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ATCC64974_15740-T1, ATCC64974_15740-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_15740-T1
Unique NameATCC64974_15740-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1359875..1360774+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_15740-T1 ID=ATCC64974_15740-T1|Name=ATCC64974_15740-T1|organism=Aspergillus niger N402|type=mRNA|length=900bp|location=Sequence derived from alignment at OGUI01000003.1:1359875..1360774+ (Aspergillus niger N402)
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTGAGCT
CTAGCAACATAAGAGGTTGATCGCAACGCTGGGTATGAGCTAACGAAAAT
TTTGTCGGATAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCC
CAAGTTCTGGGTAATTATACGCCAAAATGCGACTGGAGTGATTGGGACTA
ACGCGGAATAACTAGAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAG
ATGGTTTGCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCAT
CTACCTCGAGAACAAGGTATGCTCGACCTAGCTACTCTCCGCAAACTCGC
GATGCGCTAACGCAATTCTTTAATAGACCCCTATCGGCAAGGTCGATGAA
GTCCTGGGCCCTATCAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGG
AATTGTCGCGACCTCCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCG
ACAAGCTCCTTCCCTTGGAGAAGTATGTTGCGAGTTGTTCTTGATCATGA
TGGAAACTTGTCTAACTTTGCAAAACTAGGTTCCTTCCCAAGCCCAAGCC
CGCTCCCGGTATGATTTCACTCGCTTCGCGCAACAATCCAATGTGCTTGA
TCCTAACCAGAATACAGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:1359875..1360774+

>ATCC64974_15740-T1 ID=ATCC64974_15740-T1|Name=ATCC64974_15740-T1|organism=Aspergillus niger N402|type=CDS|length=3600bp|location=Sequence derived from alignment at OGUI01000003.1:1359875..1360774+ (Aspergillus niger N402)
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTCGCGG
AGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAAGTTCTGGAGATGGGAA
CTGTCATGCATTCTTGCGAAGGCGAGATGGTTTGCGAATCGATCAACCCC
AAGATTCCTTACTTCAACGCCCCCATCTACCTCGAGAACAAGACCCCTAT
CGGCAAGGTCGATGAAGTCCTGGGCCCTATCAACCAGGTCTACTTCACCA
TCAAGCCCCAGGAAGGAATTGTCGCGACCTCCTTCAAGCCTGGTGACAAG
GTCTACATTGGTGGCGACAAGCTCCTTCCCTTGGAGAAGTTCCTTCCCAA
GCCCAAGCCCGCTCCCGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTCGCGG
AGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAAGTTCTGGAGATGGGAA
CTGTCATGCATTCTTGCGAAGGCGAGATGGTTTGCGAATCGATCAACCCC
AAGATTCCTTACTTCAACGCCCCCATCTACCTCGAGAACAAGACCCCTAT
CGGCAAGGTCGATGAAGTCCTGGGCCCTATCAACCAGGTCTACTTCACCA
TCAAGCCCCAGGAAGGAATTGTCGCGACCTCCTTCAAGCCTGGTGACAAG
GTCTACATTGGTGGCGACAAGCTCCTTCCCTTGGAGAAGTTCCTTCCCAA
GCCCAAGCCCGCTCCCGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTCGCGG
AGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAAGTTCTGGAGATGGGAA
CTGTCATGCATTCTTGCGAAGGCGAGATGGTTTGCGAATCGATCAACCCC
AAGATTCCTTACTTCAACGCCCCCATCTACCTCGAGAACAAGACCCCTAT
CGGCAAGGTCGATGAAGTCCTGGGCCCTATCAACCAGGTCTACTTCACCA
TCAAGCCCCAGGAAGGAATTGTCGCGACCTCCTTCAAGCCTGGTGACAAG
GTCTACATTGGTGGCGACAAGCTCCTTCCCTTGGAGAAGTTCCTTCCCAA
GCCCAAGCCCGCTCCCGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTCGCGG
AGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAAGTTCTGGAGATGGGAA
CTGTCATGCATTCTTGCGAAGGCGAGATGGTTTGCGAATCGATCAACCCC
AAGATTCCTTACTTCAACGCCCCCATCTACCTCGAGAACAAGACCCCTAT
CGGCAAGGTCGATGAAGTCCTGGGCCCTATCAACCAGGTCTACTTCACCA
TCAAGCCCCAGGAAGGAATTGTCGCGACCTCCTTCAAGCCTGGTGACAAG
GTCTACATTGGTGGCGACAAGCTCCTTCCCTTGGAGAAGTTCCTTCCCAA
GCCCAAGCCCGCTCCCGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTCGCGG
AGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAAGTTCTGGAGATGGGAA
CTGTCATGCATTCTTGCGAAGGCGAGATGGTTTGCGAATCGATCAACCCC
AAGATTCCTTACTTCAACGCCCCCATCTACCTCGAGAACAAGACCCCTAT
CGGCAAGGTCGATGAAGTCCTGGGCCCTATCAACCAGGTCTACTTCACCA
TCAAGCCCCAGGAAGGAATTGTCGCGACCTCCTTCAAGCCTGGTGACAAG
GTCTACATTGGTGGCGACAAGCTCCTTCCCTTGGAGAAGTTCCTTCCCAA
GCCCAAGCCCGCTCCCGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
ATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAGGTCGCGG
AGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAAGTTCTGGAGATGGGAA
CTGTCATGCATTCTTGCGAAGGCGAGATGGTTTGCGAATCGATCAACCCC
AAGATTCCTTACTTCAACGCCCCCATCTACCTCGAGAACAAGACCCCTAT
CGGCAAGGTCGATGAAGTCCTGGGCCCTATCAACCAGGTCTACTTCACCA
TCAAGCCCCAGGAAGGAATTGTCGCGACCTCCTTCAAGCCTGGTGACAAG
GTCTACATTGGTGGCGACAAGCTCCTTCCCTTGGAGAAGTTCCTTCCCAA
GCCCAAGCCCGCTCCCGGTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTG
CCCGAGGCGGTCCCATGCGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCC
ATGCGTGGTGGTCGCGGCGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGG
TGGTGGCTTCCGTGGTGGTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGA
GGGGTGGTGGCAGAGGAGGACCTCGTGGTGGAGGCTTCCGAGGACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_15740ATCC64974_15740Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15740-T1ATCC64974_15740-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15740-T1.exon1ATCC64974_15740-T1.exon1Aspergillus niger N402exon
ATCC64974_15740-T1.exon2ATCC64974_15740-T1.exon2Aspergillus niger N402exon
ATCC64974_15740-T1.exon3ATCC64974_15740-T1.exon3Aspergillus niger N402exon
ATCC64974_15740-T1.exon4ATCC64974_15740-T1.exon4Aspergillus niger N402exon
ATCC64974_15740-T1.exon5ATCC64974_15740-T1.exon5Aspergillus niger N402exon
ATCC64974_15740-T1.exon6ATCC64974_15740-T1.exon6Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_15740-T1.cdsATCC64974_15740-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR038664
DBxrefInterPro:IPR007504
DBxrefPFAM:PF04410
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1359875..1360774 +
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