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ATCC64974_13320-T1, ATCC64974_13320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_13320-T1
Unique NameATCC64974_13320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:652071..652825-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_13320-T1 ID=ATCC64974_13320-T1|Name=ATCC64974_13320-T1|organism=Aspergillus niger N402|type=mRNA|length=755bp|location=Sequence derived from alignment at OGUI01000003.1:652071..652825- (Aspergillus niger N402)
ATGACTTCCAAATGCACCCTCCCAGATCTACCCTACGACTACGATGTAAG
TCACACCCCCTTCCTTCCCACCCCCCATTAACCCCCATCTCATCAATAAC
AGGCCCTCGAACCCATCATCTCCAAACAAATCATGGAACTCCACCACAAA
AAGCACCACCAGACCTATGTAAACAACCTAAACGCCGCCCTCGCTTCTCA
AGCCTCCGCTCTCGACAGCAACGACATCACCCAGCTCATCAGCATCCAGC
AGAAACTCAAGTTCAACGGCGGCGGCCACATCAACCATTCTCTGTTTTGG
AAGAACTTGGCTCGCTACGACTCCCCGGCCACTAACCTGGAGAGATCCGC
CCCGAGCCTCAAAGACGCCATCGAGAAGCAGTGGGGATCAGTCAAAAACT
TCACGGATGCGTTTGAGGCGGTGCTGCTGGGCATCCAAGGCAGCGGATGG
GGCTGGCTGGTGAGTTCGGGTAAGACGGGATTCCTTGAGATTGTCACCAC
GAAGGATCAGGATCCAGTGACGGGACCGATTCCGGTGTTCGGAGTGGATA
TGTGGGAACATGCTTATTATCTGCAGGTAAGTATCCCCTCCTTCCAGATT
GCTTTGGTTGAGTAATGCTAATGATGATGGTGGTGGTATAGTACTTGAAC
AACAAAGCCTCCTACGTGCAGAACATCTGGAAGGTGATTAACTGGGAAGA
AGCGGAGCATCGGTATCTGAATGGTACGGAGGAACTGGGTTCGTTGAAGT
TGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:652071..652825-

>ATCC64974_13320-T1 ID=ATCC64974_13320-T1|Name=ATCC64974_13320-T1|organism=Aspergillus niger N402|type=CDS|length=1899bp|location=Sequence derived from alignment at OGUI01000003.1:652071..652825- (Aspergillus niger N402)
TACTTGAACAACAAAGCCTCCTACGTGCAGAACATCTGGAAGGTGATTAA
CTGGGAAGAAGCGGAGCATCGGTATCTGAATGGTACGGAGGAACTGGGTT
CGTTGAAGTTGTAGGCCCTCGAACCCATCATCTCCAAACAAATCATGGAA
CTCCACCACAAAAAGCACCACCAGACCTATGTAAACAACCTAAACGCCGC
CCTCGCTTCTCAAGCCTCCGCTCTCGACAGCAACGACATCACCCAGCTCA
TCAGCATCCAGCAGAAACTCAAGTTCAACGGCGGCGGCCACATCAACCAT
TCTCTGTTTTGGAAGAACTTGGCTCGCTACGACTCCCCGGCCACTAACCT
GGAGAGATCCGCCCCGAGCCTCAAAGACGCCATCGAGAAGCAGTGGGGAT
CAGTCAAAAACTTCACGGATGCGTTTGAGGCGGTGCTGCTGGGCATCCAA
GGCAGCGGATGGGGCTGGCTGGTGAGTTCGGGTAAGACGGGATTCCTTGA
GATTGTCACCACGAAGGATCAGGATCCAGTGACGGGACCGATTCCGGTGT
TCGGAGTGGATATGTGGGAACATGCTTATTATCTGCAGATGACTTCCAAA
TGCACCCTCCCAGATCTACCCTACGACTACGATTACTTGAACAACAAAGC
CTCCTACGTGCAGAACATCTGGAAGGTGATTAACTGGGAAGAAGCGGAGC
ATCGGTATCTGAATGGTACGGAGGAACTGGGTTCGTTGAAGTTGTAGGCC
CTCGAACCCATCATCTCCAAACAAATCATGGAACTCCACCACAAAAAGCA
CCACCAGACCTATGTAAACAACCTAAACGCCGCCCTCGCTTCTCAAGCCT
CCGCTCTCGACAGCAACGACATCACCCAGCTCATCAGCATCCAGCAGAAA
CTCAAGTTCAACGGCGGCGGCCACATCAACCATTCTCTGTTTTGGAAGAA
CTTGGCTCGCTACGACTCCCCGGCCACTAACCTGGAGAGATCCGCCCCGA
GCCTCAAAGACGCCATCGAGAAGCAGTGGGGATCAGTCAAAAACTTCACG
GATGCGTTTGAGGCGGTGCTGCTGGGCATCCAAGGCAGCGGATGGGGCTG
GCTGGTGAGTTCGGGTAAGACGGGATTCCTTGAGATTGTCACCACGAAGG
ATCAGGATCCAGTGACGGGACCGATTCCGGTGTTCGGAGTGGATATGTGG
GAACATGCTTATTATCTGCAGATGACTTCCAAATGCACCCTCCCAGATCT
ACCCTACGACTACGATTACTTGAACAACAAAGCCTCCTACGTGCAGAACA
TCTGGAAGGTGATTAACTGGGAAGAAGCGGAGCATCGGTATCTGAATGGT
ACGGAGGAACTGGGTTCGTTGAAGTTGTAGGCCCTCGAACCCATCATCTC
CAAACAAATCATGGAACTCCACCACAAAAAGCACCACCAGACCTATGTAA
ACAACCTAAACGCCGCCCTCGCTTCTCAAGCCTCCGCTCTCGACAGCAAC
GACATCACCCAGCTCATCAGCATCCAGCAGAAACTCAAGTTCAACGGCGG
CGGCCACATCAACCATTCTCTGTTTTGGAAGAACTTGGCTCGCTACGACT
CCCCGGCCACTAACCTGGAGAGATCCGCCCCGAGCCTCAAAGACGCCATC
GAGAAGCAGTGGGGATCAGTCAAAAACTTCACGGATGCGTTTGAGGCGGT
GCTGCTGGGCATCCAAGGCAGCGGATGGGGCTGGCTGGTGAGTTCGGGTA
AGACGGGATTCCTTGAGATTGTCACCACGAAGGATCAGGATCCAGTGACG
GGACCGATTCCGGTGTTCGGAGTGGATATGTGGGAACATGCTTATTATCT
GCAGATGACTTCCAAATGCACCCTCCCAGATCTACCCTACGACTACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006801superoxide metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0004784superoxide dismutase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_13320ATCC64974_13320Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13320-T1ATCC64974_13320-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13320-T1.cdsATCC64974_13320-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_13320-T1.exon3ATCC64974_13320-T1.exon3Aspergillus niger N402exon
ATCC64974_13320-T1.exon2ATCC64974_13320-T1.exon2Aspergillus niger N402exon
ATCC64974_13320-T1.exon1ATCC64974_13320-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR019833
DBxrefInterPro:IPR019832
DBxrefInterPro:IPR036324
DBxrefInterPro:IPR036314
DBxrefInterPro:IPR019831
DBxrefInterPro:IPR001189
DBxrefPFAM:PF00081
DBxrefPFAM:PF02777
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:652071..652825 -
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