You are here

Home

ATCC64974_15440-T1, ATCC64974_15440-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_15440-T1
Unique NameATCC64974_15440-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1283719..1284862-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_15440-T1 ID=ATCC64974_15440-T1|Name=ATCC64974_15440-T1|organism=Aspergillus niger N402|type=mRNA|length=1144bp|location=Sequence derived from alignment at OGUI01000003.1:1283719..1284862- (Aspergillus niger N402)
ATGGACTTCGCATCGTTGATGTCCAAAGAGATCTCCAAAGCAAAACCCAA
AGCAGACTCCCAAGATTCCTCCAAGCCCAAATACACCCGGCGCGGCGATC
TCGAAGCCGCCCGCATCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCC
CGCGAACGCGAAGAGCGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGA
AGCCGACCGCCGTCGCGAGCGGGAAGAGAAGAAGCGCAGACTGGCCGAGG
AGTCGCGCAAGAAGCGCGAAGAGGAAGAAGCTGCTCGCGAACGAGAGCGC
AGGAAGAGACTCGGCTTGCCGGAACTGCCGCCTACGGAGTCTGGAGATGA
TAAAGAGGGTGAGGGTAAGGAAGGTGGCGAGGAGGATATACCGGAGGAGG
AGCTCTTGAAGAAGTTACGGGAGATGGAGGAGCCGGCGATATTGTTTGGG
GAGACGCATAAGGGCCGGCTGAGGCGGTATAGGAGGCTGTTGCAGCGGTC
GTTGACGCCGCAGCCGCAGTTGTCGGATGGGCCGATCCCGACAACGCTGG
AGCTGGTGCCGGAGGTGGACATGAAGATTCCGGAGACGGCGCCGAAGGAT
CTGGAGGGGAAGAAGTTCTTGTTTCGCCAGCTGGCGTCGTACTTCAATAT
GGTGTTGCGGGAGTGGGAGTTGGCGTTGGCGAAGCGAGATGCATCGGTCA
AGCTGAGCTTGCAGGGGAAACAGGCGTATAATGCGATGGTGCAGTCGCGG
GAGAACATGAAGCCGTTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGA
TGGGGTGCTCGACCATGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGC
GGTATGTCGATGCTAATGATGCCTACCTTCGGTTGAGTATTGGAAAAGCG
TACGTATCTTCTTTCTGTTCTGAGGCTTTGTTCCTGGCTAATGTTTTGCA
GTGCTTGGCCTATCGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCA
CGAGAGAAGCTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGA
GATTACGCGCAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGC
AGACGCGTTGGCCCCCGGATGACCAGTTGCAGATCATGGGCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:1283719..1284862-

>ATCC64974_15440-T1 ID=ATCC64974_15440-T1|Name=ATCC64974_15440-T1|organism=Aspergillus niger N402|type=CDS|length=2184bp|location=Sequence derived from alignment at OGUI01000003.1:1283719..1284862- (Aspergillus niger N402)
TGCTTGGCCTATCGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCAC
GAGAGAAGCTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGAG
ATTACGCGCAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGCA
GACGCGTTGGCCCCCGGATGACCAGTTGCAGATCATGGGCTAGATGGACT
TCGCATCGTTGATGTCCAAAGAGATCTCCAAAGCAAAACCCAAAGCAGAC
TCCCAAGATTCCTCCAAGCCCAAATACACCCGGCGCGGCGATCTCGAAGC
CGCCCGCATCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCCCGCGAAC
GCGAAGAGCGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGAAGCCGAC
CGCCGTCGCGAGCGGGAAGAGAAGAAGCGCAGACTGGCCGAGGAGTCGCG
CAAGAAGCGCGAAGAGGAAGAAGCTGCTCGCGAACGAGAGCGCAGGAAGA
GACTCGGCTTGCCGGAACTGCCGCCTACGGAGTCTGGAGATGATAAAGAG
GGTGAGGGTAAGGAAGGTGGCGAGGAGGATATACCGGAGGAGGAGCTCTT
GAAGAAGTTACGGGAGATGGAGGAGCCGGCGATATTGTTTGGGGAGACGC
ATAAGGGCCGGCTGAGGCGGTATAGGAGGCTGTTGCAGCGGTCGTTGACG
CCGCAGCCGCAGTTGTCGGATGGGCCGATCCCGACAACGCTGGAGCTGGT
GCCGGAGGTGGACATGAAGATTCCGGAGACGGCGCCGAAGGATCTGGAGG
GGAAGAAGTTCTTGTTTCGCCAGCTGGCGTCGTACTTCAATATGGTGTTG
CGGGAGTGGGAGTTGGCGTTGGCGAAGCGAGATGCATCGGTCAAGCTGAG
CTTGCAGGGGAAACAGGCGTATAATGCGATGGTGCAGTCGCGGGAGAACA
TGAAGCCGTTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGATGGGGTG
CTCGACCATGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGCGGTATGT
CGATGCTAATGATGCCTACCTTCGGTTGAGTATTGGAAAAGCTGCTTGGC
CTATCGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCACGAGAGAAG
CTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGAGATTACGCG
CAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGCAGACGCGTT
GGCCCCCGGATGACCAGTTGCAGATCATGGGCTAGATGGACTTCGCATCG
TTGATGTCCAAAGAGATCTCCAAAGCAAAACCCAAAGCAGACTCCCAAGA
TTCCTCCAAGCCCAAATACACCCGGCGCGGCGATCTCGAAGCCGCCCGCA
TCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCCCGCGAACGCGAAGAG
CGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGAAGCCGACCGCCGTCG
CGAGCGGGAAGAGAAGAAGCGCAGACTGGCCGAGGAGTCGCGCAAGAAGC
GCGAAGAGGAAGAAGCTGCTCGCGAACGAGAGCGCAGGAAGAGACTCGGC
TTGCCGGAACTGCCGCCTACGGAGTCTGGAGATGATAAAGAGGGTGAGGG
TAAGGAAGGTGGCGAGGAGGATATACCGGAGGAGGAGCTCTTGAAGAAGT
TACGGGAGATGGAGGAGCCGGCGATATTGTTTGGGGAGACGCATAAGGGC
CGGCTGAGGCGGTATAGGAGGCTGTTGCAGCGGTCGTTGACGCCGCAGCC
GCAGTTGTCGGATGGGCCGATCCCGACAACGCTGGAGCTGGTGCCGGAGG
TGGACATGAAGATTCCGGAGACGGCGCCGAAGGATCTGGAGGGGAAGAAG
TTCTTGTTTCGCCAGCTGGCGTCGTACTTCAATATGGTGTTGCGGGAGTG
GGAGTTGGCGTTGGCGAAGCGAGATGCATCGGTCAAGCTGAGCTTGCAGG
GGAAACAGGCGTATAATGCGATGGTGCAGTCGCGGGAGAACATGAAGCCG
TTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGATGGGGTGCTCGACCA
TGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGCGGTATGTCGATGCTA
ATGATGCCTACCTTCGGTTGAGTATTGGAAAAGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_15440ATCC64974_15440Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15440-T1ATCC64974_15440-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15440-T1.cdsATCC64974_15440-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15440-T1.exon2ATCC64974_15440-T1.exon2Aspergillus niger N402exon
ATCC64974_15440-T1.exon1ATCC64974_15440-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG0926420U
DBxrefInterPro:IPR004098
DBxrefInterPro:IPR036285
DBxrefInterPro:IPR014906
DBxrefPFAM:PF08799
DBxrefPFAM:PF02840
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1283719..1284862 -
Powered by Drupal