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ATCC64974_12470-T1, ATCC64974_12470-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_12470-T1
Unique NameATCC64974_12470-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:354490..355616+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_12470-T1 ID=ATCC64974_12470-T1|Name=ATCC64974_12470-T1|organism=Aspergillus niger N402|type=mRNA|length=1127bp|location=Sequence derived from alignment at OGUI01000003.1:354490..355616+ (Aspergillus niger N402)
ATGCTCCACTTCCGCACGGAAGGCTTCAACGGCTGCGCAGTCAAGTACTC
ACCCTTCTTCGATAACCGCCTCGCCGTCGCCTCATCCGCCAATTTCGGCC
TAGTCGGCAATGGCCGTCTCTACATTCTTGAACTGACTCCGAACGGAATA
GTTCCCTACAAATGGTATCCCTTCCCCCATCCCCCACCTATCCCCAACCA
AACTAACCAACCCACCAAAAACCCAGGTTCACAACCCAAGACTCCCTCTA
CGACCTCGCCTGGTCCGAAATACATGAAAACCAAGTTCTAACCGCCTCCG
GCGACGGAAGCATCAAGCTCTTCGATACGGAGGTCGCCGACTTCCCAATT
CAAAACTGGAAAGAGCACAACCGCGAAGTCTTCAGCGTGCACTGGAACCT
CGTCGCGAAGGACCGTTTCTGCAGTAGTAGTTGGGACGGGACAGTGCGCG
TGTGGACGCCCAATCGCCCACATTCCCTCCTCACTCTGCCGACGCATAGC
TGCACGTACAGCGCGGCGTTTTCTCCGCATTCGCCAGATATTTTGTCGTG
TGTGTCGTCAGATTCGTATCTACGGGTGTTTGATCTACGGACGCCGGCGT
CGGCGTCGAATCATTTGACTTTGCAGGTGCCGATTCATGGAGGTGGTGGT
GGAGGGGTAGTGCCGGGTGGGGGACCGATGGCGGCGACGGCGCCGGCGGA
GGCGTTGACGATGGATTGGAACAAGTATCGGCCGTCGACGATAGCTACGG
CGGGGGTGGATCGGACGATTCGCACGTTTGATATTCGGGCGCCAGGGCAG
GGGCCGCAGACGGTGATGCTGGGACATGAGTATGCGGTTAGGAAGGTGGC
GTGGTCGCCGCATTTGTCGGATGTGTTGTTGAGTGCCAGTTATGATATGA
CGTGTCGGGCTTGGAGTGATCAGACGCCGCCGGGGGCGGTTGGCGATGTC
GATGTGATGCGGGCTGGGCCGGGACCGAATATGGGGGTGGAGTTGGGGAG
GATGGGCCGGCATACGGAGTTTGTGACGGGGGTGGATTGGTGTTTGTTTG
GGAGTGAGGGATGGTGTGCGAGTGTGGGATGGGATGAGAGTTTGTATGTG
TGGGATGTGAGGGCCGTGATGGGGTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:354490..355616+

>ATCC64974_12470-T1 ID=ATCC64974_12470-T1|Name=ATCC64974_12470-T1|organism=Aspergillus niger N402|type=CDS|length=2130bp|location=Sequence derived from alignment at OGUI01000003.1:354490..355616+ (Aspergillus niger N402)
ATGCTCCACTTCCGCACGGAAGGCTTCAACGGCTGCGCAGTCAAGTACTC
ACCCTTCTTCGATAACCGCCTCGCCGTCGCCTCATCCGCCAATTTCGGCC
TAGTCGGCAATGGCCGTCTCTACATTCTTGAACTGACTCCGAACGGAATA
GTTCCCTACAAATGGTTCACAACCCAAGACTCCCTCTACGACCTCGCCTG
GTCCGAAATACATGAAAACCAAGTTCTAACCGCCTCCGGCGACGGAAGCA
TCAAGCTCTTCGATACGGAGGTCGCCGACTTCCCAATTCAAAACTGGAAA
GAGCACAACCGCGAAGTCTTCAGCGTGCACTGGAACCTCGTCGCGAAGGA
CCGTTTCTGCAGTAGTAGTTGGGACGGGACAGTGCGCGTGTGGACGCCCA
ATCGCCCACATTCCCTCCTCACTCTGCCGACGCATAGCTGCACGTACAGC
GCGGCGTTTTCTCCGCATTCGCCAGATATTTTGTCGTGTGTGTCGTCAGA
TTCGTATCTACGGGTGTTTGATCTACGGACGCCGGCGTCGGCGTCGAATC
ATTTGACTTTGCAGGTGCCGATTCATGGAGGTGGTGGTGGAGGGGTAGTG
CCGGGTGGGGGACCGATGGCGGCGACGGCGCCGGCGGAGGCGTTGACGAT
GGATTGGAACAAGTATCGGCCGTCGACGATAGCTACGGCGGGGGTGGATC
GGACGATTCGCACGTTTGATATTCGGGCGCCAGGGCAGGGGCCGCAGACG
GTGATGCTGGGACATGAGTATGCGGTTAGGAAGGTGGCGTGGTCGCCGCA
TTTGTCGGATGTGTTGTTGAGTGCCAGTTATGATATGACGTGTCGGGCTT
GGAGTGATCAGACGCCGCCGGGGGCGGTTGGCGATGTCGATGTGATGCGG
GCTGGGCCGGGACCGAATATGGGGGTGGAGTTGGGGAGGATGGGCCGGCA
TACGGAGTTTGTGACGGGGGTGGATTGGTGTTTGTTTGGGAGTGAGGGAT
GGTGTGCGAGTGTGGGATGGGATGAGAGTTTGTATGTGTGGGATGTGAGG
GCCGTGATGGGGTAAATGCTCCACTTCCGCACGGAAGGCTTCAACGGCTG
CGCAGTCAAGTACTCACCCTTCTTCGATAACCGCCTCGCCGTCGCCTCAT
CCGCCAATTTCGGCCTAGTCGGCAATGGCCGTCTCTACATTCTTGAACTG
ACTCCGAACGGAATAGTTCCCTACAAATGGTTCACAACCCAAGACTCCCT
CTACGACCTCGCCTGGTCCGAAATACATGAAAACCAAGTTCTAACCGCCT
CCGGCGACGGAAGCATCAAGCTCTTCGATACGGAGGTCGCCGACTTCCCA
ATTCAAAACTGGAAAGAGCACAACCGCGAAGTCTTCAGCGTGCACTGGAA
CCTCGTCGCGAAGGACCGTTTCTGCAGTAGTAGTTGGGACGGGACAGTGC
GCGTGTGGACGCCCAATCGCCCACATTCCCTCCTCACTCTGCCGACGCAT
AGCTGCACGTACAGCGCGGCGTTTTCTCCGCATTCGCCAGATATTTTGTC
GTGTGTGTCGTCAGATTCGTATCTACGGGTGTTTGATCTACGGACGCCGG
CGTCGGCGTCGAATCATTTGACTTTGCAGGTGCCGATTCATGGAGGTGGT
GGTGGAGGGGTAGTGCCGGGTGGGGGACCGATGGCGGCGACGGCGCCGGC
GGAGGCGTTGACGATGGATTGGAACAAGTATCGGCCGTCGACGATAGCTA
CGGCGGGGGTGGATCGGACGATTCGCACGTTTGATATTCGGGCGCCAGGG
CAGGGGCCGCAGACGGTGATGCTGGGACATGAGTATGCGGTTAGGAAGGT
GGCGTGGTCGCCGCATTTGTCGGATGTGTTGTTGAGTGCCAGTTATGATA
TGACGTGTCGGGCTTGGAGTGATCAGACGCCGCCGGGGGCGGTTGGCGAT
GTCGATGTGATGCGGGCTGGGCCGGGACCGAATATGGGGGTGGAGTTGGG
GAGGATGGGCCGGCATACGGAGTTTGTGACGGGGGTGGATTGGTGTTTGT
TTGGGAGTGAGGGATGGTGTGCGAGTGTGGGATGGGATGAGAGTTTGTAT
GTGTGGGATGTGAGGGCCGTGATGGGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_12470ATCC64974_12470Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12470-T1.exon1ATCC64974_12470-T1.exon1Aspergillus niger N402exon
ATCC64974_12470-T1.exon2ATCC64974_12470-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12470-T1.cdsATCC64974_12470-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12470-T1ATCC64974_12470-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262VOC
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:354490..355616 +
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