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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:468058..468982- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_12830-T1 ID=ATCC64974_12830-T1|Name=ATCC64974_12830-T1|organism=Aspergillus niger N402|type=mRNA|length=925bp|location=Sequence derived from alignment at OGUI01000003.1:468058..468982- (Aspergillus niger N402)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTGTAAGTTGGACTCTATAGTTACGTACTATTGCG
ACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG
GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGT
ATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGGAAGGAATATGCCCT
GTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA
CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGT
CTTCCTTAGCTCCGCCTGCGACACTGTTGCTAAACTACTGGAATAGCTTC
TTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT
CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGG
CGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACC
GACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG
ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCC
CTTGCTTGATTTCCACTCGTCTTGGGCTAATGATGGACATAGACTATCTT
TACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCC
TTCCAGACAGCGCAAGGACCGATAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:468058..468982- >ATCC64974_12830-T1 ID=ATCC64974_12830-T1|Name=ATCC64974_12830-T1|organism=Aspergillus niger N402|type=CDS|length=2592bp|location=Sequence derived from alignment at OGUI01000003.1:468058..468982- (Aspergillus niger N402)
ACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTG
GAAAATCCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCC
GCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACT
ATGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGC
CCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTG
GATTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATT
TTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATAC
CCTCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCA
AAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTAT
GCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGG
CGCGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGAC
CAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTAC
TATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGA
AAATCCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCCGC
TGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTAT
GCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCC
GGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGA
TTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTT
ATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACT
ATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCC
TCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAAA
GCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGC
TCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCG
CGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACCA
GCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTACTA
TCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAA
ATCCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCCGCTG
CAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGC
GACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGG
AGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATT
GTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTAT
GATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTAT
GGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTC
GTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAAAGC
TCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTC
CCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCG
GCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACCAGC
GCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTACTATC
TTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAAT
CCTTCCAGACAGCGCAAGGACCGATAACATCCTCTGCGCCATCCGCTGCA
GATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTATGCGA
CCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGGAG
CCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATTGT
GGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTATGA
TCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGG
AAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCTCGT
CTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAAAGCTC
CACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGCTCCC
AATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCGCGGC
AGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACCAGCGC
TAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0047750 | cholestenol delta-isomerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016125 | sterol metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_12830-T1 | ATCC64974_12830-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033118 |
| DBxref | InterPro:IPR007905 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:468058..468982 - |
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