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ATCC64974_17550-T1, ATCC64974_17550-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_17550-T1
Unique NameATCC64974_17550-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:1917632..1918815-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_17550-T1 ID=ATCC64974_17550-T1|Name=ATCC64974_17550-T1|organism=Aspergillus niger N402|type=mRNA|length=1184bp|location=Sequence derived from alignment at OGUI01000003.1:1917632..1918815- (Aspergillus niger N402)
ATGCCTGAGCTAGCGGAAGTCTCGCGTATAGTCCATTTCCTTCGTCAACA
TCTTGTCGGCAAAACGCTTTCCAAGGTGTCAGTGCAAAACGATGACATTA
TCTACGGCAAAGCCGGCACTACTGCTGCCGAGTTTCAGAAGGCAATGGAA
GGGAAGAAAGTTACTGGTGCCGGACAGCAGGGCAAGTACTTCTGGATTGC
TATGTCATCACCACCCCATGCGGTTATGCATTTCGGTATGGCGGGCTGGC
TGAAAATCCGGGATGCCGACACCTATTACTACCGGACAGACAAACCTGGA
GATAAGGAGTGGCCGCCAAAATACTGGAAATTCTTGCTCGAAACCGAGGG
AGATCCAAAGACAGAAGCTGCTTTTGTTGACTTTCGCCGACTGGGCAGAA
TACGCCTGGTAGACTGTCCCGCGGAGGAAATCCGTAACTACAGCCCTCTG
AAAGAGAATGGCCCAGATCCTGTCGCCGATAAAGACATTGTGTCGGAGGA
GTGGCTAGCAAAGAAGCTCCGAAGCAAGAAGGTACCTGTGAAGGCGCTGC
TCCTTGATCAGGCGAATATCAGCGGAATAGGCAACTGGATGGGGTATGTT
CCTTAAGTCTCCCACCATGACTAATTATATCTAGCTGACTGCTTTCTAGC
GATGAGATCCTCTACCATGCTAAAATACACCCTGAGCAATACAGCAACAC
CTTGAATGACGACCAGATTAGAGAGCTGCACTCAGCGATACATTATATCT
GTTCCACCTCCGTAGAGCTTCTAGCAGATTCGGAGAAATTTCCAGCTGAC
TGGCTGTTCAAACATCGGTGGAGTAAAGGCAAGAAGAACACGCCATCTGT
GCTGCCAAACGGAGAAAAGATTACCTTTCTCACGGTAGGGGGCAGAACCA
GCGCAGTGGTTCCAAGTGTGCAGAAAAAGACTGGGCCAGTAGCCAAGGAC
GTCAGCAGTGAAGACGCCAGCAATGCGCCGGCAAACTCGAAGCGAAAGCG
GGCTTCAGTGAAAAAGGAGGAGAGCGAGCCGGAAGCTAGCGAAGAGGATA
CGAAGCCCAAGAAGACCGGGCCCAAAAGGCAAAGCAGAACTTCTGTCAAG
AAGGAAGACATCGATGAGACGGAGACTAAGCCGGTAGAAGAACAGCAAAC
TACCAGGAGACGCTCGGGCCGACTTCGAAAGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:1917632..1918815-

>ATCC64974_17550-T1 ID=ATCC64974_17550-T1|Name=ATCC64974_17550-T1|organism=Aspergillus niger N402|type=CDS|length=2256bp|location=Sequence derived from alignment at OGUI01000003.1:1917632..1918815- (Aspergillus niger N402)
CGATGAGATCCTCTACCATGCTAAAATACACCCTGAGCAATACAGCAACA
CCTTGAATGACGACCAGATTAGAGAGCTGCACTCAGCGATACATTATATC
TGTTCCACCTCCGTAGAGCTTCTAGCAGATTCGGAGAAATTTCCAGCTGA
CTGGCTGTTCAAACATCGGTGGAGTAAAGGCAAGAAGAACACGCCATCTG
TGCTGCCAAACGGAGAAAAGATTACCTTTCTCACGGTAGGGGGCAGAACC
AGCGCAGTGGTTCCAAGTGTGCAGAAAAAGACTGGGCCAGTAGCCAAGGA
CGTCAGCAGTGAAGACGCCAGCAATGCGCCGGCAAACTCGAAGCGAAAGC
GGGCTTCAGTGAAAAAGGAGGAGAGCGAGCCGGAAGCTAGCGAAGAGGAT
ACGAAGCCCAAGAAGACCGGGCCCAAAAGGCAAAGCAGAACTTCTGTCAA
GAAGGAAGACATCGATGAGACGGAGACTAAGCCGGTAGAAGAACAGCAAA
CTACCAGGAGACGCTCGGGCCGACTTCGAAAGTAGATGCCTGAGCTAGCG
GAAGTCTCGCGTATAGTCCATTTCCTTCGTCAACATCTTGTCGGCAAAAC
GCTTTCCAAGGTGTCAGTGCAAAACGATGACATTATCTACGGCAAAGCCG
GCACTACTGCTGCCGAGTTTCAGAAGGCAATGGAAGGGAAGAAAGTTACT
GGTGCCGGACAGCAGGGCAAGTACTTCTGGATTGCTATGTCATCACCACC
CCATGCGGTTATGCATTTCGGTATGGCGGGCTGGCTGAAAATCCGGGATG
CCGACACCTATTACTACCGGACAGACAAACCTGGAGATAAGGAGTGGCCG
CCAAAATACTGGAAATTCTTGCTCGAAACCGAGGGAGATCCAAAGACAGA
AGCTGCTTTTGTTGACTTTCGCCGACTGGGCAGAATACGCCTGGTAGACT
GTCCCGCGGAGGAAATCCGTAACTACAGCCCTCTGAAAGAGAATGGCCCA
GATCCTGTCGCCGATAAAGACATTGTGTCGGAGGAGTGGCTAGCAAAGAA
GCTCCGAAGCAAGAAGGTACCTGTGAAGGCGCTGCTCCTTGATCAGGCGA
ATATCAGCGGAATAGGCAACTGGATGGGCGATGAGATCCTCTACCATGCT
AAAATACACCCTGAGCAATACAGCAACACCTTGAATGACGACCAGATTAG
AGAGCTGCACTCAGCGATACATTATATCTGTTCCACCTCCGTAGAGCTTC
TAGCAGATTCGGAGAAATTTCCAGCTGACTGGCTGTTCAAACATCGGTGG
AGTAAAGGCAAGAAGAACACGCCATCTGTGCTGCCAAACGGAGAAAAGAT
TACCTTTCTCACGGTAGGGGGCAGAACCAGCGCAGTGGTTCCAAGTGTGC
AGAAAAAGACTGGGCCAGTAGCCAAGGACGTCAGCAGTGAAGACGCCAGC
AATGCGCCGGCAAACTCGAAGCGAAAGCGGGCTTCAGTGAAAAAGGAGGA
GAGCGAGCCGGAAGCTAGCGAAGAGGATACGAAGCCCAAGAAGACCGGGC
CCAAAAGGCAAAGCAGAACTTCTGTCAAGAAGGAAGACATCGATGAGACG
GAGACTAAGCCGGTAGAAGAACAGCAAACTACCAGGAGACGCTCGGGCCG
ACTTCGAAAGTAGATGCCTGAGCTAGCGGAAGTCTCGCGTATAGTCCATT
TCCTTCGTCAACATCTTGTCGGCAAAACGCTTTCCAAGGTGTCAGTGCAA
AACGATGACATTATCTACGGCAAAGCCGGCACTACTGCTGCCGAGTTTCA
GAAGGCAATGGAAGGGAAGAAAGTTACTGGTGCCGGACAGCAGGGCAAGT
ACTTCTGGATTGCTATGTCATCACCACCCCATGCGGTTATGCATTTCGGT
ATGGCGGGCTGGCTGAAAATCCGGGATGCCGACACCTATTACTACCGGAC
AGACAAACCTGGAGATAAGGAGTGGCCGCCAAAATACTGGAAATTCTTGC
TCGAAACCGAGGGAGATCCAAAGACAGAAGCTGCTTTTGTTGACTTTCGC
CGACTGGGCAGAATACGCCTGGTAGACTGTCCCGCGGAGGAAATCCGTAA
CTACAGCCCTCTGAAAGAGAATGGCCCAGATCCTGTCGCCGATAAAGACA
TTGTGTCGGAGGAGTGGCTAGCAAAGAAGCTCCGAAGCAAGAAGGTACCT
GTGAAGGCGCTGCTCCTTGATCAGGCGAATATCAGCGGAATAGGCAACTG
GATGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0003684damaged DNA binding
GO:0008270zinc ion binding
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_17550ATCC64974_17550Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17550-T1ATCC64974_17550-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17550-T1.cdsATCC64974_17550-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_17550-T1.exon2ATCC64974_17550-T1.exon2Aspergillus niger N402exon
ATCC64974_17550-T1.exon1ATCC64974_17550-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR010979
DBxrefInterPro:IPR035937
DBxrefInterPro:IPR015886
DBxrefInterPro:IPR012319
DBxrefPFAM:PF06831
DBxrefPFAM:PF01149
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:1917632..1918815 -
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