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ATCC64974_15260-T1, ATCC64974_15260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_15260-T1
Unique NameATCC64974_15260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1234358..1235256+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_15260-T1 ID=ATCC64974_15260-T1|Name=ATCC64974_15260-T1|organism=Aspergillus niger N402|type=mRNA|length=899bp|location=Sequence derived from alignment at OGUI01000003.1:1234358..1235256+ (Aspergillus niger N402)
ATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGA
AGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCC
TTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCT
CCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGAT
ATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTG
AGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAG
ATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGA
CTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCA
AATTGGTTAACTCGAGGATCAAGAACAGTTAGTGTACCCCAACTTGTCCG
CAAGTTACTATCAAATCCGACGCCTTTTGATATGGCCTGATCACAGTTCC
CTTTGTCTGACCATAACTACAGAGCACCACCTTTACATCCTCGTGGCGCA
ATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCTTAGAA
TTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCGCTCCC
CGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCCTACAG
CGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGAAATGC
AGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGCCGGAT
CTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAGTCCGTCTGC
TGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCAAGGCGTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:1234358..1235256+

>ATCC64974_15260-T1 ID=ATCC64974_15260-T1|Name=ATCC64974_15260-T1|organism=Aspergillus niger N402|type=CDS|length=1608bp|location=Sequence derived from alignment at OGUI01000003.1:1234358..1235256+ (Aspergillus niger N402)
ATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGA
AGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCC
TTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCT
CCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGAT
ATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTG
AGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAG
ATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGA
CTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCA
AATTGGTTAACTCGAGGATCAAGAACAAGCACCACCTTTACATCCTCGTG
GCGCAATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCT
TAGAATTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCG
CTCCCCGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCC
TACAGCGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGA
AATGCAGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGC
CGGATCTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAGTCCG
TCTGCTGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCAAGGC
GTGAATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGG
AGGAAGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCC
CTCCTTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACC
CGCTCCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATC
CGATATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGA
AGTGAGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGT
GCAGATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGA
AGGACTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGAT
GGCAAATTGGTTAACTCGAGGATCAAGAACAAGCACCACCTTTACATCCT
CGTGGCGCAATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACC
GTCTTAGAATTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCT
GCCGCTCCCCGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCC
GGCCTACAGCGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGG
CTGAAATGCAGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGA
ATGCCGGATCTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAG
TCCGTCTGCTGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCA
AGGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_15260ATCC64974_15260Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15260-T1.exon1ATCC64974_15260-T1.exon1Aspergillus niger N402exon
ATCC64974_15260-T1.exon2ATCC64974_15260-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15260-T1.cdsATCC64974_15260-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15260-T1ATCC64974_15260-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092647CM
DBxrefInterPro:IPR022938
DBxrefInterPro:IPR002778
DBxrefInterPro:IPR036521
DBxrefPFAM:PF01922
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1234358..1235256 +
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