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ATCC64974_12930-T1, ATCC64974_12930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_12930-T1
Unique NameATCC64974_12930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:499620..502176-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_12930-T1 ID=ATCC64974_12930-T1|Name=ATCC64974_12930-T1|organism=Aspergillus niger N402|type=mRNA|length=2557bp|location=Sequence derived from alignment at OGUI01000003.1:499620..502176- (Aspergillus niger N402)
ATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCAC
ATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCG
AGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAG
AGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGT
GAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGG
GAAAGAATGCCCCTGTTCAGGAGGAAGAGGATGAGGATGAAGAGGAGGAA
GAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGA
TGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTA
ATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGAT
GATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAA
GCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATG
ATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTG
CTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGA
GAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGG
CTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGCT
GCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATAT
TGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAG
AGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAG
TCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCG
TCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCA
TTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGT
AGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCT
CGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCA
TTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACA
AAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTT
CAGTCTTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCCCGATGTGATCA
TCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTC
ACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGATCGCATGCT
CGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCA
AGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGAC
AAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGC
CAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCC
CCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAG
ATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCA
CCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCC
ACGGTAGCATGAGCCAAGAACAGGTATGTTATTTTACATCGACTTTCATT
TTCTTCAATACGATCGATGATACTAATCGTGGGGTTTTCCAAACTACAGC
GTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCTG
GCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGACGGT
CATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGTGTTG
GTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGCC
GAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGCA
AGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGATTCCT
GGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTCG
GAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGACCAA
GGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAGC
GTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGGC
GCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGCA
GAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAGCGCC
AGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAGCATG
AAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAGGGCAA
GAAATGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:499620..502176-

>ATCC64974_12930-T1 ID=ATCC64974_12930-T1|Name=ATCC64974_12930-T1|organism=Aspergillus niger N402|type=CDS|length=4962bp|location=Sequence derived from alignment at OGUI01000003.1:499620..502176- (Aspergillus niger N402)
CGTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCT
GGCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGACGG
TCATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGTGTT
GGTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGC
CGAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGC
AAGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGATTCC
TGGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTC
GGAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGACCA
AGGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAG
CGTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGG
CGCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGC
AGAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAGCGC
CAGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAGCAT
GAAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAGGGCA
AGAAATGAATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTC
GTGCTCACATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGA
GGAGGGCGAGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGA
AGCGCAAGAGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAAC
AAGAAGGTGAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAA
AAAGAAGGGAAAGAATGCCCCTGTTCAGGAGGAAGAGGATGAGGATGAAG
AGGAGGAAGAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTC
GAGTTCGATGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTG
GGAGGTTAATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGG
ATATCGATGATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTG
ATTCGCAAGCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATT
GGAGGATGATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATG
ATGAGCTGCTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAG
GAGAGCGAGAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGA
TGAGGAGGCTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATG
ACGATGCTGCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCG
GATGATATTGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGC
CGAGGAAGAGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGA
CTTCCGAGTCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAAC
CTCTCTCGTCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCC
TACACCCATTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATA
TTGTCGGTAGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTC
CCGATTCTCGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCG
TGTTGCCATTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATG
TCGCTACAAAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTC
GGTGGTTTCAGTCTTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCCCGA
TGTGATCATCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGG
CCAGCTTCACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGAT
CGCATGCTCGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTAC
GATCCCCAAGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACA
CTGTCGACAAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATG
GTCGACGCCAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCG
TCTGCGCCCCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCT
GCAAAGAGATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAG
GAGGCGCACCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGC
CGAGCTCCACGGTAGCATGAGCCAAGAACAGCGTATCAAGAGTGTCGAGA
ATTTCCGTGAGGGCAAGGCGGCGTTCCTGCTGGCTACGGATCTGGCGTCG
CGTGGTCTGGATATCAAGGGCGTTGAGACGGTCATCAACTACGAAGCGCC
GCAGAGCCATGAGATCTACCTGCATCGTGTTGGTCGTACTGCGCGTGCGG
GCCGCTCCGGTCGGGCCTGCACCATTGCCGCCGAGCCTGACCGCAAGGTG
GTCAAGGCGGCGGTGAAGGCGGGCAAGTCGCAAGGAGCCAAGATTGCCAG
CCGTGTGATTGAACCGGCGGTGGCGGATTCCTGGGCGGCCAAGGCGGAGG
AGTTGGCGGACGAGGTGGAAGAGGTGTTGTCGGAGGAGAAGCTCGAGAAG
CAGCTGGCACAGGCGGAGATGCAAGTGACCAAGGGAGAGAACCTGATCAA
GCACGAGGCGGAGATCAAGTCGCGGCCGAAGCGTACTTGGTTCGAGACGG
AGCGCGACAAGAAGGCGGCGCGGAAGCTGGGCGCGGCGGAGCTCAACGGG
CCCGATGCCGGCATGTCCAAGAAGGAGAAGCAGAAGCTCAGCAACAAGGA
CAAGAAGCGTCTGGATGATTCCCGTCAGCGCCAGGAAGCGGGTGCTGGTT
GGAAGAAGGGCCGGGCAACACGGGAGAGCATGAAGAATGGGCAATTGCCC
AAAGCTAAGAAGGACAACAAGAAGAAGGGCAAGAAATGAATGGCCGGAAC
GAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCACATTGTCGGACG
ATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCGAGGGCGACGAT
GGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAGAGAGATGATGC
TGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGTGAAGAAGCAGG
AACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGGGAAAGAATGCC
CCTGTTCAGGAGGAAGAGGATGAGGATGAAGAGGAGGAAGAGGATCAGGG
TGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGATGTCGGCGGTG
CTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTAATGGTAATGAG
GAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGATGATATTATTTC
GAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAAGCAGAAGAAGA
AGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATGATGATGAGGAG
GATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTGCTTGCGGAGGA
TGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGAGAAGTCCGATG
CGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGGCTGAGGGCAGT
GATGAAGACGAGCAGATGGATGAGGATGATGACGATGCTGCTTCGGATGA
CGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATATTGCCTCTGATC
GGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAGAGGAGAAGCGC
AAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAGTCTGCTATGGC
AGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCGTCCCATCCTTC
GTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCATTCAGCGCAAG
ACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGTAGTGCCGTTAC
TGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCTCGAACGTCTGC
TGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCATTCTCATGCCC
ACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACAAAGCTGGCCAC
ATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTTCAGTCTTCGCG
AGCAGGAGAACATCTTGAAGAAGCGTCCCGATGTGATCATCGCCACCCCC
GGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTCACCGTTGATAC
TCTGGAAATCCTGGTTCTGGATGAAGCCGATCGCATGCTCGAGGACGGTT
TCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCAAGTCGCGCCAG
ACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGACAAGCTCATTCG
CGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGCCAAGAAGAACA
CGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCCCCGGACGTGAG
GACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAGATCTACACCGG
TCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCACCGGGTGCGTA
TCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCCACGGTAGCATG
AGCCAAGAACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DRS1ATCC64974_12930Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12930-T1ATCC64974_12930-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12930-T1.cdsATCC64974_12930-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_12930-T1.exon2ATCC64974_12930-T1.exon2Aspergillus niger N402exon
ATCC64974_12930-T1.exon1ATCC64974_12930-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000031.2
NoteSMCOG1122:ATP-dependent RNA helicase
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Productnucleolar DEAD-box protein required for synthesis of 60S ribosomal subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:499620..502176 -
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