTCTCCCGAAC
CAAAGCGATCTAAATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCA
CAGCTGCTCCGCCATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGAC
CGCTCCTCCAAAACTGACAGTAACGAACGCCGGGACCGTGATCGGTCACG
AGAGAAGGACCGCAAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGC
GAGATATCGATGGAGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGC
AGTGCTAACGGAAGCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAG
CGAACGCCGTCGGTCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTG
GTGGCGACTTCTACCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCG
CCTTACGATGATCGCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGA
GCGAGATGAAGATAGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCC
CGAGAAGCCGCGAGAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGG
CGTACCATTTTCGTTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCT
GATTGCGTTCTTTGAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTA
AGGACCGTGTCAGTGGACGGTCTAAAGGTGTCGGTTATGTCGAGTTCAAA
AGCGAAGACTCCGTTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCT
AGGAATTCCCATAATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGG
CCCGCAATCCCGAGGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCAC
AGGTTGTACGTGGGTAACATTCATTTCAGCATCACTGAAAGTGACCTTCA
GAACGTCTTTGAGCCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGG
ATGAGACTGGTCGTAGCAGGGGTTATGGATTCGTGCAGTTCCGTGATCCA
AACCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGATTTGACCTTGCTGG
TCGAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTCACTCCTGACTCGA
ACGCACAACGCATGCAGAGCCAAGGTGCAAACCAACATAACTTCCAGGGC
TCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAGCCGGCGGTACCAG
CAACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAGGGGGCCGGCGCTA
GTGCATTGGACGATACGGATGTTGCCGGCGTAAATTTCAACAACTACAGT
AGGGATGCATTGATGCGCAAGCTTGCAAGAACAGATGAACCATCCGAGCC
TGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAGACTGAGGCTAAGC
CTCTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGTCATGCTCCGCAAC
ATGTTTGACCCCAACGAGGAGGAGGGTGAAGCTTGGATTAAGGAGCTGGA
GGATGACGTTCGCGCTGAGTGCGAAGACAAATATGGCCATGTTGTTCACA
TTGCACTAGATCCCAACTCGCAAGGCGATATTTACCTGAAGTTCGACCGC
GTCCAGGGTGGCGAGAACGCCATCAAGGGCCTGAACGGGCGTTTCTTTGG
TGGTCGACAGATCACCGCCCAGCCCGTCGTCGACGCTGTCTACAGCAGTC
TGTTCTCCCGAACCAAAGCGATCTAAATGTCAGGTCTCGATGTTGAGGCT
CTCCTTGAGTCCACAGCTGCTCCGCCATCTCAAGACCCTCCCCGTTCCCA
GGACCGCGATGACCGCTCCTCCAAAACTGACAGTAACGAACGCCGGGACC
GTGATCGGTCACGAGAGAAGGACCGCAAGCGCAGGGACCGCAGCCGTGAT
CGACGTCGCTCGCGAGATATCGATGGAGATGAAGACATGAAGAGCCCGAG
AAGCGAACATGGCAGTGCTAACGGAAGCCATAGAAGCAGAAAGAGGAGCA
GGAGTCGTGATAGCGAACGCCGTCGGTCTCGTCGTGACCGTTACGGTGAC
GAATACCGTTCTGGTGGCGACTTCTACCGCGGTGGTGGACGGGCTCGCAC
TCGCTCTCGGTCGCCTTACGATGATCGCTATTACCGCCCCTCGGGCCGCT
CCCGTCGCGATGAGCGAGATGAAGATAGACGCACTCGCCGTGACCGCAAA
CGAAGCCCGAGCCCGAGAAGCCGCGAGAGGACCCCGGAGCCTACTGAGGA
TGAGCGTGACAGGCGTACCATTTTCGTTCAGCAGCTTGCTGCGCGGTTGA
GAACTAAGGAGCTGATTGCGTTCTTTGAGAAAGTCGGACCTGTCAAGGAA
GCCCAGATCGTTAAGGACCGTGTCAGTGGACGGTCTAAAGGTGTCGGTTA
TGTCGAGTTCAAAAGCGAAGACTCCGTTGCGCCCGCTATCCAGCTTACCG
GACAGAAACTTCTAGGAATTCCCATAATCGCCCAACTGACTGAAGCGGAA
AAGAACCGCCAGGCCCGCAATCCCGAGGCCAGCAGCGGCAACAATCACGC
TGCTCCATTTCACAGGTTGTACGTGGGTAACATTCATTTCAGCATCACTG
AAAGTGACCTTCAGAACGTCTTTGAGCCTTTTGGCGAACTCGAATTTGTC
CAGCTGCAGAAGGATGAGACTGGTCGTAGCAGGGGTTATGGATTCGTGCA
GTTCCGTGATCCAAACCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGAT
TTGACCTTGCTGGTCGAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTC
ACTCCTGACTCGAACGCACAACGCATGCAGAGCCAAGGTGCAAACCAACA
TAACTTCCAGGGCTCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAG
CCGGCGGTACCAGCAACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAG
GGGGCCGGCGCTAGTGCATTGGACGATACGGATGTTGCCGGCGTAAATTT
CAACAACTACAGTAGGGATGCATTGATGCGCAAGCTTGCAAGAACAGATG
AACCATCCGAGCCTGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAG
ACTGAGGCTAAGCCTCTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGT
CATGCTCCGCAACATGTTTGACCCCAACGAGGAGGAGGGTGAAGCTTGGA
TTAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGAAGACAAATATGGC
CATGTTGTTCACATTGCACTAGATCCCAACTCGCAAGGCGATATTTACCT
GAAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATCAAGGGCCTGAACG
GGCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCCCGTCGTCGACGCT
GTCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCTAAATGTCAGGTCT
CGATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCCATCTCAAGACC
CTCCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAACTGACAGTAAC
GAACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGCAAGCGCAGGGA
CCGCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGGAGATGAAGACA
TGAAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAAGCCATAGAAGC
AGAAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGGTCTCGTCGTGA
CCGTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTACCGCGGTGGTG
GACGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATCGCTATTACCGC
CCCTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGATAGACGCACTCG
CCGTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGAGAGGACCCCGG
AGCCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCGTTCAGCAGCTT
GCTGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTTGAGAAAGTCGG
ACCTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAGTGGACGGTCTA
AAGGTGTCGGTTATGTCGAGTTCAAAAGCGAAGACTCCGTTGCGCCCGCT
ATCCAGCTTACCGGACAGAAACTTCTAGGAATTCCCATAATCGCCCAACT
GACTGAAGCGGAAAAGAACCGCCAGGCCCGCAATCCCGAGGCCAGCAGCG
GCAACAATCACGCTGCTCCATTTCACAGGTTGTACGTGGGTAACATTCAT
TTCAGCATCACTGAAAGTGACCTTCAGAACGTCTTTGAGCCTTTTGGCGA
ACTCGAATTTGTCCAGCTGCAGAAGGATGAGACTGGTCGTAGCAGGGGTT
ATGGATTCGTGCAGTTCCGTGATCCAAACCAGGCTCGTGAGGCTTTGGAA
AAGATGAATGGATTTGACCTTGCTGGTCGAGCAATCCGCGTTGGCCTTGG
CAACGATAAGTTCACTCCTGACTCGAACGCACAACGCATGCAGAGCCAAG
GTGCAAACCAACATAACTTCCAGGGCTCTCTCTTCTCGGGTCACGGAGGA
CGTGGTGTTCAAGCCGGCGGTACCAGCAACTTCGACCGCGCTGGTGGCCG
TGACTCCGAAAAGGGGGCCGGCGCTAGTGCATTGGACGATACGGATGTTG
CCGGCGTAAATTTCAACAACTACAGTAGGGATGCATTGATGCGCAAGCTT
GCAAGAACAGATGAACCATCCGAGCCTGCTGCCGATGACCAGCAGAAGGT
GCTCCGTCCCAAGACTGAGGCTAAGCCTCTGCCTGTTAACGTCAACATGG
CAAGTCGGTGTGTCATGCTCCGCAACATGTTTGACCCCAACGAGGAGGAG
GGTGAAGCTTGGATTAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGA
AGACAAATATGGCCATGTTGTTCACATTGCACTAGATCCCAACTCGCAAG
GCGATATTTACCTGAAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATC
AAGGGCCTGAACGGGCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCC
CGTCGTCGACGCTGTCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_12060ATCC64974_12060Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12060-T1.exon1ATCC64974_12060-T1.exon1Aspergillus niger N402exon
ATCC64974_12060-T1.exon2ATCC64974_12060-T1.exon2Aspergillus niger N402exon
ATCC64974_12060-T1.exon3ATCC64974_12060-T1.exon3Aspergillus niger N402exon
ATCC64974_12060-T1.exon4ATCC64974_12060-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12060-T1.cdsATCC64974_12060-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12060-T1ATCC64974_12060-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR006509
DBxrefInterPro:IPR029123
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF15519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:230329..232216 +
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