You are here

Home

ATCC64974_15210-T1, ATCC64974_15210-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_15210-T1
Unique NameATCC64974_15210-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1216893..1218675-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_15210-T1 ID=ATCC64974_15210-T1|Name=ATCC64974_15210-T1|organism=Aspergillus niger N402|type=mRNA|length=1783bp|location=Sequence derived from alignment at OGUI01000003.1:1216893..1218675- (Aspergillus niger N402)
ATGGCGCAGCCCCAGCAACAACACTTGACGCAGTCATTTTCCCCGCCGGT
TTCCTCACCTTCACCTGGTGCCCCATCGCCTGTAAATGGTGGTGTCCCTC
CACCTCTCAAGCGTCAACGTCTCTCACCTCTCCCTCAGTCCCAGTCCCCT
TACGCCTCACCTAGCTTCGGGACTTTACAACTGCCACAACACCAGCCCGC
TCCTATGACTACACCGACCATGAACATGAACGGCGTCCCCCAGTCTCCCG
CTCCTCCTCCACCTCCACCTCCAGGCGCGATGGGGCCTCCTTCTCGACCG
GCAGACAAGGCTACCGATGCTGCTGAGCTCACAGATGTGCTAGCATCATC
AGGAATTGATGTCCGGGAAGAGGAGGCCTACTTGACGAGCAGTTACTCTG
GTCCTCCGGTGCAGGCTCAACAACCACCTCGCCCTCAACAGCCACAGATC
CCGCAGCAACAACCTCAACAGTCGGTGCCACCTGCTGTCAACACCTCGTT
CACATCACAAGCATCGACAATTGGGAGCGTTCCTACGACTCCTAGTTTTG
AACAACCCTCCCCATATAAGCCGGCGACGACGCAGGATTCCTTCTACAGG
GAGCCGTCGACGCAGCCTCCTGCGCCTTTCAAGGATCCCAATGAGCCGAC
CCGCGAAGACACTGAGGCAGCTCGGCGCGCGCAGTATACTCTACAAGACT
CTTTCTTGTGGACTAAGGTATTGGAGCAGAGGCTGCAGAAACGTGGATTC
GAACTCGGTGTCCGTATACCGGCAGAGGGCCTGTATCATCCCGTGCCCGG
TCGCCAACAACCTATCGAAGTCACTGGACCAGATGGATCATCGATCATAC
GTTCCGGGCAAACAATCTTGAACCAAACCGGCGCACCTCTATTGGACATT
CTCAGCTTAATGTCCATCGCATGTGAAGAGCGGTTGCGAACGGTGGTCGA
TTATTCTTCAACACTGGCTCGAAGTCGACGCGCGCACTCACACGGAATTG
TCCCCACCGATTGGAAAGACGTTGCTACATCGGCTAATGCTGTCAATGGG
AATGTGGAAAATCCTAGCACACCACTTAAGCGTAGGTTTACCCCGAGATA
TTAAGAAGTGTTACAAACTAATCAATTGGCAAATAGGCCCGCTATCAGCA
ACCGAACCGCAGGGTACCAAAGCACTGTCGGAGAAGTATCGTCTACTTAT
GGACAAGGACAATTCCAGCGAAGAGGCCCGTGCTGCAAAACGTACCAGGC
GCAGCACGAATGCCATCCTTGGAGAAGGGGGAGCGAGCCGATCGGAATCC
GTGGATATCCCTGGCTCCGGCGCCTCCACACCGATCGGAGAGAGAGCCCC
TAGTATCGATAAGAAGGGAATGTCGAAGAAGGAAGCTAAGAAGCTGATGG
ATGCCAAGGCGAGCGAGGCTCAGCAACATCAGCAGTCGGTAGAGACCGCG
CGCCTGGCTACTAACAGCATGCTGTCTGGTCGCATGTTTGGAACCAAGAA
ATCTTACTCGTGGCTAAATCGTGGTGCAGCAGCTGGCAGTGGATTCTCCA
CGCCGTCCCGCGTCAACACTGCCACGCCGCCTGCGAGCACGGACAAACCC
GGACGTTCCGGTGAACCTGCCGCCGTGCCTGCAAAACGTCTGGGAACATG
GCGAGAAGACAAAGACAGAGGCGCCGGCATTCAGGTCCGGGATGTTCTGT
TTATGCTGGAGCTGGATGGCAGAGGCCCTCGACACGTACAAAAGGCCTAC
TCGAAGGATGTGAAGGAGGATCGAGCGGACTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:1216893..1218675-

>ATCC64974_15210-T1 ID=ATCC64974_15210-T1|Name=ATCC64974_15210-T1|organism=Aspergillus niger N402|type=CDS|length=3456bp|location=Sequence derived from alignment at OGUI01000003.1:1216893..1218675- (Aspergillus niger N402)
GCCCGCTATCAGCAACCGAACCGCAGGGTACCAAAGCACTGTCGGAGAAG
TATCGTCTACTTATGGACAAGGACAATTCCAGCGAAGAGGCCCGTGCTGC
AAAACGTACCAGGCGCAGCACGAATGCCATCCTTGGAGAAGGGGGAGCGA
GCCGATCGGAATCCGTGGATATCCCTGGCTCCGGCGCCTCCACACCGATC
GGAGAGAGAGCCCCTAGTATCGATAAGAAGGGAATGTCGAAGAAGGAAGC
TAAGAAGCTGATGGATGCCAAGGCGAGCGAGGCTCAGCAACATCAGCAGT
CGGTAGAGACCGCGCGCCTGGCTACTAACAGCATGCTGTCTGGTCGCATG
TTTGGAACCAAGAAATCTTACTCGTGGCTAAATCGTGGTGCAGCAGCTGG
CAGTGGATTCTCCACGCCGTCCCGCGTCAACACTGCCACGCCGCCTGCGA
GCACGGACAAACCCGGACGTTCCGGTGAACCTGCCGCCGTGCCTGCAAAA
CGTCTGGGAACATGGCGAGAAGACAAAGACAGAGGCGCCGGCATTCAGGT
CCGGGATGTTCTGTTTATGCTGGAGCTGGATGGCAGAGGCCCTCGACACG
TACAAAAGGCCTACTCGAAGGATGTGAAGGAGGATCGAGCGGACTGAATG
GCGCAGCCCCAGCAACAACACTTGACGCAGTCATTTTCCCCGCCGGTTTC
CTCACCTTCACCTGGTGCCCCATCGCCTGTAAATGGTGGTGTCCCTCCAC
CTCTCAAGCGTCAACGTCTCTCACCTCTCCCTCAGTCCCAGTCCCCTTAC
GCCTCACCTAGCTTCGGGACTTTACAACTGCCACAACACCAGCCCGCTCC
TATGACTACACCGACCATGAACATGAACGGCGTCCCCCAGTCTCCCGCTC
CTCCTCCACCTCCACCTCCAGGCGCGATGGGGCCTCCTTCTCGACCGGCA
GACAAGGCTACCGATGCTGCTGAGCTCACAGATGTGCTAGCATCATCAGG
AATTGATGTCCGGGAAGAGGAGGCCTACTTGACGAGCAGTTACTCTGGTC
CTCCGGTGCAGGCTCAACAACCACCTCGCCCTCAACAGCCACAGATCCCG
CAGCAACAACCTCAACAGTCGGTGCCACCTGCTGTCAACACCTCGTTCAC
ATCACAAGCATCGACAATTGGGAGCGTTCCTACGACTCCTAGTTTTGAAC
AACCCTCCCCATATAAGCCGGCGACGACGCAGGATTCCTTCTACAGGGAG
CCGTCGACGCAGCCTCCTGCGCCTTTCAAGGATCCCAATGAGCCGACCCG
CGAAGACACTGAGGCAGCTCGGCGCGCGCAGTATACTCTACAAGACTCTT
TCTTGTGGACTAAGGTATTGGAGCAGAGGCTGCAGAAACGTGGATTCGAA
CTCGGTGTCCGTATACCGGCAGAGGGCCTGTATCATCCCGTGCCCGGTCG
CCAACAACCTATCGAAGTCACTGGACCAGATGGATCATCGATCATACGTT
CCGGGCAAACAATCTTGAACCAAACCGGCGCACCTCTATTGGACATTCTC
AGCTTAATGTCCATCGCATGTGAAGAGCGGTTGCGAACGGTGGTCGATTA
TTCTTCAACACTGGCTCGAAGTCGACGCGCGCACTCACACGGAATTGTCC
CCACCGATTGGAAAGACGTTGCTACATCGGCTAATGCTGTCAATGGGAAT
GTGGAAAATCCTAGCACACCACTTAAGCGCCCGCTATCAGCAACCGAACC
GCAGGGTACCAAAGCACTGTCGGAGAAGTATCGTCTACTTATGGACAAGG
ACAATTCCAGCGAAGAGGCCCGTGCTGCAAAACGTACCAGGCGCAGCACG
AATGCCATCCTTGGAGAAGGGGGAGCGAGCCGATCGGAATCCGTGGATAT
CCCTGGCTCCGGCGCCTCCACACCGATCGGAGAGAGAGCCCCTAGTATCG
ATAAGAAGGGAATGTCGAAGAAGGAAGCTAAGAAGCTGATGGATGCCAAG
GCGAGCGAGGCTCAGCAACATCAGCAGTCGGTAGAGACCGCGCGCCTGGC
TACTAACAGCATGCTGTCTGGTCGCATGTTTGGAACCAAGAAATCTTACT
CGTGGCTAAATCGTGGTGCAGCAGCTGGCAGTGGATTCTCCACGCCGTCC
CGCGTCAACACTGCCACGCCGCCTGCGAGCACGGACAAACCCGGACGTTC
CGGTGAACCTGCCGCCGTGCCTGCAAAACGTCTGGGAACATGGCGAGAAG
ACAAAGACAGAGGCGCCGGCATTCAGGTCCGGGATGTTCTGTTTATGCTG
GAGCTGGATGGCAGAGGCCCTCGACACGTACAAAAGGCCTACTCGAAGGA
TGTGAAGGAGGATCGAGCGGACTGAATGGCGCAGCCCCAGCAACAACACT
TGACGCAGTCATTTTCCCCGCCGGTTTCCTCACCTTCACCTGGTGCCCCA
TCGCCTGTAAATGGTGGTGTCCCTCCACCTCTCAAGCGTCAACGTCTCTC
ACCTCTCCCTCAGTCCCAGTCCCCTTACGCCTCACCTAGCTTCGGGACTT
TACAACTGCCACAACACCAGCCCGCTCCTATGACTACACCGACCATGAAC
ATGAACGGCGTCCCCCAGTCTCCCGCTCCTCCTCCACCTCCACCTCCAGG
CGCGATGGGGCCTCCTTCTCGACCGGCAGACAAGGCTACCGATGCTGCTG
AGCTCACAGATGTGCTAGCATCATCAGGAATTGATGTCCGGGAAGAGGAG
GCCTACTTGACGAGCAGTTACTCTGGTCCTCCGGTGCAGGCTCAACAACC
ACCTCGCCCTCAACAGCCACAGATCCCGCAGCAACAACCTCAACAGTCGG
TGCCACCTGCTGTCAACACCTCGTTCACATCACAAGCATCGACAATTGGG
AGCGTTCCTACGACTCCTAGTTTTGAACAACCCTCCCCATATAAGCCGGC
GACGACGCAGGATTCCTTCTACAGGGAGCCGTCGACGCAGCCTCCTGCGC
CTTTCAAGGATCCCAATGAGCCGACCCGCGAAGACACTGAGGCAGCTCGG
CGCGCGCAGTATACTCTACAAGACTCTTTCTTGTGGACTAAGGTATTGGA
GCAGAGGCTGCAGAAACGTGGATTCGAACTCGGTGTCCGTATACCGGCAG
AGGGCCTGTATCATCCCGTGCCCGGTCGCCAACAACCTATCGAAGTCACT
GGACCAGATGGATCATCGATCATACGTTCCGGGCAAACAATCTTGAACCA
AACCGGCGCACCTCTATTGGACATTCTCAGCTTAATGTCCATCGCATGTG
AAGAGCGGTTGCGAACGGTGGTCGATTATTCTTCAACACTGGCTCGAAGT
CGACGCGCGCACTCACACGGAATTGTCCCCACCGATTGGAAAGACGTTGC
TACATCGGCTAATGCTGTCAATGGGAATGTGGAAAATCCTAGCACACCAC
TTAAGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005669transcription factor TFIID complex
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_15210ATCC64974_15210Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15210-T1ATCC64974_15210-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15210-T1.cdsATCC64974_15210-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15210-T1.exon2ATCC64974_15210-T1.exon2Aspergillus niger N402exon
ATCC64974_15210-T1.exon1ATCC64974_15210-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007900
DBxrefPFAM:PF05236
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1216893..1218675 -
Powered by Drupal