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ATCC64974_12830-T1, ATCC64974_12830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_12830-T1
Unique NameATCC64974_12830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:468058..468982-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_12830-T1 ID=ATCC64974_12830-T1|Name=ATCC64974_12830-T1|organism=Aspergillus niger N402|type=mRNA|length=925bp|location=Sequence derived from alignment at OGUI01000003.1:468058..468982- (Aspergillus niger N402)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTGTAAGTTGGACTCTATAGTTACGTACTATTGCG
ACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG
GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGT
ATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGGAAGGAATATGCCCT
GTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA
CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGT
CTTCCTTAGCTCCGCCTGCGACACTGTTGCTAAACTACTGGAATAGCTTC
TTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT
CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGG
CGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACC
GACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG
ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCC
CTTGCTTGATTTCCACTCGTCTTGGGCTAATGATGGACATAGACTATCTT
TACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCC
TTCCAGACAGCGCAAGGACCGATAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:468058..468982-

>ATCC64974_12830-T1 ID=ATCC64974_12830-T1|Name=ATCC64974_12830-T1|organism=Aspergillus niger N402|type=CDS|length=2592bp|location=Sequence derived from alignment at OGUI01000003.1:468058..468982- (Aspergillus niger N402)
ACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTG
GAAAATCCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCC
GCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACT
ATGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGC
CCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTG
GATTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATT
TTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATAC
CCTCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCA
AAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTAT
GCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGG
CGCGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGAC
CAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTAC
TATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGA
AAATCCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCCGC
TGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTAT
GCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCC
GGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGA
TTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTT
ATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACT
ATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCC
TCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAAA
GCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGC
TCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCG
CGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACCA
GCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTACTA
TCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAA
ATCCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCCGCTG
CAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGC
GACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGG
AGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATT
GTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTAT
GATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTAT
GGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTC
GTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAAAGC
TCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTC
CCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCG
GCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACCAGC
GCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTACTATC
TTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAAT
CCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCCGCTGCA
GATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGA
CCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGGAG
CCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATTGT
GGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTATGA
TCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGG
AAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGT
CTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAAAGCTC
CACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC
AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGC
AGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACCAGCGC
TAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0047750cholestenol delta-isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0016125sterol metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_12830ATCC64974_12830Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12830-T1ATCC64974_12830-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12830-T1.cdsATCC64974_12830-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12830-T1.exon4ATCC64974_12830-T1.exon4Aspergillus niger N402exon
ATCC64974_12830-T1.exon3ATCC64974_12830-T1.exon3Aspergillus niger N402exon
ATCC64974_12830-T1.exon2ATCC64974_12830-T1.exon2Aspergillus niger N402exon
ATCC64974_12830-T1.exon1ATCC64974_12830-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR033118
DBxrefInterPro:IPR007905
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:468058..468982 -
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