You are here

Home

ATCC64974_16000-T1, ATCC64974_16000-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_16000-T1
Unique NameATCC64974_16000-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1446741..1447965-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_16000-T1 ID=ATCC64974_16000-T1|Name=ATCC64974_16000-T1|organism=Aspergillus niger N402|type=mRNA|length=1225bp|location=Sequence derived from alignment at OGUI01000003.1:1446741..1447965- (Aspergillus niger N402)
ATGGCCTCAGTAGCTCGGTCGCTGGGCCGCTCGGCCTTCTTTATGGCCCG
GAGAGGGCCTATCGTCACCCCCTTCCGCCAATTCTCCGTGACGCCCATTT
CCCTCGTCTCTGAAGATCCGCCCGTCCCTGAGGAGCCCAAGCGCCCTCGT
CCGCAGGACCTGCCCCCGGCACCCGAATACTCGCCCGATTTCCTCTCGAA
AGAGGAGCGGGAGCAATATGACTTGATGTCTCCGGAAGAGCGACAGGAGT
TCGACGAAGCGAACCGTGCTCTTGTTTCCGAATACAACGACCCCGAGGCC
CGTGCCGCCATGTTCGCCGAGCTCGACAAGGAAGTCTTCCAGATCGAAAG
ACAAACATATCTGCGATTCGAGGAACCGAAAATCAGATCGAACGGATTCT
GGGCGGAAGACGAACCAGACGATTTGGCTCTCGTCGAGGACGGTGATGAG
GATTTCAACGATGACGAAATGACGAGCATGGCCTACGCACAACTCGAACA
GCATCGTGAAATCAGAGAATACGCTCGAATCGCCGCTTGGGATATGCCAT
TGCTGAGCAGTACGCAGTCACCCACATACCACATAGTCTCCCCTCCATGC
CAGACATGATCCCTTTTGCTGATAAACCGCACTAGAGCTCGCCAAACCCT
TCACTCTCCCTCCCGAATCTCACATCCTCCGCTTCCGCTACACGACATAC
ATGGGCGAGCAGCACCCCGCCGAACCCAAGGTCGTCGTGGAGCTGTCGTC
CAAAGATCTGACCCCCAAATACCTCACCGAAGCGCAACGCCAGACCTTCC
TTAAACTCGTCGGTGTCCGCTACAACCCCCAAACCGATATTGTGCGCATG
TCCTGCGAGAAATTCCCGCTTCGCGCCCAAAACAAGCGCTACCTTGGTGA
CACCATCAAGTCGTTGATCAAGGAAGCGAAGGAGGGTGACTCATTCGCCG
ACATCCCTCTCGATCTGCGTCACCACAAGCCCAAGGTTACGCGCCGCTTC
CCTGAGTCCTGGGTTATGACGCCCGAGCGCAAGAAGCAGCTGGAGGCCAC
TCGTGCTGAGAGACAGCGTCAGCAGCAGGAGCGGGTGGACGGCAACAAGG
TCGTTCTGCAGGCGGCGCGGACCCTGCCGGCTTTGAACCCTGCGTTGAAC
GCAAAGGCCACGGAAGAGCGGGAGAAGGTTGCGGTGAAGGTCAATGCGAA
GGCTCAGAAGAAGAGGGTTCGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:1446741..1447965-

>ATCC64974_16000-T1 ID=ATCC64974_16000-T1|Name=ATCC64974_16000-T1|organism=Aspergillus niger N402|type=CDS|length=2298bp|location=Sequence derived from alignment at OGUI01000003.1:1446741..1447965- (Aspergillus niger N402)
AGCTCGCCAAACCCTTCACTCTCCCTCCCGAATCTCACATCCTCCGCTTC
CGCTACACGACATACATGGGCGAGCAGCACCCCGCCGAACCCAAGGTCGT
CGTGGAGCTGTCGTCCAAAGATCTGACCCCCAAATACCTCACCGAAGCGC
AACGCCAGACCTTCCTTAAACTCGTCGGTGTCCGCTACAACCCCCAAACC
GATATTGTGCGCATGTCCTGCGAGAAATTCCCGCTTCGCGCCCAAAACAA
GCGCTACCTTGGTGACACCATCAAGTCGTTGATCAAGGAAGCGAAGGAGG
GTGACTCATTCGCCGACATCCCTCTCGATCTGCGTCACCACAAGCCCAAG
GTTACGCGCCGCTTCCCTGAGTCCTGGGTTATGACGCCCGAGCGCAAGAA
GCAGCTGGAGGCCACTCGTGCTGAGAGACAGCGTCAGCAGCAGGAGCGGG
TGGACGGCAACAAGGTCGTTCTGCAGGCGGCGCGGACCCTGCCGGCTTTG
AACCCTGCGTTGAACGCAAAGGCCACGGAAGAGCGGGAGAAGGTTGCGGT
GAAGGTCAATGCGAAGGCTCAGAAGAAGAGGGTTCGGTGAATGGCCTCAG
TAGCTCGGTCGCTGGGCCGCTCGGCCTTCTTTATGGCCCGGAGAGGGCCT
ATCGTCACCCCCTTCCGCCAATTCTCCGTGACGCCCATTTCCCTCGTCTC
TGAAGATCCGCCCGTCCCTGAGGAGCCCAAGCGCCCTCGTCCGCAGGACC
TGCCCCCGGCACCCGAATACTCGCCCGATTTCCTCTCGAAAGAGGAGCGG
GAGCAATATGACTTGATGTCTCCGGAAGAGCGACAGGAGTTCGACGAAGC
GAACCGTGCTCTTGTTTCCGAATACAACGACCCCGAGGCCCGTGCCGCCA
TGTTCGCCGAGCTCGACAAGGAAGTCTTCCAGATCGAAAGACAAACATAT
CTGCGATTCGAGGAACCGAAAATCAGATCGAACGGATTCTGGGCGGAAGA
CGAACCAGACGATTTGGCTCTCGTCGAGGACGGTGATGAGGATTTCAACG
ATGACGAAATGACGAGCATGGCCTACGCACAACTCGAACAGCATCGTGAA
ATCAGAGAATACGCTCGAATCGCCGCTTGGGATATGCCATTGCTGAGCAA
GCTCGCCAAACCCTTCACTCTCCCTCCCGAATCTCACATCCTCCGCTTCC
GCTACACGACATACATGGGCGAGCAGCACCCCGCCGAACCCAAGGTCGTC
GTGGAGCTGTCGTCCAAAGATCTGACCCCCAAATACCTCACCGAAGCGCA
ACGCCAGACCTTCCTTAAACTCGTCGGTGTCCGCTACAACCCCCAAACCG
ATATTGTGCGCATGTCCTGCGAGAAATTCCCGCTTCGCGCCCAAAACAAG
CGCTACCTTGGTGACACCATCAAGTCGTTGATCAAGGAAGCGAAGGAGGG
TGACTCATTCGCCGACATCCCTCTCGATCTGCGTCACCACAAGCCCAAGG
TTACGCGCCGCTTCCCTGAGTCCTGGGTTATGACGCCCGAGCGCAAGAAG
CAGCTGGAGGCCACTCGTGCTGAGAGACAGCGTCAGCAGCAGGAGCGGGT
GGACGGCAACAAGGTCGTTCTGCAGGCGGCGCGGACCCTGCCGGCTTTGA
ACCCTGCGTTGAACGCAAAGGCCACGGAAGAGCGGGAGAAGGTTGCGGTG
AAGGTCAATGCGAAGGCTCAGAAGAAGAGGGTTCGGTGAATGGCCTCAGT
AGCTCGGTCGCTGGGCCGCTCGGCCTTCTTTATGGCCCGGAGAGGGCCTA
TCGTCACCCCCTTCCGCCAATTCTCCGTGACGCCCATTTCCCTCGTCTCT
GAAGATCCGCCCGTCCCTGAGGAGCCCAAGCGCCCTCGTCCGCAGGACCT
GCCCCCGGCACCCGAATACTCGCCCGATTTCCTCTCGAAAGAGGAGCGGG
AGCAATATGACTTGATGTCTCCGGAAGAGCGACAGGAGTTCGACGAAGCG
AACCGTGCTCTTGTTTCCGAATACAACGACCCCGAGGCCCGTGCCGCCAT
GTTCGCCGAGCTCGACAAGGAAGTCTTCCAGATCGAAAGACAAACATATC
TGCGATTCGAGGAACCGAAAATCAGATCGAACGGATTCTGGGCGGAAGAC
GAACCAGACGATTTGGCTCTCGTCGAGGACGGTGATGAGGATTTCAACGA
TGACGAAATGACGAGCATGGCCTACGCACAACTCGAACAGCATCGTGAAA
TCAGAGAATACGCTCGAATCGCCGCTTGGGATATGCCATTGCTGAGCA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_16000ATCC64974_16000Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16000-T1ATCC64974_16000-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16000-T1.cdsATCC64974_16000-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_16000-T1.exon2ATCC64974_16000-T1.exon2Aspergillus niger N402exon
ATCC64974_16000-T1.exon1ATCC64974_16000-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264KIV
DBxrefInterPro:IPR019349
DBxrefPFAM:PF10213
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1446741..1447965 -
Powered by Drupal